RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 ZNF181Q2M3W8 571 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 HSD17B12Q53GQ0 312 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 LINC00483Q53H64 154 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 PABPC1L2AQ5JQF8 200 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 FBXW12Q6X9E4 464 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 TMEM91Q6ZNR0 172 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 OR8I2Q8N0Y5 310 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 OR5A2Q8NGI9 324 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 HIST1H2BAQ96A08 127 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 AMELYQ99218 206 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 PRADC1Q9BSG0 188 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 RTL8AQ9BWD3 113 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 SMIM3Q9BZL3 60 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 COMMD5Q9GZQ3 224 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 PARP12Q9H0J9 701 aaKnown RBP2.93□□□□□ -1.94
NUP88-213ENST00000576862 LPAR5Q9H1C0 372 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 TXNL4BQ9NX01 149 aaKnown RBP2.93□□□□□ -1.94
NUP88-213ENST00000576862 SCP2D1Q9UJQ7 156 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 MUC3AQ02505 3323 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 CEP250Q9BV73 2442 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 SEC16AO15027 2179 aa2.93□□□□□ -1.94
NUP88-213ENST00000576862 EML5Q05BV3 1969 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 ZNF292O60281 2723 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 SCN3AQ9NY46 2000 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 IGHV6-1A0A0B4J1U7 121 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 IGKV1D-43A0A0B4J1Z2 117 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 LOC389332A0A1B0GUA5 103 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 LINC00862A6NCI5 91 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 A8MWP6 167 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 CLDN25C9JDP6 229 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 J3QLW9 94 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 HLA-DPB1P04440 258 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 CSRP1P21291 193 aaKnown RBP2.92□□□□□ -1.94
NUP88-213ENST00000576862 SDC2P34741 201 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 CAV3P56539 151 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 TAS2R46P59540 309 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 RPS11P62280 158 aaKnown RBP eCLIP2.92□□□□□ -1.94
NUP88-213ENST00000576862 GRB2P62993 217 aaKnown RBP2.92□□□□□ -1.94
NUP88-213ENST00000576862 FABP9Q0Z7S8 132 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 DHRS2Q13268 280 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 CDK5R1Q15078 307 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 MMDQ15546 238 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 GUCA2BQ16661 112 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 LINC00299Q6ZSB3 139 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 ZNF767PQ75MW2 155 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 SNX29P2Q8IUI4 249 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 EXOC3-AS1Q8N2X6 119 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 LINC00337Q8N6G1 96 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 CYB561D1Q8N8Q1 229 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 OR1J4Q8NGS1 313 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 OR2T27Q8NH04 317 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 RPS4Y2Q8TD47 263 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 SLC25A46Q96AG3 418 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 SLAMF6Q96DU3 332 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 GNPNAT1Q96EK6 184 aaPredicted RBP2.92□□□□□ -1.94
NUP88-213ENST00000576862 IP6K3Q96PC2 410 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 IMUPQ9GZP8 106 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 RERGLQ9H628 205 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 PARP11Q9NR21 331 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 RBM12B-AS1Q9P1G2 102 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 METTL1Q9UBP6 276 aaKnown RBP2.92□□□□□ -1.94
NUP88-213ENST00000576862 PXMP4Q9Y6I8 212 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 MDC1Q14676 2089 aaKnown RBP2.92□□□□□ -1.94
NUP88-213ENST00000576862 DNAH14Q0VDD8 3507 aa2.92□□□□□ -1.94
NUP88-213ENST00000576862 TNRC6BQ9UPQ9 1833 aaKnown RBP2.91□□□□□ -1.94
NUP88-213ENST00000576862 THADAQ6YHU6 1953 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 ASCC3Q8N3C0 2202 aaKnown RBP2.91□□□□□ -1.94
NUP88-213ENST00000576862 IGLV11-55A0A075B6I3 123 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 IGHV1-69-2A0A0G2JMI3 117 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 A0A0J9YW62 118 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 LOC102725191A0A1B0GVB3 256 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 PEX7O00628 323 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 ISLRO14498 428 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 PIN1P1O15428 100 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 CCL25O15444 150 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 APOMO95445 188 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 NCR2O95944 276 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 GPX1P07203 203 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 UCHL1P09936 223 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 P0DMU3 169 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 FAM231AP0DMU4 169 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 FAM231CP0DMU5 169 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 IGHV3-43DP0DP04 118 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 PPP1CCP36873 323 aaKnown RBP2.91□□□□□ -1.94
NUP88-213ENST00000576862 ATP5G3P48201 142 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 ZNF138P52744 262 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 MP68P56378 58 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 DSCR4P56555 118 aaPredicted RBP2.91□□□□□ -1.94
NUP88-213ENST00000576862 ZNF846Q147U1 533 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 C6orf99Q4VX62 202 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 GLYATL3Q5SZD4 288 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 LCN12Q6JVE5 192 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 Q6Q795 121 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 RASL11AQ6T310 242 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 LYPD2Q6UXB3 125 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 Q6ZR03 302 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 PCP2Q8IVA1 136 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 OTOSQ8NHW6 89 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 RXFP4Q8TDU9 374 aa2.91□□□□□ -1.94
NUP88-213ENST00000576862 DERL3Q96Q80 235 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms