RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 STX12Q86Y82 276 aa9.13□□□□□ -0.95
NPLOC4-213ENST00000573519 NEU1Q99519 415 aa9.13□□□□□ -0.95
NPLOC4-213ENST00000573519 TMEM208Q9BTX3 173 aa9.13□□□□□ -0.95
NPLOC4-213ENST00000573519 NMES1Q9C002 83 aa9.13□□□□□ -0.95
NPLOC4-213ENST00000573519 APLNQ9ULZ1 77 aa9.13□□□□□ -0.95
NPLOC4-213ENST00000573519 WDR83OSQ9Y284 106 aa9.13□□□□□ -0.95
NPLOC4-213ENST00000573519 RFNGQ9Y644 331 aa9.13□□□□□ -0.95
NPLOC4-213ENST00000573519 IGHV4-4A0A075B6R2 117 aa9.12□□□□□ -0.95
NPLOC4-213ENST00000573519 TMEM189A5PLL7 270 aa9.12□□□□□ -0.95
NPLOC4-213ENST00000573519 COX7A2P2O60397 106 aa9.12□□□□□ -0.95
NPLOC4-213ENST00000573519 DUSP14O95147 198 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-213ENST00000573519 HBE1P02100 147 aa9.12□□□□□ -0.95
NPLOC4-213ENST00000573519 RLN2P04090 185 aa9.12□□□□□ -0.95
NPLOC4-213ENST00000573519 SPART-AS1P0CW21 52 aa9.12□□□□□ -0.95
NPLOC4-213ENST00000573519 PRB4P10163 310 aaPredicted RBP9.12□□□□□ -0.95
NPLOC4-213ENST00000573519 HBG1P69891 147 aa9.12□□□□□ -0.95
NPLOC4-213ENST00000573519 HBG2P69892 147 aa9.12□□□□□ -0.95
NPLOC4-213ENST00000573519 NHLH2Q02577 135 aa9.12□□□□□ -0.95
NPLOC4-213ENST00000573519 BAXQ07812 192 aa9.12□□□□□ -0.95
NPLOC4-213ENST00000573519 VWC2Q2TAL6 325 aa9.12□□□□□ -0.95
NPLOC4-213ENST00000573519 LINC00305Q7Z4B0 112 aa9.12□□□□□ -0.95
NPLOC4-213ENST00000573519 TMEM37Q8WXS4 190 aa9.12□□□□□ -0.95
NPLOC4-213ENST00000573519 E5RGE8 158 aa9.11□□□□□ -0.95
NPLOC4-213ENST00000573519 M0R2Z0 102 aa9.11□□□□□ -0.95
NPLOC4-213ENST00000573519 FGF7P21781 194 aa9.11□□□□□ -0.95
NPLOC4-213ENST00000573519 CYCSP99999 105 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-213ENST00000573519 RAB31Q13636 194 aa9.11□□□□□ -0.95
NPLOC4-213ENST00000573519 SPINK13Q1W4C9 94 aa9.11□□□□□ -0.95
NPLOC4-213ENST00000573519 PXDC1Q5TGL8 231 aa9.11□□□□□ -0.95
NPLOC4-213ENST00000573519 MORN5Q5VZ52 161 aa9.11□□□□□ -0.95
NPLOC4-213ENST00000573519 C1orf158Q8N1D5 194 aa9.11□□□□□ -0.95
NPLOC4-213ENST00000573519 OR11H7Q8NGC8 314 aa9.11□□□□□ -0.95
NPLOC4-213ENST00000573519 PPP1R1CQ8WVI7 109 aa9.11□□□□□ -0.95
NPLOC4-213ENST00000573519 PPP1R14DQ9NXH3 145 aa9.11□□□□□ -0.95
NPLOC4-213ENST00000573519 RNF24Q9Y225 148 aa9.11□□□□□ -0.95
NPLOC4-213ENST00000573519 A0A087X0K7 114 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 TRAV5A0A0B4J249 113 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 LOC102723971A0A1B0GUV8 181 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 H3BTX0 84 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 RHOBP62745 196 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 PRR20EP86478 221 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 PRR20CP86479 221 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 PRR20DP86480 221 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 PRR20BP86481 221 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 PRR20AP86496 221 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 HIST1H1AQ02539 215 aaPredicted RBP9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 CLINT1Q14677 625 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 ATP6V1FQ16864 119 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 RRN3P1Q2M238 152 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 FAM222AQ5U5X8 452 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 C10orf113Q5VZT2 155 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 AMTNQ6UX39 209 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 OR5C1Q8NGR4 320 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 THAP6Q8TBB0 222 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 IGF2BP2-AS1Q96M15 143 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 RNF126Q9BV68 326 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 SLC25A31Q9H0C2 315 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 DNAJC4Q9NNZ3 241 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 ALG5Q9Y673 324 aa9.1□□□□□ -0.95
NPLOC4-213ENST00000573519 MRPS12O15235 138 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-213ENST00000573519 INSP01308 110 aa9.09□□□□□ -0.95
NPLOC4-213ENST00000573519 AMBPP02760 352 aa9.09□□□□□ -0.95
NPLOC4-213ENST00000573519 HTN3P15516 51 aa9.09□□□□□ -0.95
NPLOC4-213ENST00000573519 CXCL3P19876 107 aa9.09□□□□□ -0.95
NPLOC4-213ENST00000573519 B2MP61769 119 aa9.09□□□□□ -0.95
NPLOC4-213ENST00000573519 OPCMLQ14982 345 aa9.09□□□□□ -0.95
NPLOC4-213ENST00000573519 PSG3Q16557 428 aa9.09□□□□□ -0.95
NPLOC4-213ENST00000573519 Q6ZRG5 221 aa9.09□□□□□ -0.95
NPLOC4-213ENST00000573519 BPIFA4PQ86YQ2 179 aa9.09□□□□□ -0.95
NPLOC4-213ENST00000573519 SLC39A9Q9NUM3 307 aa9.09□□□□□ -0.95
NPLOC4-213ENST00000573519 PLA2G2EQ9NZK7 142 aa9.09□□□□□ -0.95
NPLOC4-213ENST00000573519 YTHDF2Q9Y5A9 579 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-213ENST00000573519 TRAV12-2A0A075B6T6 113 aa9.08□□□□□ -0.96
NPLOC4-213ENST00000573519 TEX48A0A1B0GUV7 120 aa9.08□□□□□ -0.96
NPLOC4-213ENST00000573519 A8MTW9 85 aa9.08□□□□□ -0.96
NPLOC4-213ENST00000573519 MPC2O95563 127 aa9.08□□□□□ -0.96
NPLOC4-213ENST00000573519 PTTG1O95997 202 aa9.08□□□□□ -0.96
NPLOC4-213ENST00000573519 RPL29P47914 159 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-213ENST00000573519 LCN15Q6UWW0 184 aa9.08□□□□□ -0.96
NPLOC4-213ENST00000573519 BAP18Q8IXM2 172 aa9.08□□□□□ -0.96
NPLOC4-213ENST00000573519 OR8A1Q8NGG7 326 aa9.08□□□□□ -0.96
NPLOC4-213ENST00000573519 RPUSD4Q96CM3 377 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-213ENST00000573519 NIPSNAP3BQ9BS92 247 aa9.08□□□□□ -0.96
NPLOC4-213ENST00000573519 NDUFAF3Q9BU61 184 aa9.08□□□□□ -0.96
NPLOC4-213ENST00000573519 DKK2Q9UBU2 259 aa9.08□□□□□ -0.96
NPLOC4-213ENST00000573519 PXMP4Q9Y6I8 212 aa9.08□□□□□ -0.96
NPLOC4-213ENST00000573519 ZNF705GA8MUZ8 300 aaPredicted RBP9.07□□□□□ -0.96
NPLOC4-213ENST00000573519 BOLA2-SMG1P6H3BVE0 249 aa9.07□□□□□ -0.96
NPLOC4-213ENST00000573519 PRM2P04554 102 aa9.07□□□□□ -0.96
NPLOC4-213ENST00000573519 CXCL2P19875 107 aa9.07□□□□□ -0.96
NPLOC4-213ENST00000573519 GCSAMLQ5JQS6 135 aa9.07□□□□□ -0.96
NPLOC4-213ENST00000573519 OR1L4Q8NGR5 311 aa9.07□□□□□ -0.96
NPLOC4-213ENST00000573519 SLC50A1Q9BRV3 221 aa9.07□□□□□ -0.96
NPLOC4-213ENST00000573519 NPCDR1Q9BY65 106 aa9.07□□□□□ -0.96
NPLOC4-213ENST00000573519 MBD2Q9UBB5 411 aa9.07□□□□□ -0.96
NPLOC4-213ENST00000573519 BIRC6Q9NR09 4857 aa9.06□□□□□ -0.96
NPLOC4-213ENST00000573519 H3BQ15 152 aa9.06□□□□□ -0.96
NPLOC4-213ENST00000573519 SLC17A3O00476 420 aa9.06□□□□□ -0.96
NPLOC4-213ENST00000573519 CRXO43186 299 aaPredicted RBP9.06□□□□□ -0.96
NPLOC4-213ENST00000573519 HTN1P15515 57 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms