RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 CCL3L1P16619 93 aa13.3□□□□□ -0.28
LITAF-209ENST00000571688 TMEM164Q5U3C3 297 aa13.3□□□□□ -0.28
LITAF-209ENST00000571688 TRBV19A0A075B6N1 114 aa13.3□□□□□ -0.28
LITAF-209ENST00000571688 SHISA9B4DS77 424 aa13.3□□□□□ -0.28
LITAF-209ENST00000571688 F8W1H4 67 aa13.3□□□□□ -0.28
LITAF-209ENST00000571688 RITA1Q96K30 269 aa13.3□□□□□ -0.28
LITAF-209ENST00000571688 ZMAT4Q9H898 229 aa13.3□□□□□ -0.28
LITAF-209ENST00000571688 TNFAIP6P98066 277 aaPredicted RBP13.29□□□□□ -0.28
LITAF-209ENST00000571688 TEX36Q5VZQ5 186 aa13.29□□□□□ -0.28
LITAF-209ENST00000571688 SIGLEC15Q6ZMC9 328 aa13.29□□□□□ -0.28
LITAF-209ENST00000571688 E9PLD3 99 aa13.29□□□□□ -0.28
LITAF-209ENST00000571688 J3QR89 54 aa13.29□□□□□ -0.28
LITAF-209ENST00000571688 K7EQM0 130 aa13.29□□□□□ -0.28
LITAF-209ENST00000571688 NPYP01303 97 aa13.29□□□□□ -0.28
LITAF-209ENST00000571688 THBDP07204 575 aa13.29□□□□□ -0.28
LITAF-209ENST00000571688 C17orf77Q96MU5 243 aa13.29□□□□□ -0.28
LITAF-209ENST00000571688 TM2D2Q9BX73 214 aa13.29□□□□□ -0.28
LITAF-209ENST00000571688 HHLA3Q9XRX5 114 aa13.29□□□□□ -0.28
LITAF-209ENST00000571688 PRR33A8MZF0 331 aa13.28□□□□□ -0.28
LITAF-209ENST00000571688 M0R1B8 84 aa13.28□□□□□ -0.28
LITAF-209ENST00000571688 ZNF207O43670 478 aaKnown RBP13.28□□□□□ -0.28
LITAF-209ENST00000571688 IGHV1-46P01743 117 aa13.28□□□□□ -0.28
LITAF-209ENST00000571688 WFDC2Q14508 124 aa13.28□□□□□ -0.28
LITAF-209ENST00000571688 CCDC144NLQ6NUI1 221 aa13.28□□□□□ -0.28
LITAF-209ENST00000571688 A0A1W2PRD5 423 aa13.28□□□□□ -0.28
LITAF-209ENST00000571688 A0A1W2PRF3 423 aa13.28□□□□□ -0.28
LITAF-209ENST00000571688 A0A1W2PRM7 423 aa13.28□□□□□ -0.28
LITAF-209ENST00000571688 FBLL1A6NHQ2 334 aaKnown RBP13.28□□□□□ -0.28
LITAF-209ENST00000571688 VSTM5A8MXK1 200 aa13.28□□□□□ -0.28
LITAF-209ENST00000571688 S100A7AQ86SG5 101 aa13.28□□□□□ -0.28
LITAF-209ENST00000571688 TTTY13Q9BZ97 58 aa13.28□□□□□ -0.28
LITAF-209ENST00000571688 NGBQ9NPG2 151 aa13.28□□□□□ -0.28
LITAF-209ENST00000571688 TMEM238LA0A1B0GVL6 79 aa13.27□□□□□ -0.28
LITAF-209ENST00000571688 RPL27AP46776 148 aaKnown RBP13.27□□□□□ -0.28
LITAF-209ENST00000571688 ODF1Q14990 250 aa13.27□□□□□ -0.28
LITAF-209ENST00000571688 ZNF562Q6V9R5 426 aa13.27□□□□□ -0.28
LITAF-209ENST00000571688 WFDC3Q8IUB2 231 aa13.27□□□□□ -0.28
LITAF-209ENST00000571688 LINC00311Q8N616 119 aa13.27□□□□□ -0.28
LITAF-209ENST00000571688 C8orf49Q96NF6 230 aa13.27□□□□□ -0.28
LITAF-209ENST00000571688 NHP2Q9NX24 153 aaKnown RBP13.27□□□□□ -0.28
LITAF-209ENST00000571688 ATP1A1-AS1Q5TC04 95 aa13.27□□□□□ -0.29
LITAF-209ENST00000571688 CEND1Q8N111 149 aa13.27□□□□□ -0.29
LITAF-209ENST00000571688 LYPD1Q8N2G4 141 aa13.27□□□□□ -0.29
LITAF-209ENST00000571688 PROCRQ9UNN8 238 aa13.27□□□□□ -0.29
LITAF-209ENST00000571688 SVILO95425 2214 aa13.27□□□□□ -0.29
LITAF-209ENST00000571688 TRBV25-1A0A075B6N4 114 aa13.26□□□□□ -0.29
LITAF-209ENST00000571688 SMKR1H3BMG3 65 aa13.26□□□□□ -0.29
LITAF-209ENST00000571688 APELAP0DMC3 54 aa13.26□□□□□ -0.29
LITAF-209ENST00000571688 CKS2P33552 79 aa13.26□□□□□ -0.29
LITAF-209ENST00000571688 SCNM1Q9BWG6 230 aa13.26□□□□□ -0.29
LITAF-209ENST00000571688 TMEM133Q9H2Q1 129 aa13.26□□□□□ -0.29
LITAF-209ENST00000571688 PRB4P10163 310 aaPredicted RBP13.26□□□□□ -0.29
LITAF-209ENST00000571688 PRRC2CQ9Y520 2896 aaKnown RBP13.26□□□□□ -0.29
LITAF-209ENST00000571688 LINC01546A6NGU7 62 aa13.26□□□□□ -0.29
LITAF-209ENST00000571688 IGLL5B9A064 214 aa13.26□□□□□ -0.29
LITAF-209ENST00000571688 TMEM200BQ69YZ2 307 aa13.26□□□□□ -0.29
LITAF-209ENST00000571688 C8orf31Q8N9H6 132 aa13.26□□□□□ -0.29
LITAF-209ENST00000571688 SPAG8Q99932 426 aaPredicted RBP13.26□□□□□ -0.29
LITAF-209ENST00000571688 TMSB15BA0A087X1C1 80 aa13.25□□□□□ -0.29
LITAF-209ENST00000571688 K7EM74 188 aa13.25□□□□□ -0.29
LITAF-209ENST00000571688 FCN3O75636 299 aa13.25□□□□□ -0.29
LITAF-209ENST00000571688 EVI2AP22794 236 aa13.25□□□□□ -0.29
LITAF-209ENST00000571688 MC5RP33032 325 aa13.25□□□□□ -0.29
LITAF-209ENST00000571688 SRSF1Q07955 248 aaKnown RBP eCLIP13.25□□□□□ -0.29
LITAF-209ENST00000571688 SHANK2-AS3Q9BTD1 123 aa13.25□□□□□ -0.29
LITAF-209ENST00000571688 HLA-DRB4P13762 266 aa13.25□□□□□ -0.29
LITAF-209ENST00000571688 HLA-DRB4X5D2U9 266 aa13.25□□□□□ -0.29
LITAF-209ENST00000571688 H3BRN7 92 aa13.24□□□□□ -0.29
LITAF-209ENST00000571688 SH2D1AO60880 128 aa13.24□□□□□ -0.29
LITAF-209ENST00000571688 RAB9AP51151 201 aa13.24□□□□□ -0.29
LITAF-209ENST00000571688 CCL11P51671 97 aa13.24□□□□□ -0.29
LITAF-209ENST00000571688 IGKCP01834 107 aa13.24□□□□□ -0.29
LITAF-209ENST00000571688 TCTEX1D4Q5JR98 221 aa13.24□□□□□ -0.29
LITAF-209ENST00000571688 RASL11BQ9BPW5 248 aa13.24□□□□□ -0.29
LITAF-209ENST00000571688 ICE1Q9Y2F5 2266 aa13.23□□□□□ -0.29
LITAF-209ENST00000571688 SPENQ96T58 3664 aaKnown RBP13.23□□□□□ -0.29
LITAF-209ENST00000571688 C16orf97H3BN30 126 aa13.23□□□□□ -0.29
LITAF-209ENST00000571688 M0R3E3 92 aa13.23□□□□□ -0.29
LITAF-209ENST00000571688 MRPS12O15235 138 aaKnown RBP13.23□□□□□ -0.29
LITAF-209ENST00000571688 CRYGBP07316 175 aa13.23□□□□□ -0.29
LITAF-209ENST00000571688 SH2D6Q7Z4S9 175 aa13.23□□□□□ -0.29
LITAF-209ENST00000571688 ARPC1AQ92747 370 aa13.23□□□□□ -0.29
LITAF-209ENST00000571688 ZNF479Q96JC4 524 aa13.23□□□□□ -0.29
LITAF-209ENST00000571688 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.23□□□□□ -0.29
LITAF-209ENST00000571688 ETDBQ3ZM63 59 aa13.23□□□□□ -0.29
LITAF-209ENST00000571688 TMEM108Q6UXF1 575 aa13.23□□□□□ -0.29
LITAF-209ENST00000571688 TEX22C9J3V5 150 aa13.22□□□□□ -0.29
LITAF-209ENST00000571688 I3L2K1 104 aa13.22□□□□□ -0.29
LITAF-209ENST00000571688 ENSAO43768 121 aaKnown RBP13.22□□□□□ -0.29
LITAF-209ENST00000571688 IGKV1-17P01599 117 aa13.22□□□□□ -0.29
LITAF-209ENST00000571688 FCER1GP30273 86 aa13.22□□□□□ -0.29
LITAF-209ENST00000571688 CKS1BP61024 79 aa13.22□□□□□ -0.29
LITAF-209ENST00000571688 IGHV3-72A0A0B4J1Y9 119 aa13.22□□□□□ -0.29
LITAF-209ENST00000571688 H3BMG7 143 aa13.22□□□□□ -0.29
LITAF-209ENST00000571688 RBP4P02753 201 aa13.22□□□□□ -0.29
LITAF-209ENST00000571688 ZNF502Q8TBZ5 544 aa13.22□□□□□ -0.29
LITAF-209ENST00000571688 MAP1LC3AQ9H492 121 aa13.22□□□□□ -0.29
LITAF-209ENST00000571688 SPAARA0A1B0GVQ0 90 aa13.21□□□□□ -0.29
LITAF-209ENST00000571688 NPIPB5A8MRT5 1133 aa13.21□□□□□ -0.29
LITAF-209ENST00000571688 CNTFRP26992 372 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms