RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 COX7A2P2O60397 106 aa16.47■□□□□ 0.23
VAPA-205ENST00000578314 PRAF2O60831 178 aa16.47■□□□□ 0.23
VAPA-205ENST00000578314 CXCL2P19875 107 aa16.47■□□□□ 0.23
VAPA-205ENST00000578314 PRR20EP86478 221 aa16.47■□□□□ 0.23
VAPA-205ENST00000578314 PRR20CP86479 221 aa16.47■□□□□ 0.23
VAPA-205ENST00000578314 PRR20DP86480 221 aa16.47■□□□□ 0.23
VAPA-205ENST00000578314 PRR20BP86481 221 aa16.47■□□□□ 0.23
VAPA-205ENST00000578314 PRR20AP86496 221 aa16.47■□□□□ 0.23
VAPA-205ENST00000578314 PSG3Q16557 428 aa16.47■□□□□ 0.23
VAPA-205ENST00000578314 STX12Q86Y82 276 aa16.47■□□□□ 0.23
VAPA-205ENST00000578314 ZNF738Q8NE65 137 aa16.47■□□□□ 0.23
VAPA-205ENST00000578314 OR11H7Q8NGC8 314 aa16.47■□□□□ 0.23
VAPA-205ENST00000578314 CHAC2Q8WUX2 184 aa16.47■□□□□ 0.23
VAPA-205ENST00000578314 IGF2BP2-AS1Q96M15 143 aa16.47■□□□□ 0.23
VAPA-205ENST00000578314 AMBPP02760 352 aa16.46■□□□□ 0.23
VAPA-205ENST00000578314 HBG1P69891 147 aa16.46■□□□□ 0.23
VAPA-205ENST00000578314 HBG2P69892 147 aa16.46■□□□□ 0.23
VAPA-205ENST00000578314 ATP6V1FQ16864 119 aa16.46■□□□□ 0.23
VAPA-205ENST00000578314 C10orf113Q5VZT2 155 aa16.46■□□□□ 0.23
VAPA-205ENST00000578314 Q6ZRG5 221 aa16.46■□□□□ 0.23
VAPA-205ENST00000578314 BPIFA4PQ86YQ2 179 aa16.46■□□□□ 0.23
VAPA-205ENST00000578314 LRRC20Q8TCA0 184 aa16.46■□□□□ 0.23
VAPA-205ENST00000578314 INMT-MINDY4F8WBC2 141 aa16.45■□□□□ 0.22
VAPA-205ENST00000578314 SPART-AS1P0CW21 52 aa16.45■□□□□ 0.22
VAPA-205ENST00000578314 RPL29P47914 159 aaKnown RBP16.45■□□□□ 0.22
VAPA-205ENST00000578314 MORN5Q5VZ52 161 aa16.45■□□□□ 0.22
VAPA-205ENST00000578314 MIC13Q5XKP0 118 aa16.45■□□□□ 0.22
VAPA-205ENST00000578314 MARVELD1Q9BSK0 173 aa16.45■□□□□ 0.22
VAPA-205ENST00000578314 FRAS1Q86XX4 4008 aa16.44■□□□□ 0.22
VAPA-205ENST00000578314 SIX6O95475 246 aa16.44■□□□□ 0.22
VAPA-205ENST00000578314 OPCMLQ14982 345 aa16.44■□□□□ 0.22
VAPA-205ENST00000578314 LCN15Q6UWW0 184 aa16.44■□□□□ 0.22
VAPA-205ENST00000578314 ZNF767PQ75MW2 155 aa16.44■□□□□ 0.22
VAPA-205ENST00000578314 OR8A1Q8NGG7 326 aa16.44■□□□□ 0.22
VAPA-205ENST00000578314 NMES1Q9C002 83 aa16.44■□□□□ 0.22
VAPA-205ENST00000578314 ZNF331Q9NQX6 463 aaPredicted RBP16.44■□□□□ 0.22
VAPA-205ENST00000578314 BATF3Q9NR55 127 aa16.44■□□□□ 0.22
VAPA-205ENST00000578314 VPS13DQ5THJ4 4388 aa16.44■□□□□ 0.22
VAPA-205ENST00000578314 CRXO43186 299 aaPredicted RBP16.43■□□□□ 0.22
VAPA-205ENST00000578314 HBE1P02100 147 aa16.43■□□□□ 0.22
VAPA-205ENST00000578314 EMP1P54849 157 aa16.43■□□□□ 0.22
VAPA-205ENST00000578314 OR1L4Q8NGR5 311 aa16.43■□□□□ 0.22
VAPA-205ENST00000578314 SLC50A1Q9BRV3 221 aa16.43■□□□□ 0.22
VAPA-205ENST00000578314 RNF126Q9BV68 326 aa16.43■□□□□ 0.22
VAPA-205ENST00000578314 DEFB131BA0A096LNP1 70 aa16.42■□□□□ 0.22
VAPA-205ENST00000578314 UBE2L5PA0A1B0GUS4 154 aa16.42■□□□□ 0.22
VAPA-205ENST00000578314 M0R2Z0 102 aa16.42■□□□□ 0.22
VAPA-205ENST00000578314 RLN2P04090 185 aa16.42■□□□□ 0.22
VAPA-205ENST00000578314 IGLC2P0DOY2 106 aa16.42■□□□□ 0.22
VAPA-205ENST00000578314 CYCSP99999 105 aaKnown RBP16.42■□□□□ 0.22
VAPA-205ENST00000578314 BAXQ07812 192 aa16.42■□□□□ 0.22
VAPA-205ENST00000578314 SPINK13Q1W4C9 94 aa16.42■□□□□ 0.22
VAPA-205ENST00000578314 PFDN5Q99471 154 aa16.42■□□□□ 0.22
VAPA-205ENST00000578314 SLC39A9Q9NUM3 307 aa16.42■□□□□ 0.22
VAPA-205ENST00000578314 DKK2Q9UBU2 259 aa16.42■□□□□ 0.22
VAPA-205ENST00000578314 IGHV4-4A0A075B6R2 117 aa16.41■□□□□ 0.22
VAPA-205ENST00000578314 TEX48A0A1B0GUV7 120 aa16.41■□□□□ 0.22
VAPA-205ENST00000578314 DEFA1P59665 94 aa16.41■□□□□ 0.22
VAPA-205ENST00000578314 DEFA3P59666 94 aa16.41■□□□□ 0.22
VAPA-205ENST00000578314 B2MP61769 119 aa16.41■□□□□ 0.22
VAPA-205ENST00000578314 HIST1H1AQ02539 215 aaPredicted RBP16.41■□□□□ 0.22
VAPA-205ENST00000578314 RRN3P1Q2M238 152 aa16.41■□□□□ 0.22
VAPA-205ENST00000578314 RPP25LQ8N5L8 163 aaKnown RBP16.41■□□□□ 0.22
VAPA-205ENST00000578314 RPUSD4Q96CM3 377 aaKnown RBP16.41■□□□□ 0.22
VAPA-205ENST00000578314 DNAH10Q8IVF4 4471 aa16.41■□□□□ 0.22
VAPA-205ENST00000578314 TRAV5A0A0B4J249 113 aa16.4■□□□□ 0.22
VAPA-205ENST00000578314 LOC102723971A0A1B0GUV8 181 aa16.4■□□□□ 0.22
VAPA-205ENST00000578314 E5RGE8 158 aa16.4■□□□□ 0.22
VAPA-205ENST00000578314 MPDU1O75352 247 aa16.4■□□□□ 0.22
VAPA-205ENST00000578314 INSP01308 110 aa16.4■□□□□ 0.22
VAPA-205ENST00000578314 SNRPCP09234 159 aaKnown RBP16.4■□□□□ 0.22
VAPA-205ENST00000578314 NHLH2Q02577 135 aa16.4■□□□□ 0.22
VAPA-205ENST00000578314 SAT2Q96F10 170 aaPredicted RBP16.4■□□□□ 0.22
VAPA-205ENST00000578314 TMEM208Q9BTX3 173 aa16.4■□□□□ 0.22
VAPA-205ENST00000578314 SLC25A31Q9H0C2 315 aa16.4■□□□□ 0.22
VAPA-205ENST00000578314 H0YIZ8 118 aa16.39■□□□□ 0.21
VAPA-205ENST00000578314 H3BQ15 152 aa16.39■□□□□ 0.21
VAPA-205ENST00000578314 BOLA2-SMG1P6H3BVE0 249 aa16.39■□□□□ 0.21
VAPA-205ENST00000578314 FGF7P21781 194 aa16.39■□□□□ 0.21
VAPA-205ENST00000578314 FAM222AQ5U5X8 452 aa16.39■□□□□ 0.21
VAPA-205ENST00000578314 OR5AC2Q9NZP5 309 aa16.39■□□□□ 0.21
VAPA-205ENST00000578314 PXMP4Q9Y6I8 212 aa16.39■□□□□ 0.21
VAPA-205ENST00000578314 SLC17A3O00476 420 aa16.38■□□□□ 0.21
VAPA-205ENST00000578314 H2BFSP57053 126 aa16.38■□□□□ 0.21
VAPA-205ENST00000578314 RHOBP62745 196 aa16.38■□□□□ 0.21
VAPA-205ENST00000578314 OXA1LQ15070 435 aa16.38■□□□□ 0.21
VAPA-205ENST00000578314 GUK1Q16774 197 aa16.38■□□□□ 0.21
VAPA-205ENST00000578314 YTHDF2Q9Y5A9 579 aaKnown RBP16.38■□□□□ 0.21
VAPA-205ENST00000578314 H3BTX0 84 aa16.37■□□□□ 0.21
VAPA-205ENST00000578314 BAP18Q8IXM2 172 aa16.37■□□□□ 0.21
VAPA-205ENST00000578314 OR5C1Q8NGR4 320 aa16.37■□□□□ 0.21
VAPA-205ENST00000578314 NIPSNAP3BQ9BS92 247 aa16.37■□□□□ 0.21
VAPA-205ENST00000578314 NPCDR1Q9BY65 106 aa16.37■□□□□ 0.21
VAPA-205ENST00000578314 PPP1R14DQ9NXH3 145 aa16.37■□□□□ 0.21
VAPA-205ENST00000578314 TRAV12-2A0A075B6T6 113 aa16.36■□□□□ 0.21
VAPA-205ENST00000578314 LRRC37A5PQ49AS3 106 aa16.36■□□□□ 0.21
VAPA-205ENST00000578314 ZNF705GA8MUZ8 300 aaPredicted RBP16.35■□□□□ 0.21
VAPA-205ENST00000578314 PRB4P10163 310 aaPredicted RBP16.35■□□□□ 0.21
VAPA-205ENST00000578314 ZNF586Q9NXT0 402 aa16.35■□□□□ 0.21
VAPA-205ENST00000578314 PLA2G2EQ9NZK7 142 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms