RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 CSMD3Q7Z407 3707 aa15.77■□□□□ 0.12
NME3-210ENST00000567271 IGKV3-20P01619 116 aa15.77■□□□□ 0.12
NME3-210ENST00000567271 SNRPCP09234 159 aaKnown RBP15.77■□□□□ 0.12
NME3-210ENST00000567271 LCN15Q6UWW0 184 aa15.77■□□□□ 0.12
NME3-210ENST00000567271 CSNK1G2-AS1Q8NCQ2 148 aa15.77■□□□□ 0.12
NME3-210ENST00000567271 OR11H2Q8NH07 326 aa15.77■□□□□ 0.12
NME3-210ENST00000567271 SCGB1C1Q8TD33 95 aa15.77■□□□□ 0.12
NME3-210ENST00000567271 AQP10Q96PS8 301 aa15.77■□□□□ 0.12
NME3-210ENST00000567271 HRH4Q9H3N8 390 aa15.77■□□□□ 0.12
NME3-210ENST00000567271 A0A0J9YWU9 116 aa15.76■□□□□ 0.11
NME3-210ENST00000567271 H3BQ15 152 aa15.76■□□□□ 0.11
NME3-210ENST00000567271 HLA-DMBP28068 263 aa15.76■□□□□ 0.11
NME3-210ENST00000567271 FAM78BQ5VT40 261 aa15.76■□□□□ 0.11
NME3-210ENST00000567271 OR4B1Q8NGF8 309 aa15.76■□□□□ 0.11
NME3-210ENST00000567271 ZNF331Q9NQX6 463 aaPredicted RBP15.76■□□□□ 0.11
NME3-210ENST00000567271 CLEC5AQ9NY25 188 aa15.76■□□□□ 0.11
NME3-210ENST00000567271 PSG3Q16557 428 aa15.75■□□□□ 0.11
NME3-210ENST00000567271 OR2T35Q8NGX2 323 aa15.75■□□□□ 0.11
NME3-210ENST00000567271 SAT2Q96F10 170 aaPredicted RBP15.75■□□□□ 0.11
NME3-210ENST00000567271 SLC50A1Q9BRV3 221 aa15.75■□□□□ 0.11
NME3-210ENST00000567271 C1QTNF4Q9BXJ3 329 aa15.75■□□□□ 0.11
NME3-210ENST00000567271 TMEM14CQ9P0S9 112 aa15.75■□□□□ 0.11
NME3-210ENST00000567271 H3BTX0 84 aa15.74■□□□□ 0.11
NME3-210ENST00000567271 GUK1Q16774 197 aa15.74■□□□□ 0.11
NME3-210ENST00000567271 CASC10Q5T4H9 136 aa15.74■□□□□ 0.11
NME3-210ENST00000567271 ZNF738Q8NE65 137 aa15.74■□□□□ 0.11
NME3-210ENST00000567271 XCL2Q9UBD3 114 aa15.74■□□□□ 0.11
NME3-210ENST00000567271 A8MTW9 85 aa15.73■□□□□ 0.11
NME3-210ENST00000567271 SLC17A3O00476 420 aa15.73■□□□□ 0.11
NME3-210ENST00000567271 PSG9Q00887 426 aa15.73■□□□□ 0.11
NME3-210ENST00000567271 MIR17HGQ75NE6 70 aa15.73■□□□□ 0.11
NME3-210ENST00000567271 IL17DQ8TAD2 202 aa15.73■□□□□ 0.11
NME3-210ENST00000567271 SLC25A2Q9BXI2 301 aa15.73■□□□□ 0.11
NME3-210ENST00000567271 ZNF586Q9NXT0 402 aa15.73■□□□□ 0.11
NME3-210ENST00000567271 G3V3Q6 166 aa15.72■□□□□ 0.11
NME3-210ENST00000567271 DUSP14O95147 198 aaKnown RBP15.72■□□□□ 0.11
NME3-210ENST00000567271 CNN1P51911 297 aaKnown RBP15.72■□□□□ 0.11
NME3-210ENST00000567271 FXYD7P58549 80 aa15.72■□□□□ 0.11
NME3-210ENST00000567271 FFAR4Q5NUL3 377 aa15.72■□□□□ 0.11
NME3-210ENST00000567271 INO80EQ8NBZ0 244 aaPredicted RBP15.72■□□□□ 0.11
NME3-210ENST00000567271 FAM167A-AS1Q96KT0 104 aa15.72■□□□□ 0.11
NME3-210ENST00000567271 MRPL32Q9BYC8 188 aaKnown RBP15.72■□□□□ 0.11
NME3-210ENST00000567271 SLC35B3Q9H1N7 401 aa15.72■□□□□ 0.11
NME3-210ENST00000567271 TNFSF18Q9UNG2 199 aa15.72■□□□□ 0.11
NME3-210ENST00000567271 FXYD6-FXYD2A0A087WZ82 144 aa15.71■□□□□ 0.11
NME3-210ENST00000567271 ZNF705EA8MWA4 302 aaPredicted RBP15.71■□□□□ 0.11
NME3-210ENST00000567271 ZNF705DP0CH99 300 aaPredicted RBP15.71■□□□□ 0.11
NME3-210ENST00000567271 ZNF705BP0CI00 300 aaPredicted RBP15.71■□□□□ 0.11
NME3-210ENST00000567271 HIST1H1EP10412 219 aaKnown RBP15.71■□□□□ 0.11
NME3-210ENST00000567271 ZFAND6Q6FIF0 208 aa15.71■□□□□ 0.11
NME3-210ENST00000567271 RPUSD4Q96CM3 377 aaKnown RBP15.71■□□□□ 0.11
NME3-210ENST00000567271 FUT9Q9Y231 359 aa15.71■□□□□ 0.11
NME3-210ENST00000567271 RFNGQ9Y644 331 aa15.71■□□□□ 0.11
NME3-210ENST00000567271 DYNC2H1Q8NCM8 4307 aaKnown RBP15.7■□□□□ 0.1
NME3-210ENST00000567271 PLECQ15149 4684 aaKnown RBP15.7■□□□□ 0.1
NME3-210ENST00000567271 TRBV19A0A075B6N1 114 aa15.7■□□□□ 0.1
NME3-210ENST00000567271 RNF222A6NCQ9 220 aa15.7■□□□□ 0.1
NME3-210ENST00000567271 ZNF253O75346 499 aa15.7■□□□□ 0.1
NME3-210ENST00000567271 PYYP10082 97 aa15.7■□□□□ 0.1
NME3-210ENST00000567271 ZNF266Q14584 549 aa15.7■□□□□ 0.1
NME3-210ENST00000567271 AMTNQ6UX39 209 aa15.7■□□□□ 0.1
NME3-210ENST00000567271 OR8A1Q8NGG7 326 aa15.7■□□□□ 0.1
NME3-210ENST00000567271 MFFQ9GZY8 342 aa15.7■□□□□ 0.1
NME3-210ENST00000567271 TIMM9Q9Y5J7 89 aa15.7■□□□□ 0.1
NME3-210ENST00000567271 X6R8D5 127 aa15.7■□□□□ 0.1
NME3-210ENST00000567271 ZNF705FA8MVS1 300 aaPredicted RBP15.69■□□□□ 0.1
NME3-210ENST00000567271 C11orf68Q9H3H3 251 aaKnown RBP15.69■□□□□ 0.1
NME3-210ENST00000567271 NDUFB4O95168 129 aa15.68■□□□□ 0.1
NME3-210ENST00000567271 MIFP14174 115 aa15.68■□□□□ 0.1
NME3-210ENST00000567271 Q8NAQ8 132 aa15.68■□□□□ 0.1
NME3-210ENST00000567271 OR51M1Q9H341 326 aa15.68■□□□□ 0.1
NME3-210ENST00000567271 PRB4P10163 310 aaPredicted RBP15.67■□□□□ 0.1
NME3-210ENST00000567271 HIST1H1AQ02539 215 aaPredicted RBP15.67■□□□□ 0.1
NME3-210ENST00000567271 PDE6HQ13956 83 aa15.67■□□□□ 0.1
NME3-210ENST00000567271 ZNF705AQ6ZN79 300 aaPredicted RBP15.67■□□□□ 0.1
NME3-210ENST00000567271 IGHV4-28A0A0C4DH34 117 aa15.66■□□□□ 0.1
NME3-210ENST00000567271 PRAC2D3DTV9 90 aa15.66■□□□□ 0.1
NME3-210ENST00000567271 DEFB4AO15263 64 aa15.66■□□□□ 0.1
NME3-210ENST00000567271 RHOBP62745 196 aa15.66■□□□□ 0.1
NME3-210ENST00000567271 ACOT6Q3I5F7 207 aaPredicted RBP15.66■□□□□ 0.1
NME3-210ENST00000567271 HSD17B11Q8NBQ5 300 aa15.66■□□□□ 0.1
NME3-210ENST00000567271 BLNKQ8WV28 456 aa15.66■□□□□ 0.1
NME3-210ENST00000567271 PAXXQ9BUH6 204 aa15.66■□□□□ 0.1
NME3-210ENST00000567271 RYR3Q15413 4870 aa15.65■□□□□ 0.1
NME3-210ENST00000567271 SMLR1H3BR10 107 aa15.65■□□□□ 0.1
NME3-210ENST00000567271 NBEAP1P0C6P0 100 aa15.65■□□□□ 0.1
NME3-210ENST00000567271 RBMY1A1P0DJD3 496 aaKnown RBP15.65■□□□□ 0.1
NME3-210ENST00000567271 RBMY1CP0DJD4 496 aa15.65■□□□□ 0.1
NME3-210ENST00000567271 M6PRP20645 277 aa15.65■□□□□ 0.1
NME3-210ENST00000567271 RBMY1FQ15415 496 aaKnown RBP15.65■□□□□ 0.1
NME3-210ENST00000567271 OR2G3Q8NGZ4 309 aa15.65■□□□□ 0.1
NME3-210ENST00000567271 RNF141Q8WVD5 230 aa15.65■□□□□ 0.1
NME3-210ENST00000567271 FXYD5Q96DB9 178 aa15.65■□□□□ 0.1
NME3-210ENST00000567271 ZNF503Q96F45 646 aa15.65■□□□□ 0.1
NME3-210ENST00000567271 SACSQ9NZJ4 4579 aa15.65■□□□□ 0.1
NME3-210ENST00000567271 AMBPP02760 352 aa15.64■□□□□ 0.09
NME3-210ENST00000567271 ATP6V0CP27449 155 aa15.64■□□□□ 0.09
NME3-210ENST00000567271 RAB2AP61019 212 aa15.64■□□□□ 0.09
NME3-210ENST00000567271 RPL7L1Q6DKI1 246 aaKnown RBP15.64■□□□□ 0.09
NME3-210ENST00000567271 MRPL53Q96EL3 112 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms