RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 APOBEC3DQ96AK3 386 aaPredicted RBP2.37□□□□□ -2.03
LINC00560-201ENST00000564593 REEP6Q96HR9 211 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 ARHGAP5-AS1Q96IT6 56 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 BTF3L4Q96K17 158 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 LINC00052Q96N35 136 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 ANAPC13Q9BS18 74 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 PECRQ9BY49 303 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 REG4Q9BYZ8 158 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 LINC00470Q9BZP3 86 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 NAA60Q9H7X0 242 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 SMCO4Q9NRQ5 59 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 CHCHD2Q9Y6H1 151 aaPredicted RBP2.37□□□□□ -2.03
LINC00560-201ENST00000564593 BRCA2P51587 3418 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 CHD8Q9HCK8 2581 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 LOC105371267A0A1B0GV96 52 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 A0A1B0GXF2 115 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 C1orf196B1AJZ1 125 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 C21orf140B9A014 251 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 TRAPPC2LH3BP13 241 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 H3BSH0 61 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 DEGS1O15121 323 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 RER1O15258 196 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 MRPL33O75394 65 aaKnown RBP2.36□□□□□ -2.03
LINC00560-201ENST00000564593 DEDDO75618 318 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 PRH1P02810 166 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 SERPINA7P05543 415 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 SOD3P08294 240 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 SMIM6P0DI80 62 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 SLC25A6P12236 298 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 PTHLHP12272 177 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 PRTN3P24158 256 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 RPL12P30050 165 aaKnown RBP2.36□□□□□ -2.03
LINC00560-201ENST00000564593 CD200P41217 278 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 SULT1A2P50226 295 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 PIGPP57054 158 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 HBG1P69891 147 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 HBG2P69892 147 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 ENDOGQ14249 297 aaKnown RBP2.36□□□□□ -2.03
LINC00560-201ENST00000564593 SLC9A3R2Q15599 337 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 PABPC1L2AQ5JQF8 200 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 OR10K2Q6IF99 312 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 ADM2Q7Z4H4 148 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 AMN1Q8IY45 258 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 C1orf174Q8IYL3 243 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 OR5AS1Q8N127 324 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 SLC25A45Q8N413 288 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 LRRC18Q8N456 261 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 OR5D18Q8NGL1 313 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 OR2V1Q8NHB1 315 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 RNASE11Q8TAA1 199 aaKnown RBP2.36□□□□□ -2.03
LINC00560-201ENST00000564593 NEK7Q8TDX7 302 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 DDA1Q9BW61 102 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 RNF122Q9H9V4 155 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 SLC2A9Q9NRM0 540 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 UQCC1Q9NVA1 299 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 GSKIPQ9P0R6 139 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 PRR14LQ5THK1 2151 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 DOCK10Q96BY6 2186 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 KMT2EQ8IZD2 1858 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 WDR87Q6ZQQ6 2873 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 SDK1Q7Z5N4 2213 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 A0A1B0GW64 132 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 B4DEV8 164 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 ATP6V1G2-DDX39BF2Z307 99 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 H0Y980 276 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 K7ERS5 55 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 GPR31O00270 319 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 ISLRO14498 428 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 PITX3O75364 302 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 OR7C1O76099 320 aaPredicted RBP2.36□□□□□ -2.03
LINC00560-201ENST00000564593 IFNA5P01569 189 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 MT-ND4LP03901 98 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 SFTA3P0C7M3 94 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 CECR9P0C854 216 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 C8orf88P0DMB2 117 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 SLC2A1P11166 492 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 CD79AP11912 226 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 COX6A1P12074 109 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 CRYGSP22914 178 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 LGALS7P47929 136 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 RAB13P51153 203 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 RBM11P57052 281 aaKnown RBP2.36□□□□□ -2.03
LINC00560-201ENST00000564593 KLF3P57682 345 aaPredicted RBP2.36□□□□□ -2.03
LINC00560-201ENST00000564593 TAS2R30P59541 319 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 FGF12P61328 243 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 ERVS71-1P61550 626 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 CCL7P80098 99 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 MSMO1Q15800 293 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 C10orf91Q5T1B1 145 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 AKR1C8PQ5T2L2 129 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 TMEM42Q69YG0 159 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 DEFB119Q8N690 84 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 TCTEX1D1Q8N7M0 179 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 OR2AE1Q8NHA4 323 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 PSMF1Q92530 271 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 PTH2Q96A98 100 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 CMBLQ96DG6 245 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 TVP23CQ96ET8 276 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 OR2H1Q9GZK4 316 aa2.36□□□□□ -2.03
LINC00560-201ENST00000564593 BANF2Q9H503 90 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms