RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 SULT1A2P50226 295 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 HNRNPA3P51991 378 aaKnown RBP3.43□□□□□ -1.86
ERCC1-216ENST00000592444 PLP1P60201 277 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 GAMTQ14353 236 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 FXYD3Q14802 87 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 TNXAQ16473 311 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 SPANXN5Q5MJ07 72 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 FAM74A1Q5RGS3 127 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 SPSB3Q6PJ21 355 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 TMEM144Q7Z5S9 345 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 BAP18Q8IXM2 172 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 TMEM61Q8N0U2 210 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 OR4A16Q8NH70 328 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 ZNF502Q8TBZ5 544 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 CACNG8Q8WXS5 425 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 ATP6V0BQ99437 205 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 RSG1Q9BU20 258 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 TMEM147Q9BVK8 224 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 NPCDR1Q9BY65 106 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 COMMD5Q9GZQ3 224 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 CSTL1Q9H114 145 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 VSIRQ9H7M9 311 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 MED9Q9NWA0 146 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 SLC45A2Q9UMX9 530 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 STRAPQ9Y3F4 350 aaKnown RBP3.43□□□□□ -1.86
ERCC1-216ENST00000592444 TIMM9Q9Y5J7 89 aa3.43□□□□□ -1.86
ERCC1-216ENST00000592444 TRAV1-1A0A0B4J248 108 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 UBE2L5PA0A1B0GUS4 154 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 LINC00862A6NCI5 91 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 CEBPZOSA8MTT3 80 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 H3BUA1 57 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 SNAPC5O75971 98 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 DNAH10OSP0CZ25 163 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 GPX4P36969 197 aaPredicted RBP3.42□□□□□ -1.86
ERCC1-216ENST00000592444 HOXA1P49639 335 aaPredicted RBP3.42□□□□□ -1.86
ERCC1-216ENST00000592444 FHITP49789 147 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 CAV2P51636 162 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 ERVFC1-1P60608 527 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 DEFA5Q01523 94 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 CLINT1Q14677 625 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 RPEL1Q2QD12 228 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 GCSAMLQ5JQS6 135 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 CLLU1Q5K131 121 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 MORN5Q5VZ52 161 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 ZNF343Q6P1L6 599 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 BTNL8Q6UX41 500 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 ALKAL2Q6UX46 152 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 PATE2Q6UY27 113 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 STX12Q86Y82 276 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 LFNGQ8NES3 379 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 OR4X1Q8NH49 305 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 RNASE11Q8TAA1 199 aaKnown RBP3.42□□□□□ -1.86
ERCC1-216ENST00000592444 SUN5Q8TC36 379 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 SCARB1Q8WTV0 552 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 TMED6Q8WW62 240 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 PINX1Q96BK5 328 aaKnown RBP3.42□□□□□ -1.86
ERCC1-216ENST00000592444 RNF125Q96EQ8 232 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 FAM210BQ96KR6 192 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 FAM167A-AS1Q96KT0 104 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 TMEM68Q96MH6 324 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 SMIM3Q9BZL3 60 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 SLC25A31Q9H0C2 315 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 HEYLQ9NQ87 328 aaPredicted RBP3.42□□□□□ -1.86
ERCC1-216ENST00000592444 UQCC1Q9NVA1 299 aa3.42□□□□□ -1.86
ERCC1-216ENST00000592444 TECRQ9NZ01 308 aaKnown RBP3.42□□□□□ -1.86
ERCC1-216ENST00000592444 AGPAT2O15120 278 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 MPDU1O75352 247 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 DFFBO76075 338 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 OR2C1O95371 312 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 MT-CO2P00403 227 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 TRBV12-3P01733 135 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 PRH1P02810 166 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 TRGV3P03979 118 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 CTSGP08311 255 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 OR5G3P0C626 314 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 APELAP0DMC3 54 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 TPT1P13693 172 aaKnown RBP3.41□□□□□ -1.86
ERCC1-216ENST00000592444 FOLR2P14207 255 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 PVALBP20472 110 aaPredicted RBP3.41□□□□□ -1.86
ERCC1-216ENST00000592444 OPRK1P41145 380 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 RPL29P47914 159 aaKnown RBP3.41□□□□□ -1.86
ERCC1-216ENST00000592444 RND2P52198 227 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 HBG1P69891 147 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 HBG2P69892 147 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 ZNF266Q14584 549 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 ATP6V1FQ16864 119 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 OR8G2PQ6IF36 304 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 EIF4E3Q8N5X7 224 aaKnown RBP3.41□□□□□ -1.86
ERCC1-216ENST00000592444 INO80EQ8NBZ0 244 aaPredicted RBP3.41□□□□□ -1.86
ERCC1-216ENST00000592444 OR1S2Q8NGQ3 325 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 VN1R17PQ8TDU5 208 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 TMEM37Q8WXS4 190 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 CXorf58Q96LI9 332 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 C16orf92Q96LL3 132 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 CLCC1Q96S66 551 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 TRGV9Q99603 122 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 ZNF471Q9BX82 626 aaPredicted RBP3.41□□□□□ -1.86
ERCC1-216ENST00000592444 RPRMQ9NS64 109 aa3.41□□□□□ -1.86
ERCC1-216ENST00000592444 KANTRA0A1W2PQU2 76 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 C2orf70A6NJV1 201 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms