RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 LINC01545Q5VT33 79 aa12.76□□□□□ -0.37
RTN1-209ENST00000611068 C20orf78Q9BR46 151 aa12.76□□□□□ -0.37
RTN1-209ENST00000611068 LRRK2Q5S007 2527 aa12.76□□□□□ -0.37
RTN1-209ENST00000611068 TNFRSF13BO14836 293 aaPredicted RBP12.75□□□□□ -0.37
RTN1-209ENST00000611068 CATR1Q13166 79 aa12.75□□□□□ -0.37
RTN1-209ENST00000611068 DIAPH2-AS1Q14236 149 aa12.75□□□□□ -0.37
RTN1-209ENST00000611068 ZNF714Q96N38 554 aa12.75□□□□□ -0.37
RTN1-209ENST00000611068 K7ERJ3 54 aa12.75□□□□□ -0.37
RTN1-209ENST00000611068 RAB1BQ9H0U4 201 aa12.75□□□□□ -0.37
RTN1-209ENST00000611068 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.75□□□□□ -0.37
RTN1-209ENST00000611068 P0C879 139 aa12.75□□□□□ -0.37
RTN1-209ENST00000611068 DDB2Q92466 427 aa12.75□□□□□ -0.37
RTN1-209ENST00000611068 INSIG2Q9Y5U4 225 aa12.75□□□□□ -0.37
RTN1-209ENST00000611068 LINC00312Q9Y6C7 94 aa12.75□□□□□ -0.37
RTN1-209ENST00000611068 B5MCH6 92 aa12.74□□□□□ -0.37
RTN1-209ENST00000611068 C8orf86Q6ZUL3 223 aa12.74□□□□□ -0.37
RTN1-209ENST00000611068 IGFBPL1Q8WX77 278 aa12.74□□□□□ -0.37
RTN1-209ENST00000611068 IGF2BP2-AS1Q96M15 143 aa12.74□□□□□ -0.37
RTN1-209ENST00000611068 LINC00479Q96M42 142 aa12.74□□□□□ -0.37
RTN1-209ENST00000611068 FAM110AQ9BQ89 295 aa12.74□□□□□ -0.37
RTN1-209ENST00000611068 HIF1ANQ9NWT6 349 aa12.74□□□□□ -0.37
RTN1-209ENST00000611068 HSPB8Q9UJY1 196 aa12.74□□□□□ -0.37
RTN1-209ENST00000611068 ERG28Q9UKR5 140 aa12.74□□□□□ -0.37
RTN1-209ENST00000611068 WNK2Q9Y3S1 2297 aa12.74□□□□□ -0.37
RTN1-209ENST00000611068 MT-ATP8P03928 68 aa12.74□□□□□ -0.37
RTN1-209ENST00000611068 SPINK8P0C7L1 97 aa12.74□□□□□ -0.37
RTN1-209ENST00000611068 RASL11AQ6T310 242 aa12.74□□□□□ -0.37
RTN1-209ENST00000611068 SRSF8Q9BRL6 282 aaKnown RBP12.74□□□□□ -0.37
RTN1-209ENST00000611068 DOPEY1Q5JWR5 2465 aa12.73□□□□□ -0.37
RTN1-209ENST00000611068 A1L4Q6 167 aa12.73□□□□□ -0.37
RTN1-209ENST00000611068 ACTL6BO94805 426 aa12.73□□□□□ -0.37
RTN1-209ENST00000611068 AREGP15514 252 aa12.73□□□□□ -0.37
RTN1-209ENST00000611068 CHCHD1Q96BP2 118 aaKnown RBP12.73□□□□□ -0.37
RTN1-209ENST00000611068 RPUSD1Q9UJJ7 312 aaKnown RBP12.73□□□□□ -0.37
RTN1-209ENST00000611068 TRAV3A0A0B4J244 114 aa12.73□□□□□ -0.37
RTN1-209ENST00000611068 LIPFP07098 398 aa12.73□□□□□ -0.37
RTN1-209ENST00000611068 PSG5Q15238 335 aa12.73□□□□□ -0.37
RTN1-209ENST00000611068 RTL8BQ17RB0 113 aa12.73□□□□□ -0.37
RTN1-209ENST00000611068 C11orf71Q6IPW1 123 aa12.73□□□□□ -0.37
RTN1-209ENST00000611068 TEPPQ6URK8 271 aa12.73□□□□□ -0.37
RTN1-209ENST00000611068 MIR17HGQ75NE6 70 aa12.73□□□□□ -0.37
RTN1-209ENST00000611068 H2BFWTQ7Z2G1 175 aa12.73□□□□□ -0.37
RTN1-209ENST00000611068 SMIM20Q8N5G0 67 aa12.73□□□□□ -0.37
RTN1-209ENST00000611068 C1orf159Q96HA4 380 aa12.73□□□□□ -0.37
RTN1-209ENST00000611068 HSD17B10Q99714 261 aaKnown RBP12.73□□□□□ -0.37
RTN1-209ENST00000611068 HINT2Q9BX68 163 aa12.73□□□□□ -0.37
RTN1-209ENST00000611068 HIGD1CA8MV81 97 aa12.72□□□□□ -0.37
RTN1-209ENST00000611068 GGTLC3B5MD39 225 aa12.72□□□□□ -0.37
RTN1-209ENST00000611068 BOD1L2Q8IYS8 172 aa12.72□□□□□ -0.37
RTN1-209ENST00000611068 ZBTB34Q8NCN2 500 aa12.72□□□□□ -0.37
RTN1-209ENST00000611068 OR4A16Q8NH70 328 aa12.72□□□□□ -0.37
RTN1-209ENST00000611068 F11RQ9Y624 299 aaKnown RBP12.72□□□□□ -0.37
RTN1-209ENST00000611068 SIVA1O15304 175 aa12.72□□□□□ -0.37
RTN1-209ENST00000611068 GPR82Q96P67 336 aa12.72□□□□□ -0.37
RTN1-209ENST00000611068 S1PR3Q99500 378 aa12.72□□□□□ -0.37
RTN1-209ENST00000611068 A0A1B0GW15 77 aa12.71□□□□□ -0.37
RTN1-209ENST00000611068 OR9G9P0C7N8 305 aa12.71□□□□□ -0.37
RTN1-209ENST00000611068 MYOD1P15172 320 aa12.71□□□□□ -0.37
RTN1-209ENST00000611068 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
RTN1-209ENST00000611068 CDIP1Q9H305 208 aa12.71□□□□□ -0.37
RTN1-209ENST00000611068 K7EMI3 77 aa12.71□□□□□ -0.38
RTN1-209ENST00000611068 IGKV1-16P04430 117 aa12.71□□□□□ -0.38
RTN1-209ENST00000611068 SMIM13P0DJ93 91 aa12.71□□□□□ -0.38
RTN1-209ENST00000611068 A0A1W2PRD5 423 aa12.7□□□□□ -0.38
RTN1-209ENST00000611068 A0A1W2PRF3 423 aa12.7□□□□□ -0.38
RTN1-209ENST00000611068 A0A1W2PRM7 423 aa12.7□□□□□ -0.38
RTN1-209ENST00000611068 H3BMG7 143 aa12.7□□□□□ -0.38
RTN1-209ENST00000611068 SMAD7O15105 426 aaKnown RBP12.7□□□□□ -0.38
RTN1-209ENST00000611068 FXYD2P54710 66 aa12.7□□□□□ -0.38
RTN1-209ENST00000611068 ADTRPQ96IZ2 230 aa12.7□□□□□ -0.38
RTN1-209ENST00000611068 TMUB1Q9BVT8 246 aa12.7□□□□□ -0.38
RTN1-209ENST00000611068 POLQO75417 2590 aa12.7□□□□□ -0.38
RTN1-209ENST00000611068 IGHV3-72A0A0B4J1Y9 119 aa12.7□□□□□ -0.38
RTN1-209ENST00000611068 CSN3P07498 182 aa12.7□□□□□ -0.38
RTN1-209ENST00000611068 COX7A1P24310 79 aa12.7□□□□□ -0.38
RTN1-209ENST00000611068 VDAC2P45880 294 aaPredicted RBP12.7□□□□□ -0.38
RTN1-209ENST00000611068 PCP2Q8IVA1 136 aa12.7□□□□□ -0.38
RTN1-209ENST00000611068 ZNF843Q8N446 348 aa12.7□□□□□ -0.38
RTN1-209ENST00000611068 OR10X1Q8NGY0 326 aa12.7□□□□□ -0.38
RTN1-209ENST00000611068 GTSF1Q8WW33 167 aa12.7□□□□□ -0.38
RTN1-209ENST00000611068 ONECUT1Q9UBC0 465 aa12.7□□□□□ -0.38
RTN1-209ENST00000611068 CHD6Q8TD26 2715 aa12.69□□□□□ -0.38
RTN1-209ENST00000611068 A0A1B0GXF2 115 aa12.69□□□□□ -0.38
RTN1-209ENST00000611068 F8W1H4 67 aa12.69□□□□□ -0.38
RTN1-209ENST00000611068 CLEC3BP05452 202 aa12.69□□□□□ -0.38
RTN1-209ENST00000611068 GAGE5Q13069 117 aa12.69□□□□□ -0.38
RTN1-209ENST00000611068 GAGE6Q13070 117 aa12.69□□□□□ -0.38
RTN1-209ENST00000611068 CT45A6P0DMU7 189 aa12.69□□□□□ -0.38
RTN1-209ENST00000611068 CT45A5P0DMU8 189 aa12.69□□□□□ -0.38
RTN1-209ENST00000611068 CT45A7P0DMV0 189 aa12.69□□□□□ -0.38
RTN1-209ENST00000611068 FAM162BQ5T6X4 162 aa12.69□□□□□ -0.38
RTN1-209ENST00000611068 AMTNQ6UX39 209 aa12.69□□□□□ -0.38
RTN1-209ENST00000611068 SLC25A48Q6ZT89 311 aaKnown RBP12.69□□□□□ -0.38
RTN1-209ENST00000611068 NRGNQ92686 78 aa12.69□□□□□ -0.38
RTN1-209ENST00000611068 MRPL20Q9BYC9 149 aaKnown RBP12.69□□□□□ -0.38
RTN1-209ENST00000611068 KAAG1Q9UBP8 84 aa12.69□□□□□ -0.38
RTN1-209ENST00000611068 MPDU1O75352 247 aa12.68□□□□□ -0.38
RTN1-209ENST00000611068 OR5AL1P0C617 328 aa12.68□□□□□ -0.38
RTN1-209ENST00000611068 ZNF137PP52743 207 aa12.68□□□□□ -0.38
RTN1-209ENST00000611068 RPL32P62910 135 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms