RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TRBV7-1A0A0A6YYK4 115 aa14.08□□□□□ -0.15
SMPD3-211ENST00000568373 C19orf71A6NCJ1 209 aa14.08□□□□□ -0.15
SMPD3-211ENST00000568373 H3BUX3 64 aa14.08□□□□□ -0.15
SMPD3-211ENST00000568373 K7EQM0 130 aa14.08□□□□□ -0.15
SMPD3-211ENST00000568373 PRNTQ86SH4 94 aa14.08□□□□□ -0.15
SMPD3-211ENST00000568373 AAMDCQ9H7C9 122 aa14.08□□□□□ -0.15
SMPD3-211ENST00000568373 ZFAND3Q9H8U3 227 aa14.08□□□□□ -0.15
SMPD3-211ENST00000568373 NAT8BQ9UHF3 227 aa14.08□□□□□ -0.15
SMPD3-211ENST00000568373 A6NDX4 124 aa14.08□□□□□ -0.16
SMPD3-211ENST00000568373 AVPP01185 164 aa14.08□□□□□ -0.16
SMPD3-211ENST00000568373 COL8A1P27658 744 aa14.08□□□□□ -0.16
SMPD3-211ENST00000568373 LY6EQ16553 131 aa14.08□□□□□ -0.16
SMPD3-211ENST00000568373 CLEC19AQ6UXS0 136 aa14.08□□□□□ -0.16
SMPD3-211ENST00000568373 NUP35Q8NFH5 326 aa14.08□□□□□ -0.16
SMPD3-211ENST00000568373 RPP21Q9H633 154 aaKnown RBP14.08□□□□□ -0.16
SMPD3-211ENST00000568373 DIRC3C9JPN6 131 aa14.07□□□□□ -0.16
SMPD3-211ENST00000568373 M0R3E3 92 aa14.07□□□□□ -0.16
SMPD3-211ENST00000568373 P01737 135 aa14.07□□□□□ -0.16
SMPD3-211ENST00000568373 CT83Q5H943 113 aa14.07□□□□□ -0.16
SMPD3-211ENST00000568373 NEU1Q99519 415 aa14.07□□□□□ -0.16
SMPD3-211ENST00000568373 ZMAT5Q9UDW3 170 aaKnown RBP14.07□□□□□ -0.16
SMPD3-211ENST00000568373 DOPEY2Q9Y3R5 2298 aa14.07□□□□□ -0.16
SMPD3-211ENST00000568373 IGHV3OR16-8A0A075B7F1 116 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 GRIFINA4D1Z8 144 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 PSG9Q00887 426 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 C9orf152Q5JTZ5 239 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 RASL11AQ6T310 242 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 CIARTQ8N365 385 aaPredicted RBP14.06□□□□□ -0.16
SMPD3-211ENST00000568373 GBGT1Q8N5D6 347 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 GNB4Q9HAV0 340 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 POLQO75417 2590 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 A0A096LNT2 108 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 A0A1B0GUS0 222 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 HIGD1CA8MV81 97 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 HLA-DQA1P01909 254 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 IGF1P05019 195 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 CRISP2P16562 243 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 RAB4BP61018 213 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 ATP5G2Q06055 141 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 PSG3Q16557 428 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 WIPF2Q8TF74 440 aaPredicted RBP14.06□□□□□ -0.16
SMPD3-211ENST00000568373 DAZAP1Q96EP5 407 aaKnown RBP14.06□□□□□ -0.16
SMPD3-211ENST00000568373 ZNF331Q9NQX6 463 aaPredicted RBP14.06□□□□□ -0.16
SMPD3-211ENST00000568373 LINC00527Q9UJ94 153 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 ZFP30Q9Y2G7 519 aa14.06□□□□□ -0.16
SMPD3-211ENST00000568373 FAM223BA6NKX1 122 aa14.05□□□□□ -0.16
SMPD3-211ENST00000568373 M0QZK8 103 aa14.05□□□□□ -0.16
SMPD3-211ENST00000568373 FAM223AQ8IWN6 122 aa14.05□□□□□ -0.16
SMPD3-211ENST00000568373 TMEM256Q8N2U0 113 aa14.05□□□□□ -0.16
SMPD3-211ENST00000568373 LINC01356Q8N9X3 169 aa14.05□□□□□ -0.16
SMPD3-211ENST00000568373 TMEM18Q96B42 140 aa14.05□□□□□ -0.16
SMPD3-211ENST00000568373 PSG8Q9UQ74 426 aa14.05□□□□□ -0.16
SMPD3-211ENST00000568373 PTPN13Q12923 2485 aa14.05□□□□□ -0.16
SMPD3-211ENST00000568373 A8MWL6 223 aa14.05□□□□□ -0.16
SMPD3-211ENST00000568373 LURAP1LQ8IV03 231 aa14.05□□□□□ -0.16
SMPD3-211ENST00000568373 ATP6V0BQ99437 205 aa14.05□□□□□ -0.16
SMPD3-211ENST00000568373 SMAD5-AS1Q9Y6J3 95 aa14.05□□□□□ -0.16
SMPD3-211ENST00000568373 CSPG4Q6UVK1 2322 aa14.04□□□□□ -0.16
SMPD3-211ENST00000568373 NPIPB6E9PJ23 425 aa14.04□□□□□ -0.16
SMPD3-211ENST00000568373 IGHG2P01859 326 aa14.04□□□□□ -0.16
SMPD3-211ENST00000568373 RAB9AP51151 201 aa14.04□□□□□ -0.16
SMPD3-211ENST00000568373 Q71RC1 249 aaPredicted RBP14.04□□□□□ -0.16
SMPD3-211ENST00000568373 GSN-AS1Q9NRJ2 163 aa14.04□□□□□ -0.16
SMPD3-211ENST00000568373 SERTM2A0A1B0GWG4 89 aa14.03□□□□□ -0.16
SMPD3-211ENST00000568373 ZNF253O75346 499 aa14.03□□□□□ -0.16
SMPD3-211ENST00000568373 CSN1S1P47710 185 aa14.03□□□□□ -0.16
SMPD3-211ENST00000568373 TP53TG3Q9ULZ0 132 aa14.03□□□□□ -0.16
SMPD3-211ENST00000568373 CLPSL1A2RUU4 121 aa14.03□□□□□ -0.16
SMPD3-211ENST00000568373 BUB3O43684 328 aa14.03□□□□□ -0.16
SMPD3-211ENST00000568373 TRGV3P03979 118 aa14.03□□□□□ -0.16
SMPD3-211ENST00000568373 RELQ04864 619 aaPredicted RBP14.03□□□□□ -0.16
SMPD3-211ENST00000568373 CDPF1Q6NVV7 123 aa14.03□□□□□ -0.16
SMPD3-211ENST00000568373 ATP5L2Q7Z4Y8 100 aa14.03□□□□□ -0.16
SMPD3-211ENST00000568373 ARL6IP6Q8N6S5 226 aa14.03□□□□□ -0.16
SMPD3-211ENST00000568373 NUPR1O60356 82 aa14.02□□□□□ -0.16
SMPD3-211ENST00000568373 Q0VG73 95 aa14.02□□□□□ -0.16
SMPD3-211ENST00000568373 TCF24Q7RTU0 167 aa14.02□□□□□ -0.16
SMPD3-211ENST00000568373 OR4B1Q8NGF8 309 aa14.02□□□□□ -0.16
SMPD3-211ENST00000568373 ZC2HC1AQ96GY0 325 aa14.02□□□□□ -0.16
SMPD3-211ENST00000568373 NOL4LQ96MY1 436 aaPredicted RBP14.02□□□□□ -0.16
SMPD3-211ENST00000568373 GFRA4Q9GZZ7 299 aa14.02□□□□□ -0.16
SMPD3-211ENST00000568373 ZNF785A8K8V0 405 aa14.02□□□□□ -0.17
SMPD3-211ENST00000568373 PRB4P10163 310 aaPredicted RBP14.02□□□□□ -0.17
SMPD3-211ENST00000568373 DNLZQ5SXM8 178 aa14.02□□□□□ -0.17
SMPD3-211ENST00000568373 GTSF1Q8WW33 167 aa14.02□□□□□ -0.17
SMPD3-211ENST00000568373 BRI3O95415 125 aa14.01□□□□□ -0.17
SMPD3-211ENST00000568373 APCSP02743 223 aa14.01□□□□□ -0.17
SMPD3-211ENST00000568373 PPIFP30405 207 aaKnown RBP14.01□□□□□ -0.17
SMPD3-211ENST00000568373 KIAA1644Q3SXP7 199 aa14.01□□□□□ -0.17
SMPD3-211ENST00000568373 HIST2H2BCQ6DN03 193 aa14.01□□□□□ -0.17
SMPD3-211ENST00000568373 C16orf54Q6UWD8 224 aa14.01□□□□□ -0.17
SMPD3-211ENST00000568373 A0A1B0GXF2 115 aa14□□□□□ -0.17
SMPD3-211ENST00000568373 FAM231BA6NCW3 169 aa14□□□□□ -0.17
SMPD3-211ENST00000568373 J3QLI3 93 aa14□□□□□ -0.17
SMPD3-211ENST00000568373 BLCAPP62952 87 aa14□□□□□ -0.17
SMPD3-211ENST00000568373 JOSD1Q15040 202 aaPredicted RBP14□□□□□ -0.17
SMPD3-211ENST00000568373 A0A087X0K7 114 aa14□□□□□ -0.17
SMPD3-211ENST00000568373 H3BUA1 57 aa14□□□□□ -0.17
SMPD3-211ENST00000568373 ESDP10768 282 aa14□□□□□ -0.17
SMPD3-211ENST00000568373 LINC00310P59036 64 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms