RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 H3BTX0 84 aa7.35□□□□□ -1.23
BRCA1-227ENST00000591849 DEFB4AO15263 64 aa7.35□□□□□ -1.23
BRCA1-227ENST00000591849 CXCL2P19875 107 aa7.35□□□□□ -1.23
BRCA1-227ENST00000591849 CXCL3P19876 107 aa7.35□□□□□ -1.23
BRCA1-227ENST00000591849 PSG3Q16557 428 aa7.35□□□□□ -1.23
BRCA1-227ENST00000591849 GDF5OSQ5U4N7 250 aa7.35□□□□□ -1.23
BRCA1-227ENST00000591849 SLC50A1Q9BRV3 221 aa7.35□□□□□ -1.23
BRCA1-227ENST00000591849 WDR61Q9GZS3 305 aaKnown RBP7.35□□□□□ -1.23
BRCA1-227ENST00000591849 MFFQ9GZY8 342 aa7.35□□□□□ -1.23
BRCA1-227ENST00000591849 TIMM9Q9Y5J7 89 aa7.35□□□□□ -1.23
BRCA1-227ENST00000591849 HUWE1Q7Z6Z7 4374 aaKnown RBP7.35□□□□□ -1.23
BRCA1-227ENST00000591849 TRAV8-2A0A0B4J237 113 aa7.34□□□□□ -1.23
BRCA1-227ENST00000591849 GIG44P09565 113 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-227ENST00000591849 ZNF705DP0CH99 300 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-227ENST00000591849 ZNF705BP0CI00 300 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-227ENST00000591849 MIFP14174 115 aa7.34□□□□□ -1.23
BRCA1-227ENST00000591849 HIST1H1AQ02539 215 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-227ENST00000591849 GUK1Q16774 197 aa7.34□□□□□ -1.23
BRCA1-227ENST00000591849 MORN5Q5VZ52 161 aa7.34□□□□□ -1.23
BRCA1-227ENST00000591849 C11orf45Q8TAV5 145 aa7.34□□□□□ -1.23
BRCA1-227ENST00000591849 RPUSD4Q96CM3 377 aaKnown RBP7.34□□□□□ -1.23
BRCA1-227ENST00000591849 C17orf77Q96MU5 243 aa7.34□□□□□ -1.23
BRCA1-227ENST00000591849 TMEM208Q9BTX3 173 aa7.34□□□□□ -1.23
BRCA1-227ENST00000591849 GOLT1BQ9Y3E0 138 aa7.34□□□□□ -1.23
BRCA1-227ENST00000591849 IGHV4-28A0A0C4DH34 117 aa7.33□□□□□ -1.24
BRCA1-227ENST00000591849 AMBPP02760 352 aa7.33□□□□□ -1.24
BRCA1-227ENST00000591849 GIPP09681 153 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-227ENST00000591849 HLA-DMBP28068 263 aa7.33□□□□□ -1.24
BRCA1-227ENST00000591849 CNN1P51911 297 aaKnown RBP7.33□□□□□ -1.24
BRCA1-227ENST00000591849 FFAR4Q5NUL3 377 aa7.33□□□□□ -1.24
BRCA1-227ENST00000591849 INO80EQ8NBZ0 244 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-227ENST00000591849 OR11H7Q8NGC8 314 aa7.33□□□□□ -1.24
BRCA1-227ENST00000591849 OR8A1Q8NGG7 326 aa7.33□□□□□ -1.24
BRCA1-227ENST00000591849 OR10J6PQ8NGY7 276 aa7.33□□□□□ -1.24
BRCA1-227ENST00000591849 ASB13Q8WXK3 278 aa7.33□□□□□ -1.24
BRCA1-227ENST00000591849 CLUHP3Q96NS8 147 aa7.33□□□□□ -1.24
BRCA1-227ENST00000591849 SLC35B3Q9H1N7 401 aa7.33□□□□□ -1.24
BRCA1-227ENST00000591849 HRH4Q9H3N8 390 aa7.33□□□□□ -1.24
BRCA1-227ENST00000591849 ZNF331Q9NQX6 463 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-227ENST00000591849 KLK5Q9Y337 293 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-227ENST00000591849 TENM2Q9NT68 2774 aa7.32□□□□□ -1.24
BRCA1-227ENST00000591849 FXYD6-FXYD2A0A087WZ82 144 aa7.32□□□□□ -1.24
BRCA1-227ENST00000591849 H3BQ15 152 aa7.32□□□□□ -1.24
BRCA1-227ENST00000591849 MRPS12O15235 138 aaKnown RBP7.32□□□□□ -1.24
BRCA1-227ENST00000591849 HIST1H1EP10412 219 aaKnown RBP7.32□□□□□ -1.24
BRCA1-227ENST00000591849 GCSAMLQ5JQS6 135 aa7.32□□□□□ -1.24
BRCA1-227ENST00000591849 BLNKQ8WV28 456 aa7.32□□□□□ -1.24
BRCA1-227ENST00000591849 C11orf68Q9H3H3 251 aaKnown RBP7.32□□□□□ -1.24
BRCA1-227ENST00000591849 RYR2Q92736 4967 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 A0A1W2PPV4 95 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 NUPR2A6NF83 97 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 SMIM9A6NGZ8 99 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 ZNF705FA8MVS1 300 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-227ENST00000591849 ZNF705EA8MWA4 302 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-227ENST00000591849 OR7C2O60412 319 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 JTBO76095 146 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 HBE1P02100 147 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 IGLC2P0DOY2 106 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 PRB4P10163 310 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-227ENST00000591849 EMP1P54849 157 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 TAS2R45P59539 299 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 NANOS2P60321 138 aaKnown RBP7.31□□□□□ -1.24
BRCA1-227ENST00000591849 ZNF266Q14584 549 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 OXA1LQ15070 435 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 SPINK13Q1W4C9 94 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 ACOT6Q3I5F7 207 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-227ENST00000591849 MIR17HGQ75NE6 70 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 CSNK1G2-AS1Q8NCQ2 148 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 PAXXQ9BUH6 204 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 MRPL32Q9BYC8 188 aaKnown RBP7.31□□□□□ -1.24
BRCA1-227ENST00000591849 OR51M1Q9H341 326 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 AAMDCQ9H7C9 122 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 WFDC1Q9HC57 220 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 ZNF586Q9NXT0 402 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 TMEM14CQ9P0S9 112 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 FUT9Q9Y231 359 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 AGRNO00468 2067 aa7.31□□□□□ -1.24
BRCA1-227ENST00000591849 TRBV19A0A075B6N1 114 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 BOLA2-SMG1P6H3BVE0 249 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 M0R2Z0 102 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 SLC17A3O00476 420 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 INSP01308 110 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 NBEAP1P0C6P0 100 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 RBMY1A1P0DJD3 496 aaKnown RBP7.3□□□□□ -1.24
BRCA1-227ENST00000591849 RBMY1CP0DJD4 496 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 PYYP10082 97 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 TSPOP30536 169 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 RBMY1FQ15415 496 aaKnown RBP7.3□□□□□ -1.24
BRCA1-227ENST00000591849 CEMP1Q6PRD7 247 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-227ENST00000591849 Q8NAQ8 132 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 OR2T35Q8NGX2 323 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 PHLDA1Q8WV24 401 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-227ENST00000591849 IGF2BP2-AS1Q96M15 143 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 SLC25A2Q9BXI2 301 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 PARD6GQ9BYG4 376 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-227ENST00000591849 PRELID1Q9Y255 219 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 RFNGQ9Y644 331 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 X6R8D5 127 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 DNAH7Q8WXX0 4024 aa7.3□□□□□ -1.24
BRCA1-227ENST00000591849 BORCS7-ASMTA0A0B4J1R7 106 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms