RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 RPL29P47914 159 aaKnown RBP13.33□□□□□ -0.28
SHKBP1-202ENST00000593764 CYCSP99999 105 aaKnown RBP13.33□□□□□ -0.28
SHKBP1-202ENST00000593764 LRRC37A5PQ49AS3 106 aa13.33□□□□□ -0.28
SHKBP1-202ENST00000593764 C10orf113Q5VZT2 155 aa13.33□□□□□ -0.28
SHKBP1-202ENST00000593764 RNF24Q9Y225 148 aa13.33□□□□□ -0.28
SHKBP1-202ENST00000593764 KLK5Q9Y337 293 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-202ENST00000593764 E5RGE8 158 aa13.32□□□□□ -0.28
SHKBP1-202ENST00000593764 CXCL3P19876 107 aa13.32□□□□□ -0.28
SHKBP1-202ENST00000593764 BAXQ07812 192 aa13.32□□□□□ -0.28
SHKBP1-202ENST00000593764 OPCMLQ14982 345 aa13.32□□□□□ -0.28
SHKBP1-202ENST00000593764 Q6ZRG5 221 aa13.32□□□□□ -0.28
SHKBP1-202ENST00000593764 NEU1Q99519 415 aa13.32□□□□□ -0.28
SHKBP1-202ENST00000593764 RNF126Q9BV68 326 aa13.32□□□□□ -0.28
SHKBP1-202ENST00000593764 CNN1P51911 297 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-202ENST00000593764 PPP1R1CQ8WVI7 109 aa13.31□□□□□ -0.28
SHKBP1-202ENST00000593764 SLC39A9Q9NUM3 307 aa13.31□□□□□ -0.28
SHKBP1-202ENST00000593764 KMT2AQ03164 3969 aa13.3□□□□□ -0.28
SHKBP1-202ENST00000593764 TRAV5A0A0B4J249 113 aa13.3□□□□□ -0.28
SHKBP1-202ENST00000593764 SSNA1O43805 119 aa13.3□□□□□ -0.28
SHKBP1-202ENST00000593764 SNRPCP09234 159 aaKnown RBP13.3□□□□□ -0.28
SHKBP1-202ENST00000593764 FGF7P21781 194 aa13.3□□□□□ -0.28
SHKBP1-202ENST00000593764 B2MP61769 119 aa13.3□□□□□ -0.28
SHKBP1-202ENST00000593764 PSG3Q16557 428 aa13.3□□□□□ -0.28
SHKBP1-202ENST00000593764 BPIFA4PQ86YQ2 179 aa13.3□□□□□ -0.28
SHKBP1-202ENST00000593764 C1orf158Q8N1D5 194 aa13.3□□□□□ -0.28
SHKBP1-202ENST00000593764 ZNF738Q8NE65 137 aa13.3□□□□□ -0.28
SHKBP1-202ENST00000593764 OR5C1Q8NGR4 320 aa13.3□□□□□ -0.28
SHKBP1-202ENST00000593764 LINC00476Q8WZB0 136 aa13.3□□□□□ -0.28
SHKBP1-202ENST00000593764 SLC25A31Q9H0C2 315 aa13.3□□□□□ -0.28
SHKBP1-202ENST00000593764 CELA1Q9UNI1 258 aa13.3□□□□□ -0.28
SHKBP1-202ENST00000593764 IGLC2P0DOY2 106 aa13.29□□□□□ -0.28
SHKBP1-202ENST00000593764 CXCL2P19875 107 aa13.29□□□□□ -0.28
SHKBP1-202ENST00000593764 OR11H7Q8NGC8 314 aa13.29□□□□□ -0.28
SHKBP1-202ENST00000593764 OR1L4Q8NGR5 311 aa13.29□□□□□ -0.28
SHKBP1-202ENST00000593764 LRRC20Q8TCA0 184 aa13.29□□□□□ -0.28
SHKBP1-202ENST00000593764 ZNF331Q9NQX6 463 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-202ENST00000593764 PXMP4Q9Y6I8 212 aa13.29□□□□□ -0.28
SHKBP1-202ENST00000593764 IGHV3OR16-12A0A075B7B8 117 aa13.28□□□□□ -0.28
SHKBP1-202ENST00000593764 SMIM9A6NGZ8 99 aa13.28□□□□□ -0.28
SHKBP1-202ENST00000593764 H3BQ15 152 aa13.28□□□□□ -0.28
SHKBP1-202ENST00000593764 MPDU1O75352 247 aa13.28□□□□□ -0.28
SHKBP1-202ENST00000593764 DUSP14O95147 198 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-202ENST00000593764 MPC2O95563 127 aa13.28□□□□□ -0.28
SHKBP1-202ENST00000593764 PRB4P10163 310 aaPredicted RBP13.28□□□□□ -0.28
SHKBP1-202ENST00000593764 LCN15Q6UWW0 184 aa13.28□□□□□ -0.28
SHKBP1-202ENST00000593764 OR8A1Q8NGG7 326 aa13.28□□□□□ -0.28
SHKBP1-202ENST00000593764 THAP6Q8TBB0 222 aa13.28□□□□□ -0.28
SHKBP1-202ENST00000593764 SAT2Q96F10 170 aaPredicted RBP13.28□□□□□ -0.28
SHKBP1-202ENST00000593764 PFDN5Q99471 154 aa13.28□□□□□ -0.28
SHKBP1-202ENST00000593764 NPCDR1Q9BY65 106 aa13.28□□□□□ -0.28
SHKBP1-202ENST00000593764 H3BTX0 84 aa13.27□□□□□ -0.29
SHKBP1-202ENST00000593764 SLC17A3O00476 420 aa13.27□□□□□ -0.29
SHKBP1-202ENST00000593764 CRXO43186 299 aaPredicted RBP13.27□□□□□ -0.29
SHKBP1-202ENST00000593764 Q6ZTC4 211 aa13.27□□□□□ -0.29
SHKBP1-202ENST00000593764 IGF2BP2-AS1Q96M15 143 aa13.27□□□□□ -0.29
SHKBP1-202ENST00000593764 SLC50A1Q9BRV3 221 aa13.27□□□□□ -0.29
SHKBP1-202ENST00000593764 M0R2Z0 102 aa13.26□□□□□ -0.29
SHKBP1-202ENST00000593764 CLINT1Q14677 625 aa13.26□□□□□ -0.29
SHKBP1-202ENST00000593764 SPINK13Q1W4C9 94 aa13.26□□□□□ -0.29
SHKBP1-202ENST00000593764 C12orf74Q32Q52 190 aa13.26□□□□□ -0.29
SHKBP1-202ENST00000593764 GCSAMLQ5JQS6 135 aa13.26□□□□□ -0.29
SHKBP1-202ENST00000593764 RPUSD4Q96CM3 377 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-202ENST00000593764 GOLT1BQ9Y3E0 138 aa13.26□□□□□ -0.29
SHKBP1-202ENST00000593764 VPS13DQ5THJ4 4388 aa13.25□□□□□ -0.29
SHKBP1-202ENST00000593764 C11orf94C9JXX5 98 aa13.25□□□□□ -0.29
SHKBP1-202ENST00000593764 LY6G6CO95867 125 aa13.25□□□□□ -0.29
SHKBP1-202ENST00000593764 HIST1H1AQ02539 215 aaPredicted RBP13.25□□□□□ -0.29
SHKBP1-202ENST00000593764 C2CD4CQ8TF44 421 aa13.25□□□□□ -0.29
SHKBP1-202ENST00000593764 ZNF586Q9NXT0 402 aa13.25□□□□□ -0.29
SHKBP1-202ENST00000593764 RFNGQ9Y644 331 aa13.25□□□□□ -0.29
SHKBP1-202ENST00000593764 ALG5Q9Y673 324 aa13.25□□□□□ -0.29
SHKBP1-202ENST00000593764 PTTG1O95997 202 aa13.24□□□□□ -0.29
SHKBP1-202ENST00000593764 AMBPP02760 352 aa13.24□□□□□ -0.29
SHKBP1-202ENST00000593764 ZNF767PQ75MW2 155 aa13.24□□□□□ -0.29
SHKBP1-202ENST00000593764 WDR61Q9GZS3 305 aaKnown RBP13.24□□□□□ -0.29
SHKBP1-202ENST00000593764 TMEM189A5PLL7 270 aa13.23□□□□□ -0.29
SHKBP1-202ENST00000593764 PRAC2D3DTV9 90 aa13.23□□□□□ -0.29
SHKBP1-202ENST00000593764 EMP1P54849 157 aa13.23□□□□□ -0.29
SHKBP1-202ENST00000593764 GUK1Q16774 197 aa13.23□□□□□ -0.29
SHKBP1-202ENST00000593764 BAP18Q8IXM2 172 aa13.23□□□□□ -0.29
SHKBP1-202ENST00000593764 TMEM14CQ9P0S9 112 aa13.23□□□□□ -0.29
SHKBP1-202ENST00000593764 HSPB11Q9Y547 144 aa13.23□□□□□ -0.29
SHKBP1-202ENST00000593764 TRAV12-2A0A075B6T6 113 aa13.22□□□□□ -0.29
SHKBP1-202ENST00000593764 BOLA2-SMG1P6H3BVE0 249 aa13.22□□□□□ -0.29
SHKBP1-202ENST00000593764 HBE1P02100 147 aa13.22□□□□□ -0.29
SHKBP1-202ENST00000593764 PRM2P04554 102 aa13.22□□□□□ -0.29
SHKBP1-202ENST00000593764 PET100P0DJ07 73 aa13.22□□□□□ -0.29
SHKBP1-202ENST00000593764 RHOBP62745 196 aa13.22□□□□□ -0.29
SHKBP1-202ENST00000593764 ATP5SQ99766 215 aa13.22□□□□□ -0.29
SHKBP1-202ENST00000593764 MBD2Q9UBB5 411 aa13.22□□□□□ -0.29
SHKBP1-202ENST00000593764 TRBV19A0A075B6N1 114 aa13.21□□□□□ -0.29
SHKBP1-202ENST00000593764 TRAV10A0A0B4J240 114 aa13.21□□□□□ -0.29
SHKBP1-202ENST00000593764 IGLL5B9A064 214 aa13.21□□□□□ -0.29
SHKBP1-202ENST00000593764 ZNF253O75346 499 aa13.21□□□□□ -0.29
SHKBP1-202ENST00000593764 SPART-AS1P0CW21 52 aa13.21□□□□□ -0.29
SHKBP1-202ENST00000593764 RPL12P30050 165 aaKnown RBP13.21□□□□□ -0.29
SHKBP1-202ENST00000593764 FAM167A-AS1Q96KT0 104 aa13.21□□□□□ -0.29
SHKBP1-202ENST00000593764 DKK2Q9UBU2 259 aa13.21□□□□□ -0.29
SHKBP1-202ENST00000593764 APLNQ9ULZ1 77 aa13.21□□□□□ -0.29
SHKBP1-202ENST00000593764 LOC102723971A0A1B0GUV8 181 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms