RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 ATP5SQ99766 215 aa9.7□□□□□ -0.86
SS18-222ENST00000582792 XCL2Q9UBD3 114 aa9.7□□□□□ -0.86
SS18-222ENST00000582792 IGLV2-18A0A075B6J9 118 aa9.69□□□□□ -0.86
SS18-222ENST00000582792 RPL29P47914 159 aaKnown RBP9.69□□□□□ -0.86
SS18-222ENST00000582792 CAMLGP49069 296 aa9.69□□□□□ -0.86
SS18-222ENST00000582792 AP2S1P53680 142 aaPredicted RBP9.69□□□□□ -0.86
SS18-222ENST00000582792 LYZP61626 148 aa9.69□□□□□ -0.86
SS18-222ENST00000582792 OR2F1Q13607 317 aa9.69□□□□□ -0.86
SS18-222ENST00000582792 C1orf194Q5T5A4 169 aa9.69□□□□□ -0.86
SS18-222ENST00000582792 TMEM182Q6ZP80 229 aaPredicted RBP9.69□□□□□ -0.86
SS18-222ENST00000582792 ZNF575Q86XF7 245 aa9.69□□□□□ -0.86
SS18-222ENST00000582792 INO80EQ8NBZ0 244 aaPredicted RBP9.69□□□□□ -0.86
SS18-222ENST00000582792 FAM210BQ96KR6 192 aa9.69□□□□□ -0.86
SS18-222ENST00000582792 NEU1Q99519 415 aa9.69□□□□□ -0.86
SS18-222ENST00000582792 MGST2Q99735 147 aa9.69□□□□□ -0.86
SS18-222ENST00000582792 SEPSECSQ9HD40 501 aaKnown RBP9.69□□□□□ -0.86
SS18-222ENST00000582792 TNFSF18Q9UNG2 199 aa9.69□□□□□ -0.86
SS18-222ENST00000582792 RNF24Q9Y225 148 aa9.69□□□□□ -0.86
SS18-222ENST00000582792 UBE2L5PA0A1B0GUS4 154 aa9.68□□□□□ -0.86
SS18-222ENST00000582792 H3BMM0 161 aa9.68□□□□□ -0.86
SS18-222ENST00000582792 BUB3O43684 328 aa9.68□□□□□ -0.86
SS18-222ENST00000582792 HYPMO75409 117 aa9.68□□□□□ -0.86
SS18-222ENST00000582792 SPART-AS1P0CW21 52 aa9.68□□□□□ -0.86
SS18-222ENST00000582792 SNRPD3P62318 126 aaKnown RBP9.68□□□□□ -0.86
SS18-222ENST00000582792 OPCMLQ14982 345 aa9.68□□□□□ -0.86
SS18-222ENST00000582792 ZNF705AQ6ZN79 300 aaPredicted RBP9.68□□□□□ -0.86
SS18-222ENST00000582792 UBE2DNLQ8IWF7 75 aa9.68□□□□□ -0.86
SS18-222ENST00000582792 PBDC1Q9BVG4 233 aa9.68□□□□□ -0.86
SS18-222ENST00000582792 WDR61Q9GZS3 305 aaKnown RBP9.68□□□□□ -0.86
SS18-222ENST00000582792 KCNIP2Q9NS61 270 aa9.68□□□□□ -0.86
SS18-222ENST00000582792 TMEM189A5PLL7 270 aa9.67□□□□□ -0.86
SS18-222ENST00000582792 HMSDA8MTL9 139 aa9.67□□□□□ -0.86
SS18-222ENST00000582792 ZNF705FA8MVS1 300 aaPredicted RBP9.67□□□□□ -0.86
SS18-222ENST00000582792 IFNA5P01569 189 aa9.67□□□□□ -0.86
SS18-222ENST00000582792 LINC00869P0C866 280 aa9.67□□□□□ -0.86
SS18-222ENST00000582792 ZNF705DP0CH99 300 aaPredicted RBP9.67□□□□□ -0.86
SS18-222ENST00000582792 ZNF705BP0CI00 300 aaPredicted RBP9.67□□□□□ -0.86
SS18-222ENST00000582792 FGF7P21781 194 aa9.67□□□□□ -0.86
SS18-222ENST00000582792 GATA2P23769 480 aaPredicted RBP9.67□□□□□ -0.86
SS18-222ENST00000582792 CLINT1Q14677 625 aa9.67□□□□□ -0.86
SS18-222ENST00000582792 SOHLH1Q5JUK2 328 aa9.67□□□□□ -0.86
SS18-222ENST00000582792 TCTE3Q8IZS6 198 aa9.67□□□□□ -0.86
SS18-222ENST00000582792 NRN1Q9NPD7 142 aa9.67□□□□□ -0.86
SS18-222ENST00000582792 FXYD6-FXYD2A0A087WZ82 144 aa9.66□□□□□ -0.86
SS18-222ENST00000582792 RNF222A6NCQ9 220 aa9.66□□□□□ -0.86
SS18-222ENST00000582792 SMIM9A6NGZ8 99 aa9.66□□□□□ -0.86
SS18-222ENST00000582792 HLA-DRB4P13762 266 aa9.66□□□□□ -0.86
SS18-222ENST00000582792 ORM2P19652 201 aa9.66□□□□□ -0.86
SS18-222ENST00000582792 ZNF266Q14584 549 aa9.66□□□□□ -0.86
SS18-222ENST00000582792 Q6ZRG5 221 aa9.66□□□□□ -0.86
SS18-222ENST00000582792 OR1L4Q8NGR5 311 aa9.66□□□□□ -0.86
SS18-222ENST00000582792 OR1B1Q8NGR6 318 aa9.66□□□□□ -0.86
SS18-222ENST00000582792 ST6GAL2Q96JF0 529 aa9.66□□□□□ -0.86
SS18-222ENST00000582792 GPR82Q96P67 336 aa9.66□□□□□ -0.86
SS18-222ENST00000582792 NPCDR1Q9BY65 106 aa9.66□□□□□ -0.86
SS18-222ENST00000582792 WFDC1Q9HC57 220 aa9.66□□□□□ -0.86
SS18-222ENST00000582792 HIGD1AQ9Y241 93 aa9.66□□□□□ -0.86
SS18-222ENST00000582792 HLA-DRB4X5D2U9 266 aa9.66□□□□□ -0.86
SS18-222ENST00000582792 TEX48A0A1B0GUV7 120 aa9.65□□□□□ -0.86
SS18-222ENST00000582792 ZNF98A6NK75 572 aa9.65□□□□□ -0.86
SS18-222ENST00000582792 C17orf112F2Z3M2 114 aa9.65□□□□□ -0.86
SS18-222ENST00000582792 H3BRN7 92 aa9.65□□□□□ -0.86
SS18-222ENST00000582792 TAAR5O14804 337 aa9.65□□□□□ -0.86
SS18-222ENST00000582792 EMP1P54849 157 aa9.65□□□□□ -0.86
SS18-222ENST00000582792 B2MP61769 119 aa9.65□□□□□ -0.86
SS18-222ENST00000582792 RNF212Q495C1 297 aa9.65□□□□□ -0.86
SS18-222ENST00000582792 ZNF709Q8N972 641 aa9.65□□□□□ -0.86
SS18-222ENST00000582792 SCGB1C1Q8TD33 95 aa9.65□□□□□ -0.86
SS18-222ENST00000582792 PPP1R14BQ96C90 147 aa9.65□□□□□ -0.86
SS18-222ENST00000582792 PFDN5Q99471 154 aa9.65□□□□□ -0.86
SS18-222ENST00000582792 SHANK2-AS3Q9BTD1 123 aa9.65□□□□□ -0.86
SS18-222ENST00000582792 ARL6Q9H0F7 186 aa9.65□□□□□ -0.86
SS18-222ENST00000582792 SLC39A9Q9NUM3 307 aa9.65□□□□□ -0.86
SS18-222ENST00000582792 DKK2Q9UBU2 259 aa9.65□□□□□ -0.86
SS18-222ENST00000582792 ZNF345Q14585 488 aa9.64□□□□□ -0.87
SS18-222ENST00000582792 C1orf134Q5TEV5 83 aa9.64□□□□□ -0.87
SS18-222ENST00000582792 MIC13Q5XKP0 118 aa9.64□□□□□ -0.87
SS18-222ENST00000582792 PATE2Q6UY27 113 aa9.64□□□□□ -0.87
SS18-222ENST00000582792 SIGLEC15Q6ZMC9 328 aa9.64□□□□□ -0.87
SS18-222ENST00000582792 NIPSNAP3BQ9BS92 247 aa9.64□□□□□ -0.87
SS18-222ENST00000582792 SLC25A39Q9BZJ4 359 aaPredicted RBP9.64□□□□□ -0.87
SS18-222ENST00000582792 SMIM3Q9BZL3 60 aa9.64□□□□□ -0.87
SS18-222ENST00000582792 ARV1Q9H2C2 271 aa9.64□□□□□ -0.87
SS18-222ENST00000582792 DNAJC4Q9NNZ3 241 aa9.64□□□□□ -0.87
SS18-222ENST00000582792 TIMM9Q9Y5J7 89 aa9.64□□□□□ -0.87
SS18-222ENST00000582792 RFNGQ9Y644 331 aa9.64□□□□□ -0.87
SS18-222ENST00000582792 PXMP4Q9Y6I8 212 aa9.64□□□□□ -0.87
SS18-222ENST00000582792 IGHV3OR16-12A0A075B7B8 117 aa9.63□□□□□ -0.87
SS18-222ENST00000582792 COX7A2P2O60397 106 aa9.63□□□□□ -0.87
SS18-222ENST00000582792 OR5G3P0C626 314 aa9.63□□□□□ -0.87
SS18-222ENST00000582792 GDF5OSQ5U4N7 250 aa9.63□□□□□ -0.87
SS18-222ENST00000582792 FAM222AQ5U5X8 452 aa9.63□□□□□ -0.87
SS18-222ENST00000582792 SAMD13Q5VXD3 122 aa9.63□□□□□ -0.87
SS18-222ENST00000582792 PLA2G2EQ9NZK7 142 aa9.63□□□□□ -0.87
SS18-222ENST00000582792 NACAE9PAV3 2078 aa9.63□□□□□ -0.87
SS18-222ENST00000582792 A0A0D9SG52 128 aa9.62□□□□□ -0.87
SS18-222ENST00000582792 SMLR1H3BR10 107 aa9.62□□□□□ -0.87
SS18-222ENST00000582792 ARPC5O15511 151 aa9.62□□□□□ -0.87
SS18-222ENST00000582792 IGKV3-20P01619 116 aa9.62□□□□□ -0.87
SS18-222ENST00000582792 GALR1P47211 349 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms