RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 LYSTQ99698 3801 aa17.18■□□□□ 0.34
SSX2IP-209ENST00000603677 UBE2L5PA0A1B0GUS4 154 aa17.18■□□□□ 0.34
SSX2IP-209ENST00000603677 ZNF705FA8MVS1 300 aaPredicted RBP17.18■□□□□ 0.34
SSX2IP-209ENST00000603677 ZNF705DP0CH99 300 aaPredicted RBP17.18■□□□□ 0.34
SSX2IP-209ENST00000603677 ZNF705BP0CI00 300 aaPredicted RBP17.18■□□□□ 0.34
SSX2IP-209ENST00000603677 CXCL3P19876 107 aa17.18■□□□□ 0.34
SSX2IP-209ENST00000603677 RBMY1A1P0DJD3 496 aaKnown RBP17.17■□□□□ 0.34
SSX2IP-209ENST00000603677 RBMY1CP0DJD4 496 aa17.17■□□□□ 0.34
SSX2IP-209ENST00000603677 RBMY1FQ15415 496 aaKnown RBP17.17■□□□□ 0.34
SSX2IP-209ENST00000603677 PSG3Q16557 428 aa17.17■□□□□ 0.34
SSX2IP-209ENST00000603677 MIC13Q5XKP0 118 aa17.17■□□□□ 0.34
SSX2IP-209ENST00000603677 OR5C1Q8NGR4 320 aa17.17■□□□□ 0.34
SSX2IP-209ENST00000603677 GOLT1BQ9Y3E0 138 aa17.17■□□□□ 0.34
SSX2IP-209ENST00000603677 PXMP4Q9Y6I8 212 aa17.17■□□□□ 0.34
SSX2IP-209ENST00000603677 TEX48A0A1B0GUV7 120 aa17.16■□□□□ 0.34
SSX2IP-209ENST00000603677 MPC2O95563 127 aa17.16■□□□□ 0.34
SSX2IP-209ENST00000603677 FGF7P21781 194 aa17.16■□□□□ 0.34
SSX2IP-209ENST00000603677 NHLH2Q02577 135 aa17.16■□□□□ 0.34
SSX2IP-209ENST00000603677 ZNF738Q8NE65 137 aa17.16■□□□□ 0.34
SSX2IP-209ENST00000603677 ZNF331Q9NQX6 463 aaPredicted RBP17.16■□□□□ 0.34
SSX2IP-209ENST00000603677 OR5AC2Q9NZP5 309 aa17.16■□□□□ 0.34
SSX2IP-209ENST00000603677 F6UB75 175 aa17.15■□□□□ 0.34
SSX2IP-209ENST00000603677 H0YIZ8 118 aa17.15■□□□□ 0.34
SSX2IP-209ENST00000603677 ZNF253O75346 499 aa17.15■□□□□ 0.34
SSX2IP-209ENST00000603677 IGKV3-20P01619 116 aa17.15■□□□□ 0.34
SSX2IP-209ENST00000603677 LRRC37A5PQ49AS3 106 aa17.15■□□□□ 0.34
SSX2IP-209ENST00000603677 AMTNQ6UX39 209 aa17.15■□□□□ 0.34
SSX2IP-209ENST00000603677 IGF2BP2-AS1Q96M15 143 aa17.15■□□□□ 0.34
SSX2IP-209ENST00000603677 NPCDR1Q9BY65 106 aa17.15■□□□□ 0.34
SSX2IP-209ENST00000603677 RYR3Q15413 4870 aa17.15■□□□□ 0.34
SSX2IP-209ENST00000603677 DYNC2H1Q8NCM8 4307 aaKnown RBP17.14■□□□□ 0.33
SSX2IP-209ENST00000603677 IGLC2P0DOY2 106 aa17.14■□□□□ 0.33
SSX2IP-209ENST00000603677 CNN1P51911 297 aaKnown RBP17.14■□□□□ 0.33
SSX2IP-209ENST00000603677 OR8A1Q8NGG7 326 aa17.14■□□□□ 0.33
SSX2IP-209ENST00000603677 TMEM14CQ9P0S9 112 aa17.14■□□□□ 0.33
SSX2IP-209ENST00000603677 RFNGQ9Y644 331 aa17.14■□□□□ 0.33
SSX2IP-209ENST00000603677 DEFB1P60022 68 aa17.13■□□□□ 0.33
SSX2IP-209ENST00000603677 NANOS2P60321 138 aaKnown RBP17.13■□□□□ 0.33
SSX2IP-209ENST00000603677 RNF126Q9BV68 326 aa17.13■□□□□ 0.33
SSX2IP-209ENST00000603677 SLC35B3Q9H1N7 401 aa17.13■□□□□ 0.33
SSX2IP-209ENST00000603677 C17orf112F2Z3M2 114 aa17.12■□□□□ 0.33
SSX2IP-209ENST00000603677 DEFB4AO15263 64 aa17.12■□□□□ 0.33
SSX2IP-209ENST00000603677 RNF182Q8N6D2 247 aa17.12■□□□□ 0.33
SSX2IP-209ENST00000603677 OR11H7Q8NGC8 314 aa17.12■□□□□ 0.33
SSX2IP-209ENST00000603677 C2CD4CQ8TF44 421 aa17.12■□□□□ 0.33
SSX2IP-209ENST00000603677 ASB13Q8WXK3 278 aa17.12■□□□□ 0.33
SSX2IP-209ENST00000603677 SAT2Q96F10 170 aaPredicted RBP17.12■□□□□ 0.33
SSX2IP-209ENST00000603677 PDE6HQ13956 83 aa17.11■□□□□ 0.33
SSX2IP-209ENST00000603677 WDR61Q9GZS3 305 aaKnown RBP17.11■□□□□ 0.33
SSX2IP-209ENST00000603677 HBE1P02100 147 aa17.1■□□□□ 0.33
SSX2IP-209ENST00000603677 LINC00476Q8WZB0 136 aa17.1■□□□□ 0.33
SSX2IP-209ENST00000603677 RPUSD4Q96CM3 377 aaKnown RBP17.1■□□□□ 0.33
SSX2IP-209ENST00000603677 ATP5SQ99766 215 aa17.1■□□□□ 0.33
SSX2IP-209ENST00000603677 PARD6GQ9BYG4 376 aaPredicted RBP17.1■□□□□ 0.33
SSX2IP-209ENST00000603677 HSPB11Q9Y547 144 aa17.1■□□□□ 0.33
SSX2IP-209ENST00000603677 TRAV10A0A0B4J240 114 aa17.09■□□□□ 0.33
SSX2IP-209ENST00000603677 INSP01308 110 aa17.09■□□□□ 0.33
SSX2IP-209ENST00000603677 HIST1H1EP10412 219 aaKnown RBP17.09■□□□□ 0.33
SSX2IP-209ENST00000603677 HLA-DMBP28068 263 aa17.09■□□□□ 0.33
SSX2IP-209ENST00000603677 RPL12P30050 165 aaKnown RBP17.09■□□□□ 0.33
SSX2IP-209ENST00000603677 MORN5Q5VZ52 161 aa17.09■□□□□ 0.33
SSX2IP-209ENST00000603677 IGFL4Q6B9Z1 124 aa17.09■□□□□ 0.33
SSX2IP-209ENST00000603677 TMEM256Q8N2U0 113 aa17.09■□□□□ 0.33
SSX2IP-209ENST00000603677 MRPL53Q96EL3 112 aaKnown RBP17.09■□□□□ 0.33
SSX2IP-209ENST00000603677 MRPL32Q9BYC8 188 aaKnown RBP17.09■□□□□ 0.33
SSX2IP-209ENST00000603677 PRELID1Q9Y255 219 aa17.09■□□□□ 0.33
SSX2IP-209ENST00000603677 ALG5Q9Y673 324 aa17.09■□□□□ 0.33
SSX2IP-209ENST00000603677 BOLA2-SMG1P6H3BVE0 249 aa17.08■□□□□ 0.32
SSX2IP-209ENST00000603677 SPART-AS1P0CW21 52 aa17.08■□□□□ 0.32
SSX2IP-209ENST00000603677 FXYD7P58549 80 aa17.08■□□□□ 0.32
SSX2IP-209ENST00000603677 CLINT1Q14677 625 aa17.08■□□□□ 0.32
SSX2IP-209ENST00000603677 RRN3P1Q2M238 152 aa17.08■□□□□ 0.32
SSX2IP-209ENST00000603677 C1orf158Q8N1D5 194 aa17.08■□□□□ 0.32
SSX2IP-209ENST00000603677 C20orf144Q9BQM9 153 aa17.08■□□□□ 0.32
SSX2IP-209ENST00000603677 PPP1R14DQ9NXH3 145 aa17.08■□□□□ 0.32
SSX2IP-209ENST00000603677 IFNA5P01569 189 aa17.07■□□□□ 0.32
SSX2IP-209ENST00000603677 HIST1H1AQ02539 215 aaPredicted RBP17.07■□□□□ 0.32
SSX2IP-209ENST00000603677 OR10J6PQ8NGY7 276 aa17.07■□□□□ 0.32
SSX2IP-209ENST00000603677 THAP6Q8TBB0 222 aa17.07■□□□□ 0.32
SSX2IP-209ENST00000603677 TMEM208Q9BTX3 173 aa17.07■□□□□ 0.32
SSX2IP-209ENST00000603677 H3BQ15 152 aa17.06■□□□□ 0.32
SSX2IP-209ENST00000603677 TSPOP30536 169 aa17.06■□□□□ 0.32
SSX2IP-209ENST00000603677 RHOBP62745 196 aa17.06■□□□□ 0.32
SSX2IP-209ENST00000603677 OXA1LQ15070 435 aa17.06■□□□□ 0.32
SSX2IP-209ENST00000603677 TRBV19A0A075B6N1 114 aa17.05■□□□□ 0.32
SSX2IP-209ENST00000603677 CRXO43186 299 aaPredicted RBP17.05■□□□□ 0.32
SSX2IP-209ENST00000603677 CDKN1BP46527 198 aa17.05■□□□□ 0.32
SSX2IP-209ENST00000603677 LGALS9CQ6DKI2 356 aa17.05■□□□□ 0.32
SSX2IP-209ENST00000603677 SCGB1C1Q8TD33 95 aa17.05■□□□□ 0.32
SSX2IP-209ENST00000603677 ODF3Q96PU9 254 aa17.05■□□□□ 0.32
SSX2IP-209ENST00000603677 MED28Q9H204 178 aa17.05■□□□□ 0.32
SSX2IP-209ENST00000603677 MBD2Q9UBB5 411 aa17.05■□□□□ 0.32
SSX2IP-209ENST00000603677 IGHV3OR16-12A0A075B7B8 117 aa17.04■□□□□ 0.32
SSX2IP-209ENST00000603677 TRAV5A0A0B4J249 113 aa17.04■□□□□ 0.32
SSX2IP-209ENST00000603677 SPINK13Q1W4C9 94 aa17.04■□□□□ 0.32
SSX2IP-209ENST00000603677 ZNF586Q9NXT0 402 aa17.04■□□□□ 0.32
SSX2IP-209ENST00000603677 SACSQ9NZJ4 4579 aa17.03■□□□□ 0.32
SSX2IP-209ENST00000603677 SLC17A3O00476 420 aa17.03■□□□□ 0.32
SSX2IP-209ENST00000603677 LOC102723971A0A1B0GUV8 181 aa17.02■□□□□ 0.32
SSX2IP-209ENST00000603677 M0R2Z0 102 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms