RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 MRPL32Q9BYC8 188 aaKnown RBP10.13□□□□□ -0.79
NEK3-210ENST00000620675 OR7C2O60412 319 aa10.13□□□□□ -0.79
NEK3-210ENST00000620675 CD5P06127 495 aa10.13□□□□□ -0.79
NEK3-210ENST00000620675 SEC11BP0C7V7 166 aa10.13□□□□□ -0.79
NEK3-210ENST00000620675 DEFB131AP59861 70 aa10.13□□□□□ -0.79
NEK3-210ENST00000620675 FAM74A1Q5RGS3 127 aa10.13□□□□□ -0.79
NEK3-210ENST00000620675 FXYD5Q96DB9 178 aa10.13□□□□□ -0.79
NEK3-210ENST00000620675 GPR82Q96P67 336 aa10.13□□□□□ -0.79
NEK3-210ENST00000620675 A0A087X0K7 114 aa10.12□□□□□ -0.79
NEK3-210ENST00000620675 A0A1W2PPV4 95 aa10.12□□□□□ -0.79
NEK3-210ENST00000620675 OR11H12B2RN74 326 aa10.12□□□□□ -0.79
NEK3-210ENST00000620675 ARL14EPLP0DKL9 152 aa10.12□□□□□ -0.79
NEK3-210ENST00000620675 PSMG4Q5JS54 123 aa10.12□□□□□ -0.79
NEK3-210ENST00000620675 AKR1C8PQ5T2L2 129 aa10.12□□□□□ -0.79
NEK3-210ENST00000620675 GTSCR1Q86UQ5 136 aa10.12□□□□□ -0.79
NEK3-210ENST00000620675 BLNKQ8WV28 456 aa10.12□□□□□ -0.79
NEK3-210ENST00000620675 SAT2Q96F10 170 aaPredicted RBP10.12□□□□□ -0.79
NEK3-210ENST00000620675 PAXXQ9BUH6 204 aa10.12□□□□□ -0.79
NEK3-210ENST00000620675 OR51M1Q9H341 326 aa10.12□□□□□ -0.79
NEK3-210ENST00000620675 HRH4Q9H3N8 390 aa10.12□□□□□ -0.79
NEK3-210ENST00000620675 NDUFB4O95168 129 aa10.11□□□□□ -0.79
NEK3-210ENST00000620675 FGF8P55075 233 aaPredicted RBP10.11□□□□□ -0.79
NEK3-210ENST00000620675 S100A7AQ86SG5 101 aa10.11□□□□□ -0.79
NEK3-210ENST00000620675 LINC00052Q96N35 136 aa10.11□□□□□ -0.79
NEK3-210ENST00000620675 TMEM14CQ9P0S9 112 aa10.11□□□□□ -0.79
NEK3-210ENST00000620675 HUWE1Q7Z6Z7 4374 aaKnown RBP10.11□□□□□ -0.79
NEK3-210ENST00000620675 MBP02144 154 aa10.11□□□□□ -0.79
NEK3-210ENST00000620675 STAG3L2P0CL84 134 aa10.11□□□□□ -0.79
NEK3-210ENST00000620675 STAG3L3P0CL85 134 aa10.11□□□□□ -0.79
NEK3-210ENST00000620675 S100A7P31151 101 aa10.11□□□□□ -0.79
NEK3-210ENST00000620675 GDF5OSQ5U4N7 250 aa10.11□□□□□ -0.79
NEK3-210ENST00000620675 ALKAL2Q6UX46 152 aa10.11□□□□□ -0.79
NEK3-210ENST00000620675 RNF141Q8WVD5 230 aa10.11□□□□□ -0.79
NEK3-210ENST00000620675 PHYHIPLQ96FC7 376 aa10.11□□□□□ -0.79
NEK3-210ENST00000620675 C16orf92Q96LL3 132 aa10.11□□□□□ -0.79
NEK3-210ENST00000620675 TMPRSS5Q9H3S3 457 aa10.11□□□□□ -0.79
NEK3-210ENST00000620675 TRBV19A0A075B6N1 114 aa10.1□□□□□ -0.79
NEK3-210ENST00000620675 TRAV2A0A0B4J234 112 aa10.1□□□□□ -0.79
NEK3-210ENST00000620675 F6UB75 175 aa10.1□□□□□ -0.79
NEK3-210ENST00000620675 IGHV4-30-4P0DP06 118 aa10.1□□□□□ -0.79
NEK3-210ENST00000620675 LCN15Q6UWW0 184 aa10.1□□□□□ -0.79
NEK3-210ENST00000620675 FAM213BQ8TBF2 198 aa10.1□□□□□ -0.79
NEK3-210ENST00000620675 ACTR3CQ9C0K3 210 aaPredicted RBP10.1□□□□□ -0.79
NEK3-210ENST00000620675 ZNF331Q9NQX6 463 aaPredicted RBP10.1□□□□□ -0.79
NEK3-210ENST00000620675 A0A1B0GV50 99 aa10.1□□□□□ -0.79
NEK3-210ENST00000620675 KNCNA6PVL3 124 aa10.1□□□□□ -0.79
NEK3-210ENST00000620675 ZNF705FA8MVS1 300 aaPredicted RBP10.1□□□□□ -0.79
NEK3-210ENST00000620675 HIST1H1EP10412 219 aaKnown RBP10.1□□□□□ -0.79
NEK3-210ENST00000620675 EIF5AP63241 154 aaKnown RBP10.1□□□□□ -0.79
NEK3-210ENST00000620675 UBE2L3P68036 154 aaKnown RBP10.1□□□□□ -0.79
NEK3-210ENST00000620675 KHDC3LQ587J8 217 aa10.1□□□□□ -0.79
NEK3-210ENST00000620675 EXOC3-AS1Q8N2X6 119 aa10.1□□□□□ -0.79
NEK3-210ENST00000620675 CTXND1A0A1B0GTU2 59 aa10.09□□□□□ -0.79
NEK3-210ENST00000620675 ISLRO14498 428 aa10.09□□□□□ -0.79
NEK3-210ENST00000620675 NBEAP1P0C6P0 100 aa10.09□□□□□ -0.79
NEK3-210ENST00000620675 ZNF705DP0CH99 300 aaPredicted RBP10.09□□□□□ -0.79
NEK3-210ENST00000620675 ZNF705BP0CI00 300 aaPredicted RBP10.09□□□□□ -0.79
NEK3-210ENST00000620675 DEFB121Q5J5C9 76 aa10.09□□□□□ -0.79
NEK3-210ENST00000620675 SRD5A3Q9H8P0 318 aa10.09□□□□□ -0.79
NEK3-210ENST00000620675 ZMAT5Q9UDW3 170 aaKnown RBP10.09□□□□□ -0.79
NEK3-210ENST00000620675 RBMY1BA6NDE4 496 aaKnown RBP10.08□□□□□ -0.8
NEK3-210ENST00000620675 RBMY1EA6NEQ0 496 aaKnown RBP10.08□□□□□ -0.8
NEK3-210ENST00000620675 M0R3E3 92 aa10.08□□□□□ -0.8
NEK3-210ENST00000620675 RBMY1DP0C7P1 496 aaKnown RBP10.08□□□□□ -0.8
NEK3-210ENST00000620675 TAS2R45P59539 299 aa10.08□□□□□ -0.8
NEK3-210ENST00000620675 MRAPQ8TCY5 172 aa10.08□□□□□ -0.8
NEK3-210ENST00000620675 PRAC2D3DTV9 90 aa10.08□□□□□ -0.8
NEK3-210ENST00000620675 GCHFRP30047 84 aa10.08□□□□□ -0.8
NEK3-210ENST00000620675 PSMB3P49720 205 aa10.08□□□□□ -0.8
NEK3-210ENST00000620675 MEOX2P50222 304 aa10.08□□□□□ -0.8
NEK3-210ENST00000620675 LRRC20Q8TCA0 184 aa10.08□□□□□ -0.8
NEK3-210ENST00000620675 MAP1LC3B2A6NCE7 125 aa10.07□□□□□ -0.8
NEK3-210ENST00000620675 SULT1A2P50226 295 aa10.07□□□□□ -0.8
NEK3-210ENST00000620675 SNRPD3P62318 126 aaKnown RBP10.07□□□□□ -0.8
NEK3-210ENST00000620675 PQLC2Q6ZP29 291 aa10.07□□□□□ -0.8
NEK3-210ENST00000620675 MAP1LC3BQ9GZQ8 125 aa10.07□□□□□ -0.8
NEK3-210ENST00000620675 RNF24Q9Y225 148 aa10.07□□□□□ -0.8
NEK3-210ENST00000620675 STAB2Q8WWQ8 2551 aa10.07□□□□□ -0.8
NEK3-210ENST00000620675 UMAD1C9J7I0 102 aa10.06□□□□□ -0.8
NEK3-210ENST00000620675 FRMD6-AS1P0C7T7 363 aa10.06□□□□□ -0.8
NEK3-210ENST00000620675 C4BPBP20851 252 aa10.06□□□□□ -0.8
NEK3-210ENST00000620675 RANP62826 216 aaKnown RBP10.06□□□□□ -0.8
NEK3-210ENST00000620675 ACTL10Q5JWF8 245 aa10.06□□□□□ -0.8
NEK3-210ENST00000620675 IQCF2Q8IXL9 164 aa10.06□□□□□ -0.8
NEK3-210ENST00000620675 RPL35AP18077 110 aaKnown RBP10.06□□□□□ -0.8
NEK3-210ENST00000620675 ID1P41134 155 aa10.06□□□□□ -0.8
NEK3-210ENST00000620675 PSG3Q16557 428 aa10.06□□□□□ -0.8
NEK3-210ENST00000620675 SFT2D1Q8WV19 159 aa10.06□□□□□ -0.8
NEK3-210ENST00000620675 FAM110AQ9BQ89 295 aa10.06□□□□□ -0.8
NEK3-210ENST00000620675 CCL20P78556 96 aa10.05□□□□□ -0.8
NEK3-210ENST00000620675 ICAM4Q14773 271 aa10.05□□□□□ -0.8
NEK3-210ENST00000620675 GUK1Q16774 197 aa10.05□□□□□ -0.8
NEK3-210ENST00000620675 ZNF738Q8NE65 137 aa10.05□□□□□ -0.8
NEK3-210ENST00000620675 SLC50A1Q9BRV3 221 aa10.05□□□□□ -0.8
NEK3-210ENST00000620675 TUBA4BQ9H853 241 aa10.05□□□□□ -0.8
NEK3-210ENST00000620675 CXorf1O96002 111 aa10.05□□□□□ -0.8
NEK3-210ENST00000620675 IGKV3-20P01619 116 aa10.05□□□□□ -0.8
NEK3-210ENST00000620675 PDE6HQ13956 83 aa10.05□□□□□ -0.8
NEK3-210ENST00000620675 SUN5Q8TC36 379 aa10.05□□□□□ -0.8
NEK3-210ENST00000620675 PCNPQ8WW12 178 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms