RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 PLECQ15149 4684 aaKnown RBP12.42□□□□□ -0.42
HERC3-214ENST00000601319 SSNA1O43805 119 aa12.42□□□□□ -0.42
HERC3-214ENST00000601319 DUSP14O95147 198 aaKnown RBP12.42□□□□□ -0.42
HERC3-214ENST00000601319 IGKV3-20P01619 116 aa12.42□□□□□ -0.42
HERC3-214ENST00000601319 CXCL3P19876 107 aa12.42□□□□□ -0.42
HERC3-214ENST00000601319 NANOS2P60321 138 aaKnown RBP12.42□□□□□ -0.42
HERC3-214ENST00000601319 BAXQ07812 192 aa12.42□□□□□ -0.42
HERC3-214ENST00000601319 LCN15Q6UWW0 184 aa12.42□□□□□ -0.42
HERC3-214ENST00000601319 AMTNQ6UX39 209 aa12.42□□□□□ -0.42
HERC3-214ENST00000601319 BPIFA4PQ86YQ2 179 aa12.42□□□□□ -0.42
HERC3-214ENST00000601319 RNF182Q8N6D2 247 aa12.42□□□□□ -0.42
HERC3-214ENST00000601319 OR1L4Q8NGR5 311 aa12.42□□□□□ -0.42
HERC3-214ENST00000601319 DNAJC4Q9NNZ3 241 aa12.42□□□□□ -0.42
HERC3-214ENST00000601319 OR5AC2Q9NZP5 309 aa12.42□□□□□ -0.42
HERC3-214ENST00000601319 SMIM9A6NGZ8 99 aa12.41□□□□□ -0.42
HERC3-214ENST00000601319 PTTG1O95997 202 aa12.41□□□□□ -0.42
HERC3-214ENST00000601319 PET100P0DJ07 73 aa12.41□□□□□ -0.42
HERC3-214ENST00000601319 FGF7P21781 194 aa12.41□□□□□ -0.42
HERC3-214ENST00000601319 FGL1Q08830 312 aa12.41□□□□□ -0.42
HERC3-214ENST00000601319 LRRC37A5PQ49AS3 106 aa12.41□□□□□ -0.42
HERC3-214ENST00000601319 MIC13Q5XKP0 118 aa12.41□□□□□ -0.42
HERC3-214ENST00000601319 PPP1R1CQ8WVI7 109 aa12.41□□□□□ -0.42
HERC3-214ENST00000601319 SLC50A1Q9BRV3 221 aa12.41□□□□□ -0.42
HERC3-214ENST00000601319 SLC35B3Q9H1N7 401 aa12.41□□□□□ -0.42
HERC3-214ENST00000601319 SLC39A9Q9NUM3 307 aa12.41□□□□□ -0.42
HERC3-214ENST00000601319 H0YIZ8 118 aa12.4□□□□□ -0.42
HERC3-214ENST00000601319 AMBPP02760 352 aa12.4□□□□□ -0.42
HERC3-214ENST00000601319 IGLC2P0DOY2 106 aa12.4□□□□□ -0.42
HERC3-214ENST00000601319 CNN1P51911 297 aaKnown RBP12.4□□□□□ -0.42
HERC3-214ENST00000601319 B2MP61769 119 aa12.4□□□□□ -0.42
HERC3-214ENST00000601319 NHLH2Q02577 135 aa12.4□□□□□ -0.42
HERC3-214ENST00000601319 MORN5Q5VZ52 161 aa12.4□□□□□ -0.42
HERC3-214ENST00000601319 ZNF738Q8NE65 137 aa12.4□□□□□ -0.42
HERC3-214ENST00000601319 OR5C1Q8NGR4 320 aa12.4□□□□□ -0.42
HERC3-214ENST00000601319 LINC00476Q8WZB0 136 aa12.4□□□□□ -0.42
HERC3-214ENST00000601319 ZNF331Q9NQX6 463 aaPredicted RBP12.4□□□□□ -0.42
HERC3-214ENST00000601319 PXMP4Q9Y6I8 212 aa12.4□□□□□ -0.42
HERC3-214ENST00000601319 PSG3Q16557 428 aa12.39□□□□□ -0.43
HERC3-214ENST00000601319 DMRTA1Q5VZB9 504 aa12.39□□□□□ -0.43
HERC3-214ENST00000601319 IGFL4Q6B9Z1 124 aa12.39□□□□□ -0.43
HERC3-214ENST00000601319 NPCDR1Q9BY65 106 aa12.39□□□□□ -0.43
HERC3-214ENST00000601319 C11orf94C9JXX5 98 aa12.38□□□□□ -0.43
HERC3-214ENST00000601319 MPC2O95563 127 aa12.38□□□□□ -0.43
HERC3-214ENST00000601319 FXYD7P58549 80 aa12.38□□□□□ -0.43
HERC3-214ENST00000601319 GUK1Q16774 197 aa12.38□□□□□ -0.43
HERC3-214ENST00000601319 OR11H7Q8NGC8 314 aa12.38□□□□□ -0.43
HERC3-214ENST00000601319 LRRC20Q8TCA0 184 aa12.38□□□□□ -0.43
HERC3-214ENST00000601319 KCNIP2Q9NS61 270 aa12.38□□□□□ -0.43
HERC3-214ENST00000601319 GOLT1BQ9Y3E0 138 aa12.38□□□□□ -0.43
HERC3-214ENST00000601319 TMEM189A5PLL7 270 aa12.37□□□□□ -0.43
HERC3-214ENST00000601319 OR8A1Q8NGG7 326 aa12.37□□□□□ -0.43
HERC3-214ENST00000601319 IGF2BP2-AS1Q96M15 143 aa12.37□□□□□ -0.43
HERC3-214ENST00000601319 RNF126Q9BV68 326 aa12.37□□□□□ -0.43
HERC3-214ENST00000601319 RFNGQ9Y644 331 aa12.37□□□□□ -0.43
HERC3-214ENST00000601319 BOLA2-SMG1P6H3BVE0 249 aa12.36□□□□□ -0.43
HERC3-214ENST00000601319 ZNF253O75346 499 aa12.36□□□□□ -0.43
HERC3-214ENST00000601319 HLA-DMBP28068 263 aa12.36□□□□□ -0.43
HERC3-214ENST00000601319 TCTAP57738 103 aa12.36□□□□□ -0.43
HERC3-214ENST00000601319 C1orf158Q8N1D5 194 aa12.36□□□□□ -0.43
HERC3-214ENST00000601319 THAP6Q8TBB0 222 aa12.36□□□□□ -0.43
HERC3-214ENST00000601319 RPUSD4Q96CM3 377 aaKnown RBP12.36□□□□□ -0.43
HERC3-214ENST00000601319 SAT2Q96F10 170 aaPredicted RBP12.36□□□□□ -0.43
HERC3-214ENST00000601319 TMEM14CQ9P0S9 112 aa12.36□□□□□ -0.43
HERC3-214ENST00000601319 ALG5Q9Y673 324 aa12.36□□□□□ -0.43
HERC3-214ENST00000601319 H3BQ15 152 aa12.35□□□□□ -0.43
HERC3-214ENST00000601319 SLC17A3O00476 420 aa12.35□□□□□ -0.43
HERC3-214ENST00000601319 INSP01308 110 aa12.35□□□□□ -0.43
HERC3-214ENST00000601319 HIST1H1AQ02539 215 aaPredicted RBP12.35□□□□□ -0.43
HERC3-214ENST00000601319 CLINT1Q14677 625 aa12.35□□□□□ -0.43
HERC3-214ENST00000601319 C2CD4CQ8TF44 421 aa12.35□□□□□ -0.43
HERC3-214ENST00000601319 WDR61Q9GZS3 305 aaKnown RBP12.35□□□□□ -0.43
HERC3-214ENST00000601319 CELA1Q9UNI1 258 aa12.35□□□□□ -0.43
HERC3-214ENST00000601319 TRAV5A0A0B4J249 113 aa12.34□□□□□ -0.43
HERC3-214ENST00000601319 TEX48A0A1B0GUV7 120 aa12.34□□□□□ -0.43
HERC3-214ENST00000601319 CRXO43186 299 aaPredicted RBP12.34□□□□□ -0.43
HERC3-214ENST00000601319 SPINK13Q1W4C9 94 aa12.34□□□□□ -0.43
HERC3-214ENST00000601319 Q6ZTC4 211 aa12.34□□□□□ -0.43
HERC3-214ENST00000601319 ATP5SQ99766 215 aa12.34□□□□□ -0.43
HERC3-214ENST00000601319 HSPB11Q9Y547 144 aa12.34□□□□□ -0.43
HERC3-214ENST00000601319 HYDINQ4G0P3 5121 aa12.33□□□□□ -0.44
HERC3-214ENST00000601319 IGHV3OR16-12A0A075B7B8 117 aa12.33□□□□□ -0.44
HERC3-214ENST00000601319 TRAV10A0A0B4J240 114 aa12.33□□□□□ -0.44
HERC3-214ENST00000601319 M0R2Z0 102 aa12.33□□□□□ -0.44
HERC3-214ENST00000601319 HBE1P02100 147 aa12.33□□□□□ -0.44
HERC3-214ENST00000601319 MBD2Q9UBB5 411 aa12.33□□□□□ -0.44
HERC3-214ENST00000601319 RPL12P30050 165 aaKnown RBP12.32□□□□□ -0.44
HERC3-214ENST00000601319 PDE6HQ13956 83 aa12.32□□□□□ -0.44
HERC3-214ENST00000601319 C12orf74Q32Q52 190 aa12.32□□□□□ -0.44
HERC3-214ENST00000601319 MRPL53Q96EL3 112 aaKnown RBP12.32□□□□□ -0.44
HERC3-214ENST00000601319 MRPL32Q9BYC8 188 aaKnown RBP12.32□□□□□ -0.44
HERC3-214ENST00000601319 ZNF586Q9NXT0 402 aa12.32□□□□□ -0.44
HERC3-214ENST00000601319 TRBV19A0A075B6N1 114 aa12.31□□□□□ -0.44
HERC3-214ENST00000601319 LOC102723971A0A1B0GUV8 181 aa12.31□□□□□ -0.44
HERC3-214ENST00000601319 C17orf112F2Z3M2 114 aa12.31□□□□□ -0.44
HERC3-214ENST00000601319 H3BTX0 84 aa12.31□□□□□ -0.44
HERC3-214ENST00000601319 SNRPCP09234 159 aaKnown RBP12.31□□□□□ -0.44
HERC3-214ENST00000601319 SPART-AS1P0CW21 52 aa12.31□□□□□ -0.44
HERC3-214ENST00000601319 HIST1H1EP10412 219 aaKnown RBP12.31□□□□□ -0.44
HERC3-214ENST00000601319 RHOBP62745 196 aa12.31□□□□□ -0.44
HERC3-214ENST00000601319 RRN3P1Q2M238 152 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms