RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ZNF114Q8NC26 417 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 VSIG2Q96IQ7 327 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 NRTNQ99748 197 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 RPL15P61313 204 aaKnown RBP7.23□□□□□ -1.25
TTC28-208ENST00000612946 C12orf74Q32Q52 190 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 V9GYV3 84 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 hADV29S1A0JD25 119 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 UQCRQO14949 82 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 SAA1P0DJI8 122 aaPredicted RBP7.23□□□□□ -1.25
TTC28-208ENST00000612946 FGF6P10767 208 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 LINC00477Q96M19 166 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 BRWD3Q6RI45 1802 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.23□□□□□ -1.25
TTC28-208ENST00000612946 H3BT86 120 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 CMC4P56277 68 aaPredicted RBP7.23□□□□□ -1.25
TTC28-208ENST00000612946 FOXC1Q12948 553 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 LYZL1Q6UWQ5 148 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 PCNX3Q9H6A9 2034 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 VDAC2P45880 294 aaPredicted RBP7.23□□□□□ -1.25
TTC28-208ENST00000612946 PRR7Q8TB68 274 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 C20orf78Q9BR46 151 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 APELAP0DMC3 54 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 IL15RAQ13261 267 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 GATD1Q8NB37 220 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 IGKV1D-13A0A0B4J2D9 117 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 CDK2AP2O75956 126 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 IGKV1-13P0DP09 117 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 VSIRQ9H7M9 311 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 DEPPQ9NTK1 212 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 A0A0B4J2C4 111 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 PNRC2Q9NPJ4 139 aaKnown RBP7.22□□□□□ -1.25
TTC28-208ENST00000612946 NBR2O15453 112 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 HS3ST6Q96QI5 342 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 HCSTQ9UBK5 93 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 CXCL5P42830 114 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 ZNF138P52744 262 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 LILRA6Q6PI73 481 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 DSCR8Q96T75 97 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 H0YJW9 148 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 PAX4O43316 350 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 GLRXP35754 106 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 TMEM240Q5SV17 173 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 C20orf173Q96LM9 149 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 TRAV13-1A0A0B4J241 112 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 TCF15Q12870 199 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 C9orf139Q6ZV77 190 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 SCRT2Q9NQ03 307 aa7.22□□□□□ -1.25
TTC28-208ENST00000612946 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.21□□□□□ -1.25
TTC28-208ENST00000612946 TMEM14CQ9P0S9 112 aa7.21□□□□□ -1.25
TTC28-208ENST00000612946 FOXI1Q12951 378 aa7.21□□□□□ -1.25
TTC28-208ENST00000612946 SP7Q8TDD2 431 aaPredicted RBP7.21□□□□□ -1.25
TTC28-208ENST00000612946 MUC6Q6W4X9 2439 aa7.21□□□□□ -1.25
TTC28-208ENST00000612946 LOC102723996A0A087X1L8 192 aa7.21□□□□□ -1.25
TTC28-208ENST00000612946 PDE6GP18545 87 aa7.21□□□□□ -1.25
TTC28-208ENST00000612946 Q6ZT83 130 aa7.21□□□□□ -1.25
TTC28-208ENST00000612946 DUX3Q96PT4 197 aa7.21□□□□□ -1.25
TTC28-208ENST00000612946 LINC00158P58513 81 aa7.21□□□□□ -1.26
TTC28-208ENST00000612946 PTH2Q96A98 100 aa7.21□□□□□ -1.26
TTC28-208ENST00000612946 TTTY12Q9BZ98 90 aa7.21□□□□□ -1.26
TTC28-208ENST00000612946 DUX5Q96PT3 197 aa7.21□□□□□ -1.26
TTC28-208ENST00000612946 E9PQ18 207 aa7.21□□□□□ -1.26
TTC28-208ENST00000612946 ZNF319Q9P2F9 582 aa7.21□□□□□ -1.26
TTC28-208ENST00000612946 DPM3Q9P2X0 92 aa7.21□□□□□ -1.26
TTC28-208ENST00000612946 CD7P09564 240 aa7.21□□□□□ -1.26
TTC28-208ENST00000612946 CGB1A6NKQ9 187 aa7.21□□□□□ -1.26
TTC28-208ENST00000612946 ITLN1Q8WWA0 313 aa7.21□□□□□ -1.26
TTC28-208ENST00000612946 A0A0A6YYD4 124 aa7.21□□□□□ -1.26
TTC28-208ENST00000612946 PYYP10082 97 aa7.21□□□□□ -1.26
TTC28-208ENST00000612946 TMEM219Q86XT9 240 aa7.21□□□□□ -1.26
TTC28-208ENST00000612946 LYRM9A8MSI8 78 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 IGHG2P01859 326 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 GPHA2Q96T91 129 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 B9A039 149 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 NDUFC1O43677 76 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 DEFB123Q8N688 67 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 F6UB75 175 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 EGR2P11161 476 aaPredicted RBP7.2□□□□□ -1.26
TTC28-208ENST00000612946 BMPERQ8N8U9 685 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 TMEM52Q8NDY8 209 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 TMEM167AQ8TBQ9 72 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 C2CD3Q4AC94 2353 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 LOC101059948A0A1B0GTJ6 334 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 SPINK14Q6IE38 97 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 IGHV1-45A0A0A0MS14 117 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 CRYGSP22914 178 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 CT55Q8WUE5 264 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 RFNGQ9Y644 331 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 IGLL5B9A064 214 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 C9JQL5 133 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 H3BTX0 84 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 RHODO00212 210 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 ERCC8Q13216 396 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 FAM236AA0A1B0GUQ0 79 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 FAM236BA0A1B0GV22 79 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 TRPT1Q86TN4 253 aaKnown RBP7.2□□□□□ -1.26
TTC28-208ENST00000612946 TOMM7Q9P0U1 55 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 TAX1BP3O14907 124 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 SH2D1AO60880 128 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 CD55P08174 381 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 PMS2CLQ68D20 193 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 235.9 ms