RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 ZNF705DP0CH99 300 aaPredicted RBP14.65□□□□□ -0.06
SSBP4-210ENST00000601444 ZNF705BP0CI00 300 aaPredicted RBP14.65□□□□□ -0.06
SSBP4-210ENST00000601444 SPP1P10451 314 aa14.65□□□□□ -0.06
SSBP4-210ENST00000601444 FFAR4Q5NUL3 377 aa14.65□□□□□ -0.06
SSBP4-210ENST00000601444 MORN3Q6PF18 240 aaPredicted RBP14.65□□□□□ -0.06
SSBP4-210ENST00000601444 MIR17HGQ75NE6 70 aa14.65□□□□□ -0.06
SSBP4-210ENST00000601444 LRRC20Q8TCA0 184 aa14.65□□□□□ -0.06
SSBP4-210ENST00000601444 PARD6GQ9BYG4 376 aaPredicted RBP14.65□□□□□ -0.06
SSBP4-210ENST00000601444 TNFSF18Q9UNG2 199 aa14.65□□□□□ -0.06
SSBP4-210ENST00000601444 A0A0J9YX75 114 aa14.64□□□□□ -0.07
SSBP4-210ENST00000601444 FXYD7P58549 80 aa14.64□□□□□ -0.07
SSBP4-210ENST00000601444 OR4B1Q8NGF8 309 aa14.64□□□□□ -0.07
SSBP4-210ENST00000601444 SAT2Q96F10 170 aaPredicted RBP14.64□□□□□ -0.07
SSBP4-210ENST00000601444 SLC25A2Q9BXI2 301 aa14.64□□□□□ -0.07
SSBP4-210ENST00000601444 HRH4Q9H3N8 390 aa14.64□□□□□ -0.07
SSBP4-210ENST00000601444 ZNF331Q9NQX6 463 aaPredicted RBP14.64□□□□□ -0.07
SSBP4-210ENST00000601444 KCNIP2Q9NS61 270 aa14.64□□□□□ -0.07
SSBP4-210ENST00000601444 ZNF586Q9NXT0 402 aa14.64□□□□□ -0.07
SSBP4-210ENST00000601444 DNAH7Q8WXX0 4024 aa14.63□□□□□ -0.07
SSBP4-210ENST00000601444 PYYP10082 97 aa14.63□□□□□ -0.07
SSBP4-210ENST00000601444 EBLN2Q6P2I7 272 aa14.63□□□□□ -0.07
SSBP4-210ENST00000601444 LCN15Q6UWW0 184 aa14.63□□□□□ -0.07
SSBP4-210ENST00000601444 INO80EQ8NBZ0 244 aaPredicted RBP14.63□□□□□ -0.07
SSBP4-210ENST00000601444 ZNF738Q8NE65 137 aa14.63□□□□□ -0.07
SSBP4-210ENST00000601444 FAM167A-AS1Q96KT0 104 aa14.63□□□□□ -0.07
SSBP4-210ENST00000601444 EIF3GO75821 320 aaKnown RBP eCLIP14.62□□□□□ -0.07
SSBP4-210ENST00000601444 PSG3Q16557 428 aa14.62□□□□□ -0.07
SSBP4-210ENST00000601444 CSNK1G2-AS1Q8NCQ2 148 aa14.62□□□□□ -0.07
SSBP4-210ENST00000601444 OR11H2Q8NH07 326 aa14.62□□□□□ -0.07
SSBP4-210ENST00000601444 SLC35B3Q9H1N7 401 aa14.62□□□□□ -0.07
SSBP4-210ENST00000601444 TMEM14CQ9P0S9 112 aa14.62□□□□□ -0.07
SSBP4-210ENST00000601444 XCL2Q9UBD3 114 aa14.62□□□□□ -0.07
SSBP4-210ENST00000601444 A0A0J9YWU9 116 aa14.61□□□□□ -0.07
SSBP4-210ENST00000601444 ZNF705FA8MVS1 300 aaPredicted RBP14.61□□□□□ -0.07
SSBP4-210ENST00000601444 CXCL2P19875 107 aa14.61□□□□□ -0.07
SSBP4-210ENST00000601444 HSD17B11Q8NBQ5 300 aa14.61□□□□□ -0.07
SSBP4-210ENST00000601444 RARRES2Q99969 163 aa14.61□□□□□ -0.07
SSBP4-210ENST00000601444 FUT9Q9Y231 359 aa14.61□□□□□ -0.07
SSBP4-210ENST00000601444 ARPC5O15511 151 aa14.6□□□□□ -0.07
SSBP4-210ENST00000601444 CNN1P51911 297 aaKnown RBP14.6□□□□□ -0.07
SSBP4-210ENST00000601444 ZNF266Q14584 549 aa14.6□□□□□ -0.07
SSBP4-210ENST00000601444 MUC7Q8TAX7 377 aa14.6□□□□□ -0.07
SSBP4-210ENST00000601444 SLC50A1Q9BRV3 221 aa14.6□□□□□ -0.07
SSBP4-210ENST00000601444 TRBV19A0A075B6N1 114 aa14.59□□□□□ -0.07
SSBP4-210ENST00000601444 NDUFB4O95168 129 aa14.59□□□□□ -0.07
SSBP4-210ENST00000601444 HIST1H1EP10412 219 aaKnown RBP14.59□□□□□ -0.07
SSBP4-210ENST00000601444 ATP6V0CP27449 155 aa14.59□□□□□ -0.07
SSBP4-210ENST00000601444 NUTF2P61970 127 aaKnown RBP14.59□□□□□ -0.07
SSBP4-210ENST00000601444 GUK1Q16774 197 aa14.59□□□□□ -0.07
SSBP4-210ENST00000601444 RPL7L1Q6DKI1 246 aaKnown RBP14.59□□□□□ -0.07
SSBP4-210ENST00000601444 Q6ZNX1 250 aa14.59□□□□□ -0.07
SSBP4-210ENST00000601444 OR11H4Q8NGC9 324 aa14.59□□□□□ -0.07
SSBP4-210ENST00000601444 BLNKQ8WV28 456 aa14.59□□□□□ -0.07
SSBP4-210ENST00000601444 RPUSD4Q96CM3 377 aaKnown RBP14.59□□□□□ -0.07
SSBP4-210ENST00000601444 CLUHP3Q96NS8 147 aa14.59□□□□□ -0.07
SSBP4-210ENST00000601444 MRPL32Q9BYC8 188 aaKnown RBP14.59□□□□□ -0.07
SSBP4-210ENST00000601444 TIMM9Q9Y5J7 89 aa14.59□□□□□ -0.07
SSBP4-210ENST00000601444 PRAC2D3DTV9 90 aa14.58□□□□□ -0.08
SSBP4-210ENST00000601444 OR10J4P0C629 311 aa14.58□□□□□ -0.08
SSBP4-210ENST00000601444 RAB2AP61019 212 aa14.58□□□□□ -0.08
SSBP4-210ENST00000601444 PSG9Q00887 426 aa14.58□□□□□ -0.08
SSBP4-210ENST00000601444 TMEM41BQ5BJD5 291 aa14.58□□□□□ -0.08
SSBP4-210ENST00000601444 AMTNQ6UX39 209 aa14.58□□□□□ -0.08
SSBP4-210ENST00000601444 ZNF503Q96F45 646 aa14.58□□□□□ -0.08
SSBP4-210ENST00000601444 MFFQ9GZY8 342 aa14.58□□□□□ -0.08
SSBP4-210ENST00000601444 SH3BGRL3Q9H299 93 aa14.58□□□□□ -0.08
SSBP4-210ENST00000601444 OR51M1Q9H341 326 aa14.58□□□□□ -0.08
SSBP4-210ENST00000601444 A8MTW9 85 aa14.57□□□□□ -0.08
SSBP4-210ENST00000601444 HIST1H1AQ02539 215 aaPredicted RBP14.57□□□□□ -0.08
SSBP4-210ENST00000601444 OR8A1Q8NGG7 326 aa14.57□□□□□ -0.08
SSBP4-210ENST00000601444 FXYD5Q96DB9 178 aa14.57□□□□□ -0.08
SSBP4-210ENST00000601444 DEFB4AO15263 64 aa14.56□□□□□ -0.08
SSBP4-210ENST00000601444 DUSP14O95147 198 aaKnown RBP14.56□□□□□ -0.08
SSBP4-210ENST00000601444 M6PRP20645 277 aa14.56□□□□□ -0.08
SSBP4-210ENST00000601444 RHOBP62745 196 aa14.56□□□□□ -0.08
SSBP4-210ENST00000601444 ACOT6Q3I5F7 207 aaPredicted RBP14.56□□□□□ -0.08
SSBP4-210ENST00000601444 ZFAND6Q6FIF0 208 aa14.56□□□□□ -0.08
SSBP4-210ENST00000601444 PAXXQ9BUH6 204 aa14.56□□□□□ -0.08
SSBP4-210ENST00000601444 C1QTNF4Q9BXJ3 329 aa14.56□□□□□ -0.08
SSBP4-210ENST00000601444 X6R8D5 127 aa14.56□□□□□ -0.08
SSBP4-210ENST00000601444 ZNF705EA8MWA4 302 aaPredicted RBP14.55□□□□□ -0.08
SSBP4-210ENST00000601444 OR7C2O60412 319 aa14.55□□□□□ -0.08
SSBP4-210ENST00000601444 ZNF253O75346 499 aa14.55□□□□□ -0.08
SSBP4-210ENST00000601444 NBEAP1P0C6P0 100 aa14.55□□□□□ -0.08
SSBP4-210ENST00000601444 FAM122CQ6P4D5 195 aa14.55□□□□□ -0.08
SSBP4-210ENST00000601444 EXOC3-AS1Q8N2X6 119 aa14.55□□□□□ -0.08
SSBP4-210ENST00000601444 OR10G4Q8NGN3 311 aa14.55□□□□□ -0.08
SSBP4-210ENST00000601444 OR10G9Q8NGN4 311 aa14.55□□□□□ -0.08
SSBP4-210ENST00000601444 OR10G7Q8NGN6 311 aa14.55□□□□□ -0.08
SSBP4-210ENST00000601444 RNF141Q8WVD5 230 aa14.55□□□□□ -0.08
SSBP4-210ENST00000601444 C3orf84H3BNL1 204 aa14.54□□□□□ -0.08
SSBP4-210ENST00000601444 M0R2Z0 102 aa14.54□□□□□ -0.08
SSBP4-210ENST00000601444 M0R3E3 92 aa14.54□□□□□ -0.08
SSBP4-210ENST00000601444 HMGB3O15347 200 aaKnown RBP14.54□□□□□ -0.08
SSBP4-210ENST00000601444 SPINK13Q1W4C9 94 aa14.54□□□□□ -0.08
SSBP4-210ENST00000601444 OR2G3Q8NGZ4 309 aa14.54□□□□□ -0.08
SSBP4-210ENST00000601444 ST6GAL2Q96JF0 529 aa14.54□□□□□ -0.08
SSBP4-210ENST00000601444 PSMG3Q9BT73 122 aaPredicted RBP14.54□□□□□ -0.08
SSBP4-210ENST00000601444 CYTL1Q9NRR1 136 aa14.54□□□□□ -0.08
SSBP4-210ENST00000601444 PDE6HQ13956 83 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms