RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 SIT1Q9Y3P8 196 aa19.82■□□□□ 0.76
FANCA-221ENST00000566889 SLC25A17O43808 307 aa19.82■□□□□ 0.76
FANCA-221ENST00000566889 EVI2AP22794 236 aa19.82■□□□□ 0.76
FANCA-221ENST00000566889 TMEM105Q8N8V8 129 aa19.82■□□□□ 0.76
FANCA-221ENST00000566889 SCNM1Q9BWG6 230 aa19.82■□□□□ 0.76
FANCA-221ENST00000566889 TRBV25-1A0A075B6N4 114 aa19.81■□□□□ 0.76
FANCA-221ENST00000566889 CKS2P33552 79 aa19.81■□□□□ 0.76
FANCA-221ENST00000566889 GLRXP35754 106 aa19.81■□□□□ 0.76
FANCA-221ENST00000566889 TAL2Q16559 108 aa19.81■□□□□ 0.76
FANCA-221ENST00000566889 NGBQ9NPG2 151 aa19.81■□□□□ 0.76
FANCA-221ENST00000566889 SLC25A15Q9Y619 301 aa19.81■□□□□ 0.76
FANCA-221ENST00000566889 IGKV2D-26A0A0A0MRZ7 120 aa19.8■□□□□ 0.76
FANCA-221ENST00000566889 LINC01546A6NGU7 62 aa19.8■□□□□ 0.76
FANCA-221ENST00000566889 ODF1Q14990 250 aa19.8■□□□□ 0.76
FANCA-221ENST00000566889 PRR14LQ5THK1 2151 aa19.8■□□□□ 0.76
FANCA-221ENST00000566889 IGHG3P01860 377 aa19.8■□□□□ 0.76
FANCA-221ENST00000566889 ZNF562Q6V9R5 426 aa19.8■□□□□ 0.76
FANCA-221ENST00000566889 ZNF479Q96JC4 524 aa19.8■□□□□ 0.76
FANCA-221ENST00000566889 IGLV3-9A0A075B6K5 115 aa19.79■□□□□ 0.76
FANCA-221ENST00000566889 PRSS47A8MTI9 375 aa19.79■□□□□ 0.76
FANCA-221ENST00000566889 NPYP01303 97 aa19.79■□□□□ 0.76
FANCA-221ENST00000566889 MC5RP33032 325 aa19.79■□□□□ 0.76
FANCA-221ENST00000566889 CCL11P51671 97 aa19.79■□□□□ 0.76
FANCA-221ENST00000566889 MRGPRG-AS1Q2M3A8 158 aa19.79■□□□□ 0.76
FANCA-221ENST00000566889 TMEM108Q6UXF1 575 aa19.79■□□□□ 0.76
FANCA-221ENST00000566889 MTURNQ8N3F0 131 aa19.79■□□□□ 0.76
FANCA-221ENST00000566889 C9orf106Q8NAJ2 232 aa19.79■□□□□ 0.76
FANCA-221ENST00000566889 MRAP2Q96G30 205 aa19.79■□□□□ 0.76
FANCA-221ENST00000566889 KNTC1P50748 2209 aa19.79■□□□□ 0.76
FANCA-221ENST00000566889 K7EM74 188 aa19.79■□□□□ 0.76
FANCA-221ENST00000566889 IGKCP01834 107 aa19.79■□□□□ 0.76
FANCA-221ENST00000566889 SIGLEC15Q6ZMC9 328 aa19.79■□□□□ 0.76
FANCA-221ENST00000566889 LINC00311Q8N616 119 aa19.79■□□□□ 0.76
FANCA-221ENST00000566889 C8orf31Q8N9H6 132 aa19.79■□□□□ 0.76
FANCA-221ENST00000566889 RAI1Q7Z5J4 1906 aaPredicted RBP19.78■□□□□ 0.76
FANCA-221ENST00000566889 RPL27AP46776 148 aaKnown RBP19.78■□□□□ 0.76
FANCA-221ENST00000566889 TNFAIP6P98066 277 aaPredicted RBP19.78■□□□□ 0.76
FANCA-221ENST00000566889 TEX36Q5VZQ5 186 aa19.78■□□□□ 0.76
FANCA-221ENST00000566889 TPSG1Q9NRR2 321 aa19.78■□□□□ 0.76
FANCA-221ENST00000566889 FRYLO94915 3013 aa19.77■□□□□ 0.76
FANCA-221ENST00000566889 Q5PR19 223 aa19.77■□□□□ 0.76
FANCA-221ENST00000566889 MAP1LC3AQ9H492 121 aa19.77■□□□□ 0.76
FANCA-221ENST00000566889 NAV3Q8IVL0 2385 aa19.77■□□□□ 0.75
FANCA-221ENST00000566889 FCER1GP30273 86 aa19.76■□□□□ 0.75
FANCA-221ENST00000566889 ETDBQ3ZM63 59 aa19.76■□□□□ 0.75
FANCA-221ENST00000566889 GAGE13Q4V321 117 aa19.76■□□□□ 0.75
FANCA-221ENST00000566889 KLF17Q5JT82 389 aaPredicted RBP19.76■□□□□ 0.75
FANCA-221ENST00000566889 SHANK2-AS3Q9BTD1 123 aa19.76■□□□□ 0.75
FANCA-221ENST00000566889 FREM2Q5SZK8 3169 aa19.76■□□□□ 0.75
FANCA-221ENST00000566889 IGHV3-21A0A0B4J1V1 117 aa19.75■□□□□ 0.75
FANCA-221ENST00000566889 NPIPB5A8MRT5 1133 aa19.75■□□□□ 0.75
FANCA-221ENST00000566889 ATP5LO75964 103 aa19.75■□□□□ 0.75
FANCA-221ENST00000566889 SRSF6Q13247 344 aaKnown RBP19.75■□□□□ 0.75
FANCA-221ENST00000566889 ARPC1AQ92747 370 aa19.75■□□□□ 0.75
FANCA-221ENST00000566889 PROCRQ9UNN8 238 aa19.75■□□□□ 0.75
FANCA-221ENST00000566889 H3BMG7 143 aa19.74■□□□□ 0.75
FANCA-221ENST00000566889 SH2D6Q7Z4S9 175 aa19.74■□□□□ 0.75
FANCA-221ENST00000566889 RASL11BQ9BPW5 248 aa19.74■□□□□ 0.75
FANCA-221ENST00000566889 HEATR1Q9H583 2144 aaKnown RBP19.74■□□□□ 0.75
FANCA-221ENST00000566889 CEP290O15078 2479 aa19.74■□□□□ 0.75
FANCA-221ENST00000566889 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.74■□□□□ 0.75
FANCA-221ENST00000566889 DPM2O94777 84 aa19.74■□□□□ 0.75
FANCA-221ENST00000566889 DIAPH2-AS1Q14236 149 aa19.74■□□□□ 0.75
FANCA-221ENST00000566889 WFDC3Q8IUB2 231 aa19.74■□□□□ 0.75
FANCA-221ENST00000566889 C8orf49Q96NF6 230 aa19.74■□□□□ 0.75
FANCA-221ENST00000566889 ASCL2Q99929 193 aa19.74■□□□□ 0.75
FANCA-221ENST00000566889 TMEM133Q9H2Q1 129 aa19.74■□□□□ 0.75
FANCA-221ENST00000566889 M0R1B8 84 aa19.73■□□□□ 0.75
FANCA-221ENST00000566889 IGHV1-46P01743 117 aa19.73■□□□□ 0.75
FANCA-221ENST00000566889 PRSS1P07477 247 aa19.73■□□□□ 0.75
FANCA-221ENST00000566889 CCL3L1P16619 93 aa19.73■□□□□ 0.75
FANCA-221ENST00000566889 C12orf74Q32Q52 190 aa19.73■□□□□ 0.75
FANCA-221ENST00000566889 TTTY13Q9BZ97 58 aa19.73■□□□□ 0.75
FANCA-221ENST00000566889 NXT2Q9NPJ8 142 aaKnown RBP19.73■□□□□ 0.75
FANCA-221ENST00000566889 H3BRN7 92 aa19.72■□□□□ 0.75
FANCA-221ENST00000566889 SH2D1AO60880 128 aa19.72■□□□□ 0.75
FANCA-221ENST00000566889 LEPP41159 167 aa19.72■□□□□ 0.75
FANCA-221ENST00000566889 PLGLAQ15195 96 aa19.72■□□□□ 0.75
FANCA-221ENST00000566889 TWIST1Q15672 202 aa19.72■□□□□ 0.75
FANCA-221ENST00000566889 MAFAQ8NHW3 353 aaPredicted RBP19.72■□□□□ 0.75
FANCA-221ENST00000566889 C17orf77Q96MU5 243 aa19.72■□□□□ 0.75
FANCA-221ENST00000566889 MED13Q9UHV7 2174 aa19.72■□□□□ 0.75
FANCA-221ENST00000566889 SMKR1H3BMG3 65 aa19.72■□□□□ 0.75
FANCA-221ENST00000566889 COX8CQ7Z4L0 72 aa19.72■□□□□ 0.75
FANCA-221ENST00000566889 MRPL16Q9NX20 251 aaKnown RBP19.72■□□□□ 0.75
FANCA-221ENST00000566889 PRO0461Q9UI25 63 aa19.72■□□□□ 0.75
FANCA-221ENST00000566889 TRAV26-1A0A087WT03 109 aa19.71■□□□□ 0.75
FANCA-221ENST00000566889 TMSB15BA0A087X1C1 80 aa19.71■□□□□ 0.75
FANCA-221ENST00000566889 C3orf36Q3SXR2 165 aa19.71■□□□□ 0.75
FANCA-221ENST00000566889 TTC9CQ8N5M4 171 aa19.71■□□□□ 0.75
FANCA-221ENST00000566889 ZC2HC1BQ5TFG8 222 aa19.7■□□□□ 0.74
FANCA-221ENST00000566889 TMEM200BQ69YZ2 307 aa19.7■□□□□ 0.74
FANCA-221ENST00000566889 GTSCR1Q86UQ5 136 aa19.7■□□□□ 0.74
FANCA-221ENST00000566889 CEACAM4O75871 244 aa19.7■□□□□ 0.74
FANCA-221ENST00000566889 RRN3P1Q2M238 152 aa19.7■□□□□ 0.74
FANCA-221ENST00000566889 Q6ZS92 163 aa19.7■□□□□ 0.74
FANCA-221ENST00000566889 WFDC12Q8WWY7 111 aa19.7■□□□□ 0.74
FANCA-221ENST00000566889 SPAARA0A1B0GVQ0 90 aa19.69■□□□□ 0.74
FANCA-221ENST00000566889 CRYBA4P53673 196 aa19.69■□□□□ 0.74
FANCA-221ENST00000566889 PDE6HQ13956 83 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms