RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 RSG1Q9BU20 258 aa13.32□□□□□ -0.28
LINC01238-205ENST00000567549 TNFSF18Q9UNG2 199 aa13.32□□□□□ -0.28
LINC01238-205ENST00000567549 RPL7P18124 248 aaKnown RBP13.31□□□□□ -0.28
LINC01238-205ENST00000567549 S100A11P31949 105 aa13.31□□□□□ -0.28
LINC01238-205ENST00000567549 S100A10P60903 97 aa13.31□□□□□ -0.28
LINC01238-205ENST00000567549 ZNF345Q14585 488 aa13.31□□□□□ -0.28
LINC01238-205ENST00000567549 LGALS9BQ3B8N2 356 aa13.31□□□□□ -0.28
LINC01238-205ENST00000567549 TMEM144Q7Z5S9 345 aa13.31□□□□□ -0.28
LINC01238-205ENST00000567549 IGF2BP2-AS1Q96M15 143 aa13.31□□□□□ -0.28
LINC01238-205ENST00000567549 SLC35B3Q9H1N7 401 aa13.31□□□□□ -0.28
LINC01238-205ENST00000567549 MBD2Q9UBB5 411 aa13.31□□□□□ -0.28
LINC01238-205ENST00000567549 IGKV1OR2-108A0A075B7D4 117 aa13.3□□□□□ -0.28
LINC01238-205ENST00000567549 SMCO3A2RU48 225 aa13.3□□□□□ -0.28
LINC01238-205ENST00000567549 E5RGE8 158 aa13.3□□□□□ -0.28
LINC01238-205ENST00000567549 INSP01308 110 aa13.3□□□□□ -0.28
LINC01238-205ENST00000567549 MBPP02686 304 aaPredicted RBP13.3□□□□□ -0.28
LINC01238-205ENST00000567549 CXCL2P19875 107 aa13.3□□□□□ -0.28
LINC01238-205ENST00000567549 PVALBP20472 110 aaPredicted RBP13.3□□□□□ -0.28
LINC01238-205ENST00000567549 DAD1P61803 113 aa13.3□□□□□ -0.28
LINC01238-205ENST00000567549 RNF212Q495C1 297 aa13.3□□□□□ -0.28
LINC01238-205ENST00000567549 TMUB2Q71RG4 321 aa13.3□□□□□ -0.28
LINC01238-205ENST00000567549 KCNRGQ8N5I3 272 aa13.3□□□□□ -0.28
LINC01238-205ENST00000567549 C15orf53Q8NAA6 179 aa13.3□□□□□ -0.28
LINC01238-205ENST00000567549 SLC25A32Q9H2D1 315 aa13.3□□□□□ -0.28
LINC01238-205ENST00000567549 YTHDF2Q9Y5A9 579 aaKnown RBP13.3□□□□□ -0.28
LINC01238-205ENST00000567549 H0YIZ8 118 aa13.29□□□□□ -0.28
LINC01238-205ENST00000567549 K7EPK0 472 aa13.29□□□□□ -0.28
LINC01238-205ENST00000567549 SCGB1D2O95969 90 aa13.29□□□□□ -0.28
LINC01238-205ENST00000567549 ID3Q02535 119 aa13.29□□□□□ -0.28
LINC01238-205ENST00000567549 OPCMLQ14982 345 aa13.29□□□□□ -0.28
LINC01238-205ENST00000567549 PPP1R14DQ9NXH3 145 aa13.29□□□□□ -0.28
LINC01238-205ENST00000567549 HIGD1AQ9Y241 93 aa13.29□□□□□ -0.28
LINC01238-205ENST00000567549 LSM5Q9Y4Y9 91 aaKnown RBP13.29□□□□□ -0.28
LINC01238-205ENST00000567549 A8MTW9 85 aa13.28□□□□□ -0.28
LINC01238-205ENST00000567549 PRSS46E5RG02 174 aa13.28□□□□□ -0.28
LINC01238-205ENST00000567549 FAM3BP58499 235 aaPredicted RBP13.28□□□□□ -0.28
LINC01238-205ENST00000567549 LRRC20Q8TCA0 184 aa13.28□□□□□ -0.28
LINC01238-205ENST00000567549 ARL6Q9H0F7 186 aa13.28□□□□□ -0.28
LINC01238-205ENST00000567549 PSENENQ9NZ42 101 aa13.28□□□□□ -0.28
LINC01238-205ENST00000567549 OR5AC2Q9NZP5 309 aa13.28□□□□□ -0.28
LINC01238-205ENST00000567549 LYRM9A8MSI8 78 aa13.27□□□□□ -0.29
LINC01238-205ENST00000567549 FNDC10F2Z333 226 aa13.27□□□□□ -0.29
LINC01238-205ENST00000567549 F6UB75 175 aa13.27□□□□□ -0.29
LINC01238-205ENST00000567549 HYPMO75409 117 aa13.27□□□□□ -0.29
LINC01238-205ENST00000567549 HTN3P15516 51 aa13.27□□□□□ -0.29
LINC01238-205ENST00000567549 PXDC1Q5TGL8 231 aa13.27□□□□□ -0.29
LINC01238-205ENST00000567549 CYP2G1PQ6ZSU1 146 aa13.27□□□□□ -0.29
LINC01238-205ENST00000567549 TMEM256Q8N2U0 113 aa13.27□□□□□ -0.29
LINC01238-205ENST00000567549 AQP10Q96PS8 301 aa13.27□□□□□ -0.29
LINC01238-205ENST00000567549 KANTRA0A1W2PQU2 76 aa13.26□□□□□ -0.29
LINC01238-205ENST00000567549 PRSS29PA6NIE9 313 aa13.26□□□□□ -0.29
LINC01238-205ENST00000567549 H3BP45 60 aa13.26□□□□□ -0.29
LINC01238-205ENST00000567549 RGS13O14921 159 aa13.26□□□□□ -0.29
LINC01238-205ENST00000567549 TSC22D2O75157 780 aa13.26□□□□□ -0.29
LINC01238-205ENST00000567549 TSPOP30536 169 aa13.26□□□□□ -0.29
LINC01238-205ENST00000567549 DEFB1P60022 68 aa13.26□□□□□ -0.29
LINC01238-205ENST00000567549 VAMP2P63027 116 aa13.26□□□□□ -0.29
LINC01238-205ENST00000567549 IFITM2Q01629 132 aa13.26□□□□□ -0.29
LINC01238-205ENST00000567549 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.26□□□□□ -0.29
LINC01238-205ENST00000567549 C1orf158Q8N1D5 194 aa13.26□□□□□ -0.29
LINC01238-205ENST00000567549 ZNF738Q8NE65 137 aa13.26□□□□□ -0.29
LINC01238-205ENST00000567549 OR10P1Q8NGE3 313 aa13.26□□□□□ -0.29
LINC01238-205ENST00000567549 SHANK2-AS3Q9BTD1 123 aa13.26□□□□□ -0.29
LINC01238-205ENST00000567549 SLC25A39Q9BZJ4 359 aaPredicted RBP13.26□□□□□ -0.29
LINC01238-205ENST00000567549 NPVFQ9HCQ7 196 aa13.26□□□□□ -0.29
LINC01238-205ENST00000567549 RNF222A6NCQ9 220 aa13.25□□□□□ -0.29
LINC01238-205ENST00000567549 H3BRN7 92 aa13.25□□□□□ -0.29
LINC01238-205ENST00000567549 OR5G3P0C626 314 aa13.25□□□□□ -0.29
LINC01238-205ENST00000567549 CNN1P51911 297 aaKnown RBP13.25□□□□□ -0.29
LINC01238-205ENST00000567549 DLK1P80370 383 aa13.25□□□□□ -0.29
LINC01238-205ENST00000567549 SLC51BQ86UW2 128 aa13.25□□□□□ -0.29
LINC01238-205ENST00000567549 SMIM8Q96KF7 97 aa13.25□□□□□ -0.29
LINC01238-205ENST00000567549 RCL1Q9Y2P8 373 aaKnown RBP13.25□□□□□ -0.29
LINC01238-205ENST00000567549 DNAH6Q9C0G6 4158 aa13.24□□□□□ -0.29
LINC01238-205ENST00000567549 TAAR5O14804 337 aa13.24□□□□□ -0.29
LINC01238-205ENST00000567549 LINC00869P0C866 280 aa13.24□□□□□ -0.29
LINC01238-205ENST00000567549 RPL12P30050 165 aaKnown RBP13.24□□□□□ -0.29
LINC01238-205ENST00000567549 TAS2R30P59541 319 aa13.24□□□□□ -0.29
LINC01238-205ENST00000567549 PLP1P60201 277 aa13.24□□□□□ -0.29
LINC01238-205ENST00000567549 ARPC5LQ9BPX5 153 aa13.24□□□□□ -0.29
LINC01238-205ENST00000567549 ATG101Q9BSB4 218 aa13.24□□□□□ -0.29
LINC01238-205ENST00000567549 SLC25A31Q9H0C2 315 aa13.24□□□□□ -0.29
LINC01238-205ENST00000567549 M0R2N4 97 aa13.23□□□□□ -0.29
LINC01238-205ENST00000567549 BCL2L11O43521 198 aa13.23□□□□□ -0.29
LINC01238-205ENST00000567549 SSSCA1O60232 199 aa13.23□□□□□ -0.29
LINC01238-205ENST00000567549 IFNA7P01567 189 aa13.23□□□□□ -0.29
LINC01238-205ENST00000567549 GATA2P23769 480 aaPredicted RBP13.23□□□□□ -0.29
LINC01238-205ENST00000567549 POLR2GP62487 172 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC01238-205ENST00000567549 RHOBP62745 196 aa13.23□□□□□ -0.29
LINC01238-205ENST00000567549 TEPPQ6URK8 271 aa13.23□□□□□ -0.29
LINC01238-205ENST00000567549 AMTNQ6UX39 209 aa13.23□□□□□ -0.29
LINC01238-205ENST00000567549 C20orf173Q96LM9 149 aa13.23□□□□□ -0.29
LINC01238-205ENST00000567549 SCRT1Q9BWW7 348 aa13.23□□□□□ -0.29
LINC01238-205ENST00000567549 C11orf1Q9H5F2 150 aa13.23□□□□□ -0.29
LINC01238-205ENST00000567549 VPS13DQ5THJ4 4388 aa13.22□□□□□ -0.29
LINC01238-205ENST00000567549 A0A087X0K7 114 aa13.22□□□□□ -0.29
LINC01238-205ENST00000567549 MED14OSP0DP75 135 aa13.22□□□□□ -0.29
LINC01238-205ENST00000567549 EIF5AP63241 154 aaKnown RBP13.22□□□□□ -0.29
LINC01238-205ENST00000567549 SPINK13Q1W4C9 94 aa13.22□□□□□ -0.29
LINC01238-205ENST00000567549 TEX261Q6UWH6 196 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms