RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 A0A1W2PPM0 123 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 TIMM23O14925 209 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 C8orf31Q8N9H6 132 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 ZNF625Q96I27 306 aaPredicted RBP7.32□□□□□ -1.24
SYNE3-205ENST00000557275 NDUFS6O75380 124 aaKnown RBP7.32□□□□□ -1.24
SYNE3-205ENST00000557275 NDUFB8O95169 186 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 RTBDNQ9BSG5 229 aaPredicted RBP7.31□□□□□ -1.24
SYNE3-205ENST00000557275 A0A1B0GX51 115 aa7.31□□□□□ -1.24
SYNE3-205ENST00000557275 PROB1E7EW31 1015 aa7.31□□□□□ -1.24
SYNE3-205ENST00000557275 MBNL3Q9NUK0 354 aaKnown RBP7.31□□□□□ -1.24
SYNE3-205ENST00000557275 CARD19Q96LW7 228 aa7.31□□□□□ -1.24
SYNE3-205ENST00000557275 KLF5Q13887 457 aaPredicted RBP7.31□□□□□ -1.24
SYNE3-205ENST00000557275 SLC25A16P16260 332 aa7.31□□□□□ -1.24
SYNE3-205ENST00000557275 RNF222A6NCQ9 220 aa7.31□□□□□ -1.24
SYNE3-205ENST00000557275 C7orf69Q9H7B7 122 aa7.31□□□□□ -1.24
SYNE3-205ENST00000557275 A0A0U1RRA0 63 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 MYF5P13349 255 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 FAM104BQ5XKR9 115 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 GLRX5Q86SX6 157 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 AZU1P20160 251 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 GZMMP51124 257 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 REPIN1Q9BWE0 567 aaKnown RBP7.3□□□□□ -1.24
SYNE3-205ENST00000557275 R3HDMLQ9H3Y0 253 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 SMIM2Q9BVW6 85 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 H0YGX0 51 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 GFI1BQ5VTD9 330 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 IGHV3OR16-13A0A075B7E8 117 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 IGHV3-74A0A0B4J1X5 117 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 A6NNC1 897 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 PRSS47A8MTI9 375 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 C17orf98A8MV24 154 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 MORN2Q502X0 79 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 COLCA1Q6ZS62 124 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 CLPSL1A2RUU4 121 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 C15orf32Q32M92 178 aa7.3□□□□□ -1.24
SYNE3-205ENST00000557275 C16orf47Q6ZP98 133 aaPredicted RBP7.3□□□□□ -1.24
SYNE3-205ENST00000557275 PROP1O75360 226 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 IGHV3-48P01763 117 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 GNG5P63218 68 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 TRAV25A0A0B4J276 109 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 A0A1B0GWJ7 208 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 CRYBA4P53673 196 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 HERV-K104P63124 156 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 CEND1Q8N111 149 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 CDKN1BP46527 198 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 KIR2DL5BA0A0G2JN68 375 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 KIR2DL5BA0A0G2JPC4 375 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 KIR2DL5AQ8N109 375 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 C3orf79P0CE67 100 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 C1orf122Q6ZSJ8 110 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 ZNF501Q96CX3 271 aaPredicted RBP7.29□□□□□ -1.24
SYNE3-205ENST00000557275 DAZ1Q9NQZ3 744 aaKnown RBP7.29□□□□□ -1.24
SYNE3-205ENST00000557275 COLCA2A8K830 154 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 COX8AP10176 69 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 MUSTN1Q8IVN3 82 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 TSSC4Q9Y5U2 329 aaPredicted RBP7.29□□□□□ -1.24
SYNE3-205ENST00000557275 WDR83OSQ9Y284 106 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 TCF15Q12870 199 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 METRNQ9UJH8 293 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 IGHV3-66A0A0C4DH42 116 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 HGFACQ04756 655 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 LYZL1Q6UWQ5 148 aa7.29□□□□□ -1.24
SYNE3-205ENST00000557275 IGHV3-49A0A0A0MS15 119 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 A0A0G2JK05 382 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 BSPH1Q075Z2 132 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 SCRT2Q9NQ03 307 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 ID3Q02535 119 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 ETDBQ3ZM63 59 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 GLI3P10071 1580 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 IGHV2OR16-5A0A0B4J2B6 119 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 HOXB3P14651 431 aaPredicted RBP7.28□□□□□ -1.24
SYNE3-205ENST00000557275 LINC01620Q4KN68 170 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 C22orf46C9J442 243 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 TBX6O95947 436 aaPredicted RBP7.28□□□□□ -1.24
SYNE3-205ENST00000557275 SMRP1Q8NCR6 262 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 FNDC1Q4ZHG4 1894 aaPredicted RBP7.28□□□□□ -1.24
SYNE3-205ENST00000557275 TRAV13-1A0A0B4J241 112 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 IGHV3-35A0A0C4DH35 117 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 C17orf100A8MU93 164 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 F8VRH5 84 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 FOXS1O43638 330 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 SH2D6Q7Z4S9 175 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 ZNF462Q96JM2 2506 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 JMJD7-PLA2G4BH0Y9G9 81 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 H0YIZ8 118 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 STPG1Q5TH74 334 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 LEAP2Q969E1 77 aa7.28□□□□□ -1.24
SYNE3-205ENST00000557275 ITGBL1O95965 494 aaPredicted RBP7.27□□□□□ -1.24
SYNE3-205ENST00000557275 TREML4Q6UXN2 200 aa7.27□□□□□ -1.24
SYNE3-205ENST00000557275 CRIM1Q9NZV1 1036 aa7.27□□□□□ -1.24
SYNE3-205ENST00000557275 A0A0G2JMZ2 1700 aa7.27□□□□□ -1.24
SYNE3-205ENST00000557275 LRRC37A2A6NM11 1700 aa7.27□□□□□ -1.24
SYNE3-205ENST00000557275 LRRC37AA6NMS7 1700 aa7.27□□□□□ -1.24
SYNE3-205ENST00000557275 PMS2P5A8MQ11 134 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 LGALS9BQ3B8N2 356 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 LGALS9CQ6DKI2 356 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 ZNF883P0CG24 379 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 HRKO00198 91 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 GREM1O60565 184 aa7.27□□□□□ -1.25
SYNE3-205ENST00000557275 VSIRQ9H7M9 311 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms