RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 RAB11AP62491 216 aa13.62□□□□□ -0.23
PDXDC1-207ENST00000562119 GFI1BQ5VTD9 330 aa13.62□□□□□ -0.23
PDXDC1-207ENST00000562119 OR1S1Q8NH92 325 aa13.62□□□□□ -0.23
PDXDC1-207ENST00000562119 RPUSD4Q96CM3 377 aaKnown RBP13.62□□□□□ -0.23
PDXDC1-207ENST00000562119 PAIP2BQ9ULR5 123 aaKnown RBP13.62□□□□□ -0.23
PDXDC1-207ENST00000562119 RPL7P18124 248 aaKnown RBP13.61□□□□□ -0.23
PDXDC1-207ENST00000562119 VBP1P61758 197 aa13.61□□□□□ -0.23
PDXDC1-207ENST00000562119 A0A087X0K7 114 aa13.6□□□□□ -0.23
PDXDC1-207ENST00000562119 DAZ2Q13117 558 aaKnown RBP13.6□□□□□ -0.23
PDXDC1-207ENST00000562119 KCNIP3Q9Y2W7 256 aa13.6□□□□□ -0.23
PDXDC1-207ENST00000562119 DISC1C4P0D8 188 aa13.59□□□□□ -0.23
PDXDC1-207ENST00000562119 PITX3O75364 302 aa13.59□□□□□ -0.23
PDXDC1-207ENST00000562119 AKR1C4P17516 323 aa13.59□□□□□ -0.23
PDXDC1-207ENST00000562119 S100A7P31151 101 aa13.59□□□□□ -0.23
PDXDC1-207ENST00000562119 TMEM70Q9BUB7 260 aa13.59□□□□□ -0.23
PDXDC1-207ENST00000562119 LRRC20Q8TCA0 184 aa13.58□□□□□ -0.24
PDXDC1-207ENST00000562119 HIGD1AQ9Y241 93 aa13.58□□□□□ -0.24
PDXDC1-207ENST00000562119 TRGV2A0A075B6R0 118 aa13.57□□□□□ -0.24
PDXDC1-207ENST00000562119 MZT2AQ6P582 158 aa13.57□□□□□ -0.24
PDXDC1-207ENST00000562119 OR51S1Q8NGJ8 323 aa13.57□□□□□ -0.24
PDXDC1-207ENST00000562119 PRAC2D3DTV9 90 aa13.56□□□□□ -0.24
PDXDC1-207ENST00000562119 MRPS12O15235 138 aaKnown RBP13.56□□□□□ -0.24
PDXDC1-207ENST00000562119 RAP2BP61225 183 aa13.56□□□□□ -0.24
PDXDC1-207ENST00000562119 AKR1C1Q04828 323 aa13.56□□□□□ -0.24
PDXDC1-207ENST00000562119 SSBP1Q04837 148 aaKnown RBP13.56□□□□□ -0.24
PDXDC1-207ENST00000562119 SERTAD4-AS1Q5TG53 156 aa13.56□□□□□ -0.24
PDXDC1-207ENST00000562119 LYPD5Q6UWN5 251 aa13.56□□□□□ -0.24
PDXDC1-207ENST00000562119 FUNDC2Q9BWH2 189 aa13.56□□□□□ -0.24
PDXDC1-207ENST00000562119 MSRB1Q9NZV6 116 aa13.56□□□□□ -0.24
PDXDC1-207ENST00000562119 FAM30AQ9NZY2 134 aa13.56□□□□□ -0.24
PDXDC1-207ENST00000562119 ICOSQ9Y6W8 199 aa13.56□□□□□ -0.24
PDXDC1-207ENST00000562119 LRP1Q07954 4544 aaKnown RBP13.55□□□□□ -0.24
PDXDC1-207ENST00000562119 TRAV12-3A0A0B4J271 114 aa13.55□□□□□ -0.24
PDXDC1-207ENST00000562119 J3KRW8 73 aa13.55□□□□□ -0.24
PDXDC1-207ENST00000562119 HYPMO75409 117 aa13.55□□□□□ -0.24
PDXDC1-207ENST00000562119 CYP2G1PQ6ZSU1 146 aa13.55□□□□□ -0.24
PDXDC1-207ENST00000562119 ACOT7LQ6ZUV0 252 aa13.55□□□□□ -0.24
PDXDC1-207ENST00000562119 CCDC190Q86UF4 302 aa13.55□□□□□ -0.24
PDXDC1-207ENST00000562119 C15orf40Q8WUR7 153 aa13.55□□□□□ -0.24
PDXDC1-207ENST00000562119 ZNF331Q9NQX6 463 aaPredicted RBP13.55□□□□□ -0.24
PDXDC1-207ENST00000562119 IGLV5-52A0A0A0MRZ9 124 aa13.54□□□□□ -0.24
PDXDC1-207ENST00000562119 PMS2P5A8MQ11 134 aa13.54□□□□□ -0.24
PDXDC1-207ENST00000562119 PAX4O43316 350 aa13.54□□□□□ -0.24
PDXDC1-207ENST00000562119 ZNF324O75467 553 aaPredicted RBP13.54□□□□□ -0.24
PDXDC1-207ENST00000562119 IL5P05113 134 aa13.54□□□□□ -0.24
PDXDC1-207ENST00000562119 SNRPCP09234 159 aaKnown RBP13.54□□□□□ -0.24
PDXDC1-207ENST00000562119 AKAIN1P0CW23 69 aa13.54□□□□□ -0.24
PDXDC1-207ENST00000562119 PRRT1Q99946 306 aa13.54□□□□□ -0.24
PDXDC1-207ENST00000562119 LINC00467Q9BRT7 94 aa13.54□□□□□ -0.24
PDXDC1-207ENST00000562119 GSN-AS1Q9NRJ2 163 aa13.54□□□□□ -0.24
PDXDC1-207ENST00000562119 FUT9Q9Y231 359 aa13.54□□□□□ -0.24
PDXDC1-207ENST00000562119 LY96Q9Y6Y9 160 aa13.54□□□□□ -0.24
PDXDC1-207ENST00000562119 TRAV9-2A0A087WT02 112 aa13.53□□□□□ -0.24
PDXDC1-207ENST00000562119 LINC00854A0A1B0GVQ3 168 aa13.53□□□□□ -0.24
PDXDC1-207ENST00000562119 OR5G3P0C626 314 aa13.53□□□□□ -0.24
PDXDC1-207ENST00000562119 LINC00869P0C866 280 aa13.53□□□□□ -0.24
PDXDC1-207ENST00000562119 PLP1P60201 277 aa13.53□□□□□ -0.24
PDXDC1-207ENST00000562119 C11orf72Q8NBR9 251 aa13.53□□□□□ -0.24
PDXDC1-207ENST00000562119 PYGO2Q9BRQ0 406 aa13.53□□□□□ -0.24
PDXDC1-207ENST00000562119 TRGV1A0A0A0MS02 117 aa13.52□□□□□ -0.25
PDXDC1-207ENST00000562119 WRBO00258 174 aa13.52□□□□□ -0.25
PDXDC1-207ENST00000562119 SRPXP78539 464 aa13.52□□□□□ -0.25
PDXDC1-207ENST00000562119 PATE2Q6UY27 113 aa13.52□□□□□ -0.25
PDXDC1-207ENST00000562119 CLVS1Q8IUQ0 354 aaPredicted RBP13.52□□□□□ -0.25
PDXDC1-207ENST00000562119 ZBTB8BQ8NAP8 495 aaPredicted RBP13.52□□□□□ -0.25
PDXDC1-207ENST00000562119 SYT8Q8NBV8 401 aa13.52□□□□□ -0.25
PDXDC1-207ENST00000562119 ZNF431Q8TF32 576 aaPredicted RBP13.52□□□□□ -0.25
PDXDC1-207ENST00000562119 SMIM4Q8WVI0 70 aa13.52□□□□□ -0.25
PDXDC1-207ENST00000562119 MIXL1Q9H2W2 232 aa13.52□□□□□ -0.25
PDXDC1-207ENST00000562119 NPIPB6E9PJ23 425 aa13.51□□□□□ -0.25
PDXDC1-207ENST00000562119 ATP6V1G2O95670 118 aa13.51□□□□□ -0.25
PDXDC1-207ENST00000562119 CT45A10P0DMU9 189 aa13.51□□□□□ -0.25
PDXDC1-207ENST00000562119 RPP30P78346 268 aaKnown RBP13.51□□□□□ -0.25
PDXDC1-207ENST00000562119 SPANXN5Q5MJ07 72 aa13.51□□□□□ -0.25
PDXDC1-207ENST00000562119 WFDC10BQ8IUB3 73 aa13.51□□□□□ -0.25
PDXDC1-207ENST00000562119 AP3S1Q92572 193 aa13.51□□□□□ -0.25
PDXDC1-207ENST00000562119 CIB3Q96Q77 187 aaPredicted RBP13.51□□□□□ -0.25
PDXDC1-207ENST00000562119 H3BP45 60 aa13.5□□□□□ -0.25
PDXDC1-207ENST00000562119 SLC17A3O00476 420 aa13.5□□□□□ -0.25
PDXDC1-207ENST00000562119 SYNGR2O43760 224 aa13.5□□□□□ -0.25
PDXDC1-207ENST00000562119 MED6O75586 246 aa13.5□□□□□ -0.25
PDXDC1-207ENST00000562119 IGHV3-53P01767 116 aa13.5□□□□□ -0.25
PDXDC1-207ENST00000562119 PLA2G1BP04054 148 aaKnown RBP13.5□□□□□ -0.25
PDXDC1-207ENST00000562119 CXCL2P19875 107 aa13.5□□□□□ -0.25
PDXDC1-207ENST00000562119 ANXA7P20073 488 aaKnown RBP13.5□□□□□ -0.25
PDXDC1-207ENST00000562119 LCN15Q6UWW0 184 aa13.5□□□□□ -0.25
PDXDC1-207ENST00000562119 VCX3AQ9NNX9 186 aa13.5□□□□□ -0.25
PDXDC1-207ENST00000562119 DNAH8Q96JB1 4490 aa13.49□□□□□ -0.25
PDXDC1-207ENST00000562119 SMCO3A2RU48 225 aa13.49□□□□□ -0.25
PDXDC1-207ENST00000562119 LRCOL1A6NCL2 159 aa13.49□□□□□ -0.25
PDXDC1-207ENST00000562119 H3BTX0 84 aa13.49□□□□□ -0.25
PDXDC1-207ENST00000562119 ANXA3P12429 323 aa13.49□□□□□ -0.25
PDXDC1-207ENST00000562119 MRPS10P82664 201 aaKnown RBP13.49□□□□□ -0.25
PDXDC1-207ENST00000562119 TEPPQ6URK8 271 aa13.49□□□□□ -0.25
PDXDC1-207ENST00000562119 DEFB104AQ8WTQ1 72 aa13.49□□□□□ -0.25
PDXDC1-207ENST00000562119 NTN5Q8WTR8 489 aaPredicted RBP13.49□□□□□ -0.25
PDXDC1-207ENST00000562119 SLC50A1Q9BRV3 221 aa13.49□□□□□ -0.25
PDXDC1-207ENST00000562119 KLF12Q9Y4X4 402 aa13.49□□□□□ -0.25
PDXDC1-207ENST00000562119 DUXBA0A1W2PPF3 345 aa13.48□□□□□ -0.25
PDXDC1-207ENST00000562119 SPINK4O60575 86 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms