RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 FRYLO94915 3013 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 NCKAP5O14513 1909 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 TRAV8-6A0A0B4J262 113 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 PRSS47A8MTI9 375 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 K7ERU9 68 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 FAM106CPP0CH98 169 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 SAPCD1Q5SSQ6 148 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 AMMECR1LQ6DCA0 310 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 EBLN2Q6P2I7 272 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 RASL11AQ6T310 242 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 LYZL1Q6UWQ5 148 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 Q86TA4 180 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 AMN1Q8IY45 258 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 MYOZ3Q8TDC0 251 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 C16orf92Q96LL3 132 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 LINC00527Q9UJ94 153 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 EXPH5Q8NEV8 1989 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 A1L4Q6 167 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 SMIM17P0DL12 118 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 PSG9Q00887 426 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 LINC00173Q6ZV60 143 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 Q8N7P7 452 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 CHCHD1Q96BP2 118 aaKnown RBP5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 TMEM160Q9NX00 188 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 TP53TG3Q9ULZ0 132 aa5.5□□□□□ -1.53
SYNPO2-206ENST00000610556 TMEM213A2RRL7 107 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 PRSS46E5RG02 174 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 TEX36Q5VZQ5 186 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 CLEC19AQ6UXS0 136 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 ST20Q9HBF5 79 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 DYSFO75923 2080 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 NCOR2Q9Y618 2525 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 C22orf46C9J442 243 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 H3BUT2 72 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 HTN1P15515 57 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 CEACAM8P31997 349 aaPredicted RBP5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 IFI27P40305 119 aaPredicted RBP5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 PET117Q6UWS5 81 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 IGLC7A0M8Q6 106 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 M0R381 172 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 CGB3P0DN86 165 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 CGB7P0DN87 165 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 PVRIGQ6DKI7 326 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 SCGB1D4Q6XE38 83 aa5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 COL25A1Q9BXS0 654 aaPredicted RBP5.49□□□□□ -1.53
SYNPO2-206ENST00000610556 IGHV1-24A0A0C4DH33 117 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 LY6EQ16553 131 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 FAM231DQ6ZW35 169 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 METTL26Q96S19 204 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 FOXC2Q99958 501 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 PEF1Q9UBV8 284 aaKnown RBP5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 SPENQ96T58 3664 aaKnown RBP5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 DLX6P56179 175 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 KHDC1LQ5JSQ8 128 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 DEFB104AQ8WTQ1 72 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 C8orf49Q96NF6 230 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 IGLC1P0CG04 106 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 PF4V1P10720 104 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 UBE2V1Q13404 147 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 GUSBP1Q15486 140 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 PRSS33Q8NF86 280 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 TNFRSF14Q92956 283 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 IFI27L1Q96BM0 104 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 IGF2BP2-AS1Q96M15 143 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 RNF114Q9Y508 228 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 COX11Q9Y6N1 276 aa5.48□□□□□ -1.53
SYNPO2-206ENST00000610556 SH2D1AO60880 128 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 LEPP41159 167 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 RPS20P60866 119 aaKnown RBP5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 PSG3Q16557 428 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 Q6AWC8 147 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 SP5Q6BEB4 398 aaPredicted RBP5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 IGFL2Q6UWQ7 119 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 ZNF502Q8TBZ5 544 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 TP73-AS1Q9UF72 201 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 IGLV2-8P01709 118 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 HBDP02042 147 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 FABP2P12104 132 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 RHOGP84095 191 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 CR1LQ2VPA4 569 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 ZC2HC1AQ96GY0 325 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 C1orf159Q96HA4 380 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 SHANK2-AS3Q9BTD1 123 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 MRPS16Q9Y3D3 137 aaKnown RBP5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 FABP5P3A8MUU1 101 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 COL5A1P20908 1838 aaPredicted RBP5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 SRSF9Q13242 221 aaKnown RBP eCLIP5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 C5orf64Q2M2E5 130 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 THAP8Q8NA92 274 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 GLMPQ8WWB7 406 aa5.47□□□□□ -1.53
SYNPO2-206ENST00000610556 TRBV19A0A075B6N1 114 aa5.46□□□□□ -1.53
SYNPO2-206ENST00000610556 IGHV3-11P01762 117 aa5.46□□□□□ -1.53
SYNPO2-206ENST00000610556 PLP1P60201 277 aa5.46□□□□□ -1.53
SYNPO2-206ENST00000610556 HIST1H1AQ02539 215 aaPredicted RBP5.46□□□□□ -1.53
SYNPO2-206ENST00000610556 C15orf32Q32M92 178 aa5.46□□□□□ -1.53
SYNPO2-206ENST00000610556 PIP4P1Q86T03 277 aa5.46□□□□□ -1.53
SYNPO2-206ENST00000610556 ARHGAP32A7KAX9 2087 aa5.46□□□□□ -1.53
SYNPO2-206ENST00000610556 ANKRD11Q6UB99 2663 aaPredicted RBP5.46□□□□□ -1.53
SYNPO2-206ENST00000610556 IGKV3-20P01619 116 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms