RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 ATP6V1FQ16864 119 aa12.64□□□□□ -0.39
SMAD3-210ENST00000559092 C10orf113Q5VZT2 155 aa12.64□□□□□ -0.39
SMAD3-210ENST00000559092 NRARPQ7Z6K4 114 aa12.64□□□□□ -0.39
SMAD3-210ENST00000559092 BPIFA4PQ86YQ2 179 aa12.64□□□□□ -0.39
SMAD3-210ENST00000559092 RNF182Q8N6D2 247 aa12.64□□□□□ -0.39
SMAD3-210ENST00000559092 TMEM37Q8WXS4 190 aa12.64□□□□□ -0.39
SMAD3-210ENST00000559092 IGF2BP2-AS1Q96M15 143 aa12.64□□□□□ -0.39
SMAD3-210ENST00000559092 CELA1Q9UNI1 258 aa12.64□□□□□ -0.39
SMAD3-210ENST00000559092 EPPK1P58107 5090 aaKnown RBP12.63□□□□□ -0.39
SMAD3-210ENST00000559092 IGHV3OR16-12A0A075B7B8 117 aa12.63□□□□□ -0.39
SMAD3-210ENST00000559092 TEX48A0A1B0GUV7 120 aa12.63□□□□□ -0.39
SMAD3-210ENST00000559092 PRR20EP86478 221 aa12.63□□□□□ -0.39
SMAD3-210ENST00000559092 PRR20CP86479 221 aa12.63□□□□□ -0.39
SMAD3-210ENST00000559092 PRR20DP86480 221 aa12.63□□□□□ -0.39
SMAD3-210ENST00000559092 PRR20BP86481 221 aa12.63□□□□□ -0.39
SMAD3-210ENST00000559092 PRR20AP86496 221 aa12.63□□□□□ -0.39
SMAD3-210ENST00000559092 PSG3Q16557 428 aa12.63□□□□□ -0.39
SMAD3-210ENST00000559092 C1orf158Q8N1D5 194 aa12.63□□□□□ -0.39
SMAD3-210ENST00000559092 ZNF738Q8NE65 137 aa12.63□□□□□ -0.39
SMAD3-210ENST00000559092 OR11H7Q8NGC8 314 aa12.63□□□□□ -0.39
SMAD3-210ENST00000559092 OR1L4Q8NGR5 311 aa12.63□□□□□ -0.39
SMAD3-210ENST00000559092 BATF3Q9NR55 127 aa12.63□□□□□ -0.39
SMAD3-210ENST00000559092 APLNQ9ULZ1 77 aa12.63□□□□□ -0.39
SMAD3-210ENST00000559092 IGSF23A1L1A6 192 aa12.62□□□□□ -0.39
SMAD3-210ENST00000559092 HBE1P02100 147 aa12.62□□□□□ -0.39
SMAD3-210ENST00000559092 RLN2P04090 185 aa12.62□□□□□ -0.39
SMAD3-210ENST00000559092 RPL29P47914 159 aaKnown RBP12.62□□□□□ -0.39
SMAD3-210ENST00000559092 B2MP61769 119 aa12.62□□□□□ -0.39
SMAD3-210ENST00000559092 CYCSP99999 105 aaKnown RBP12.62□□□□□ -0.39
SMAD3-210ENST00000559092 LCN15Q6UWW0 184 aa12.62□□□□□ -0.39
SMAD3-210ENST00000559092 OR8A1Q8NGG7 326 aa12.62□□□□□ -0.39
SMAD3-210ENST00000559092 PFDN5Q99471 154 aa12.62□□□□□ -0.39
SMAD3-210ENST00000559092 SLC50A1Q9BRV3 221 aa12.62□□□□□ -0.39
SMAD3-210ENST00000559092 MARVELD1Q9BSK0 173 aa12.62□□□□□ -0.39
SMAD3-210ENST00000559092 RNF126Q9BV68 326 aa12.62□□□□□ -0.39
SMAD3-210ENST00000559092 NMES1Q9C002 83 aa12.62□□□□□ -0.39
SMAD3-210ENST00000559092 DEFB131BA0A096LNP1 70 aa12.61□□□□□ -0.39
SMAD3-210ENST00000559092 INMT-MINDY4F8WBC2 141 aa12.61□□□□□ -0.39
SMAD3-210ENST00000559092 MPDU1O75352 247 aa12.61□□□□□ -0.39
SMAD3-210ENST00000559092 ZNF331Q9NQX6 463 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-210ENST00000559092 EMP1P54849 157 aa12.6□□□□□ -0.39
SMAD3-210ENST00000559092 DEFA1P59665 94 aa12.6□□□□□ -0.39
SMAD3-210ENST00000559092 DEFA3P59666 94 aa12.6□□□□□ -0.39
SMAD3-210ENST00000559092 OPCMLQ14982 345 aa12.6□□□□□ -0.39
SMAD3-210ENST00000559092 GUK1Q16774 197 aa12.6□□□□□ -0.39
SMAD3-210ENST00000559092 RRN3P1Q2M238 152 aa12.6□□□□□ -0.39
SMAD3-210ENST00000559092 MIC13Q5XKP0 118 aa12.6□□□□□ -0.39
SMAD3-210ENST00000559092 TMEM208Q9BTX3 173 aa12.6□□□□□ -0.39
SMAD3-210ENST00000559092 SLC25A31Q9H0C2 315 aa12.6□□□□□ -0.39
SMAD3-210ENST00000559092 SLC39A9Q9NUM3 307 aa12.6□□□□□ -0.39
SMAD3-210ENST00000559092 DKK2Q9UBU2 259 aa12.6□□□□□ -0.39
SMAD3-210ENST00000559092 IGHV4-4A0A075B6R2 117 aa12.59□□□□□ -0.39
SMAD3-210ENST00000559092 E5RGE8 158 aa12.59□□□□□ -0.39
SMAD3-210ENST00000559092 CRXO43186 299 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-210ENST00000559092 INSP01308 110 aa12.59□□□□□ -0.39
SMAD3-210ENST00000559092 IGLC2P0DOY2 106 aa12.59□□□□□ -0.39
SMAD3-210ENST00000559092 BAXQ07812 192 aa12.59□□□□□ -0.39
SMAD3-210ENST00000559092 SPINK13Q1W4C9 94 aa12.59□□□□□ -0.39
SMAD3-210ENST00000559092 RPUSD4Q96CM3 377 aaKnown RBP12.59□□□□□ -0.39
SMAD3-210ENST00000559092 PXMP4Q9Y6I8 212 aa12.59□□□□□ -0.39
SMAD3-210ENST00000559092 UBE2L5PA0A1B0GUS4 154 aa12.58□□□□□ -0.4
SMAD3-210ENST00000559092 LOC102723971A0A1B0GUV8 181 aa12.58□□□□□ -0.4
SMAD3-210ENST00000559092 BOLA2-SMG1P6H3BVE0 249 aa12.58□□□□□ -0.4
SMAD3-210ENST00000559092 M0R2Z0 102 aa12.58□□□□□ -0.4
SMAD3-210ENST00000559092 SIX6O95475 246 aa12.58□□□□□ -0.4
SMAD3-210ENST00000559092 HIST1H1AQ02539 215 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-210ENST00000559092 OXA1LQ15070 435 aa12.58□□□□□ -0.4
SMAD3-210ENST00000559092 MORN5Q5VZ52 161 aa12.58□□□□□ -0.4
SMAD3-210ENST00000559092 ZNF767PQ75MW2 155 aa12.58□□□□□ -0.4
SMAD3-210ENST00000559092 PPP1R14DQ9NXH3 145 aa12.58□□□□□ -0.4
SMAD3-210ENST00000559092 FGF7P21781 194 aa12.57□□□□□ -0.4
SMAD3-210ENST00000559092 RHOBP62745 196 aa12.57□□□□□ -0.4
SMAD3-210ENST00000559092 FAM222AQ5U5X8 452 aa12.57□□□□□ -0.4
SMAD3-210ENST00000559092 TMEM256Q8N2U0 113 aa12.57□□□□□ -0.4
SMAD3-210ENST00000559092 RPP25LQ8N5L8 163 aaKnown RBP12.57□□□□□ -0.4
SMAD3-210ENST00000559092 SAT2Q96F10 170 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-210ENST00000559092 FAM210BQ96KR6 192 aa12.57□□□□□ -0.4
SMAD3-210ENST00000559092 NIPSNAP3BQ9BS92 247 aa12.57□□□□□ -0.4
SMAD3-210ENST00000559092 TRAV5A0A0B4J249 113 aa12.56□□□□□ -0.4
SMAD3-210ENST00000559092 H3BQ15 152 aa12.56□□□□□ -0.4
SMAD3-210ENST00000559092 TSPOP30536 169 aa12.56□□□□□ -0.4
SMAD3-210ENST00000559092 NHLH2Q02577 135 aa12.56□□□□□ -0.4
SMAD3-210ENST00000559092 YTHDF2Q9Y5A9 579 aaKnown RBP12.56□□□□□ -0.4
SMAD3-210ENST00000559092 ZNF253O75346 499 aa12.55□□□□□ -0.4
SMAD3-210ENST00000559092 H2BFSP57053 126 aa12.55□□□□□ -0.4
SMAD3-210ENST00000559092 OR5C1Q8NGR4 320 aa12.55□□□□□ -0.4
SMAD3-210ENST00000559092 OR10J6PQ8NGY7 276 aa12.55□□□□□ -0.4
SMAD3-210ENST00000559092 NDUFAF3Q9BU61 184 aa12.55□□□□□ -0.4
SMAD3-210ENST00000559092 NPCDR1Q9BY65 106 aa12.55□□□□□ -0.4
SMAD3-210ENST00000559092 OR5AC2Q9NZP5 309 aa12.55□□□□□ -0.4
SMAD3-210ENST00000559092 TMEM14CQ9P0S9 112 aa12.55□□□□□ -0.4
SMAD3-210ENST00000559092 VPS13DQ5THJ4 4388 aa12.55□□□□□ -0.4
SMAD3-210ENST00000559092 BIRC6Q9NR09 4857 aa12.54□□□□□ -0.4
SMAD3-210ENST00000559092 H0YIZ8 118 aa12.54□□□□□ -0.4
SMAD3-210ENST00000559092 SLC17A3O00476 420 aa12.54□□□□□ -0.4
SMAD3-210ENST00000559092 SNRPCP09234 159 aaKnown RBP12.54□□□□□ -0.4
SMAD3-210ENST00000559092 CDKN1BP46527 198 aa12.54□□□□□ -0.4
SMAD3-210ENST00000559092 LRRC37A5PQ49AS3 106 aa12.54□□□□□ -0.4
SMAD3-210ENST00000559092 BAP18Q8IXM2 172 aa12.54□□□□□ -0.4
SMAD3-210ENST00000559092 TRAV12-2A0A075B6T6 113 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms