RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 HRH4Q9H3N8 390 aa12.22□□□□□ -0.45
NEK9-204ENST00000554258 SLC39A9Q9NUM3 307 aa12.22□□□□□ -0.45
NEK9-204ENST00000554258 RABAC1Q9UI14 185 aa12.22□□□□□ -0.45
NEK9-204ENST00000554258 PXMP4Q9Y6I8 212 aa12.22□□□□□ -0.45
NEK9-204ENST00000554258 VPS13BQ7Z7G8 4022 aa12.21□□□□□ -0.45
NEK9-204ENST00000554258 BORCS7-ASMTA0A0B4J1R7 106 aa12.21□□□□□ -0.45
NEK9-204ENST00000554258 BCL2L11O43521 198 aa12.21□□□□□ -0.45
NEK9-204ENST00000554258 PFDN1O60925 122 aa12.21□□□□□ -0.45
NEK9-204ENST00000554258 HYPMO75409 117 aa12.21□□□□□ -0.45
NEK9-204ENST00000554258 APOHP02749 345 aaPredicted RBP12.21□□□□□ -0.45
NEK9-204ENST00000554258 HLA-DMBP28068 263 aa12.21□□□□□ -0.45
NEK9-204ENST00000554258 LYZP61626 148 aa12.21□□□□□ -0.45
NEK9-204ENST00000554258 B2MP61769 119 aa12.21□□□□□ -0.45
NEK9-204ENST00000554258 ZNF709Q8N972 641 aa12.21□□□□□ -0.45
NEK9-204ENST00000554258 TMEM37Q8WXS4 190 aa12.21□□□□□ -0.45
NEK9-204ENST00000554258 PSMG3Q9BT73 122 aaPredicted RBP12.21□□□□□ -0.45
NEK9-204ENST00000554258 RSG1Q9BU20 258 aa12.21□□□□□ -0.45
NEK9-204ENST00000554258 RHPN1-AS1Q9BWJ2 59 aa12.21□□□□□ -0.45
NEK9-204ENST00000554258 ARL6Q9H0F7 186 aa12.21□□□□□ -0.45
NEK9-204ENST00000554258 KCNIP2Q9NS61 270 aa12.21□□□□□ -0.45
NEK9-204ENST00000554258 ELOA3CA0A087WX78 387 aaPredicted RBP12.2□□□□□ -0.46
NEK9-204ENST00000554258 TRAV25A0A0B4J276 109 aa12.2□□□□□ -0.46
NEK9-204ENST00000554258 C17orf112F2Z3M2 114 aa12.2□□□□□ -0.46
NEK9-204ENST00000554258 BUB3O43684 328 aa12.2□□□□□ -0.46
NEK9-204ENST00000554258 AMBPP02760 352 aa12.2□□□□□ -0.46
NEK9-204ENST00000554258 ORM2P19652 201 aa12.2□□□□□ -0.46
NEK9-204ENST00000554258 ATP6V0CP27449 155 aa12.2□□□□□ -0.46
NEK9-204ENST00000554258 FAM90A2PQ658T7 463 aa12.2□□□□□ -0.46
NEK9-204ENST00000554258 Q6ZRG5 221 aa12.2□□□□□ -0.46
NEK9-204ENST00000554258 Q6ZTC4 211 aa12.2□□□□□ -0.46
NEK9-204ENST00000554258 UBE2DNLQ8IWF7 75 aa12.2□□□□□ -0.46
NEK9-204ENST00000554258 OR2G3Q8NGZ4 309 aa12.2□□□□□ -0.46
NEK9-204ENST00000554258 PBDC1Q9BVG4 233 aa12.2□□□□□ -0.46
NEK9-204ENST00000554258 DNAJC4Q9NNZ3 241 aa12.2□□□□□ -0.46
NEK9-204ENST00000554258 A0A1W2PS18 150 aa12.19□□□□□ -0.46
NEK9-204ENST00000554258 C1orf194Q5T5A4 169 aa12.19□□□□□ -0.46
NEK9-204ENST00000554258 C16orf54Q6UWD8 224 aa12.19□□□□□ -0.46
NEK9-204ENST00000554258 OR1B1Q8NGR6 318 aa12.19□□□□□ -0.46
NEK9-204ENST00000554258 ST8SIA2Q92186 375 aa12.19□□□□□ -0.46
NEK9-204ENST00000554258 GNPNAT1Q96EK6 184 aaPredicted RBP12.19□□□□□ -0.46
NEK9-204ENST00000554258 CSTL1Q9H114 145 aa12.19□□□□□ -0.46
NEK9-204ENST00000554258 PFDN2Q9UHV9 154 aa12.19□□□□□ -0.46
NEK9-204ENST00000554258 RFNGQ9Y644 331 aa12.19□□□□□ -0.46
NEK9-204ENST00000554258 KANTRA0A1W2PQU2 76 aa12.18□□□□□ -0.46
NEK9-204ENST00000554258 H3BRN7 92 aa12.18□□□□□ -0.46
NEK9-204ENST00000554258 J3QL48 77 aa12.18□□□□□ -0.46
NEK9-204ENST00000554258 SERF2P84101 59 aa12.18□□□□□ -0.46
NEK9-204ENST00000554258 HSD17B11Q8NBQ5 300 aa12.18□□□□□ -0.46
NEK9-204ENST00000554258 OR1L4Q8NGR5 311 aa12.18□□□□□ -0.46
NEK9-204ENST00000554258 GLMPQ8WWB7 406 aa12.18□□□□□ -0.46
NEK9-204ENST00000554258 PFDN5Q99471 154 aa12.18□□□□□ -0.46
NEK9-204ENST00000554258 SHANK2-AS3Q9BTD1 123 aa12.18□□□□□ -0.46
NEK9-204ENST00000554258 NDUFAF3Q9BU61 184 aa12.18□□□□□ -0.46
NEK9-204ENST00000554258 SLC25A39Q9BZJ4 359 aaPredicted RBP12.18□□□□□ -0.46
NEK9-204ENST00000554258 TMEM231Q9H6L2 316 aa12.18□□□□□ -0.46
NEK9-204ENST00000554258 HIGD1AQ9Y241 93 aa12.18□□□□□ -0.46
NEK9-204ENST00000554258 IGHV3-49A0A0A0MS15 119 aa12.17□□□□□ -0.46
NEK9-204ENST00000554258 ZNF98A6NK75 572 aa12.17□□□□□ -0.46
NEK9-204ENST00000554258 CD5P06127 495 aa12.17□□□□□ -0.46
NEK9-204ENST00000554258 S100A7P31151 101 aa12.17□□□□□ -0.46
NEK9-204ENST00000554258 ODF3L2Q3SX64 289 aa12.17□□□□□ -0.46
NEK9-204ENST00000554258 S100A7AQ86SG5 101 aa12.17□□□□□ -0.46
NEK9-204ENST00000554258 STOML3Q8TAV4 291 aa12.17□□□□□ -0.46
NEK9-204ENST00000554258 NARS2Q96I59 477 aaKnown RBP12.17□□□□□ -0.46
NEK9-204ENST00000554258 RNF2Q99496 336 aa12.17□□□□□ -0.46
NEK9-204ENST00000554258 SPAG8Q99932 426 aaPredicted RBP12.17□□□□□ -0.46
NEK9-204ENST00000554258 DOK5Q9P104 306 aa12.17□□□□□ -0.46
NEK9-204ENST00000554258 NACAE9PAV3 2078 aa12.16□□□□□ -0.46
NEK9-204ENST00000554258 IGHV3OR16-13A0A075B7E8 117 aa12.16□□□□□ -0.46
NEK9-204ENST00000554258 IGHV3-74A0A0B4J1X5 117 aa12.16□□□□□ -0.46
NEK9-204ENST00000554258 COX7A2P2O60397 106 aa12.16□□□□□ -0.46
NEK9-204ENST00000554258 OR5G3P0C626 314 aa12.16□□□□□ -0.46
NEK9-204ENST00000554258 SPP1P10451 314 aa12.16□□□□□ -0.46
NEK9-204ENST00000554258 EIF5AP63241 154 aaKnown RBP12.16□□□□□ -0.46
NEK9-204ENST00000554258 GCSAMLQ5JQS6 135 aa12.16□□□□□ -0.46
NEK9-204ENST00000554258 FFAR4Q5NUL3 377 aa12.16□□□□□ -0.46
NEK9-204ENST00000554258 C10orf113Q5VZT2 155 aa12.16□□□□□ -0.46
NEK9-204ENST00000554258 ZNF471Q9BX82 626 aaPredicted RBP12.16□□□□□ -0.46
NEK9-204ENST00000554258 NKX2-5P52952 324 aaPredicted RBP12.15□□□□□ -0.46
NEK9-204ENST00000554258 LINC00305Q7Z4B0 112 aa12.15□□□□□ -0.46
NEK9-204ENST00000554258 BAP18Q8IXM2 172 aa12.15□□□□□ -0.46
NEK9-204ENST00000554258 GRAMD2BQ96HH9 432 aa12.15□□□□□ -0.46
NEK9-204ENST00000554258 UHRF2Q96PU4 802 aa12.15□□□□□ -0.46
NEK9-204ENST00000554258 SH3BGRL3Q9H299 93 aa12.15□□□□□ -0.46
NEK9-204ENST00000554258 RNF24Q9Y225 148 aa12.15□□□□□ -0.46
NEK9-204ENST00000554258 IGHV3-66A0A0C4DH42 116 aa12.14□□□□□ -0.47
NEK9-204ENST00000554258 TSPAN4O14817 238 aa12.14□□□□□ -0.47
NEK9-204ENST00000554258 SEC11BP0C7V7 166 aa12.14□□□□□ -0.47
NEK9-204ENST00000554258 M6PRP20645 277 aa12.14□□□□□ -0.47
NEK9-204ENST00000554258 MORN5Q5VZ52 161 aa12.14□□□□□ -0.47
NEK9-204ENST00000554258 SPATA12Q7Z6I5 190 aa12.14□□□□□ -0.47
NEK9-204ENST00000554258 SLC51BQ86UW2 128 aa12.14□□□□□ -0.47
NEK9-204ENST00000554258 SCRT1Q9BWW7 348 aa12.14□□□□□ -0.47
NEK9-204ENST00000554258 SLC25A32Q9H2D1 315 aa12.14□□□□□ -0.47
NEK9-204ENST00000554258 DEFB131BA0A096LNP1 70 aa12.13□□□□□ -0.47
NEK9-204ENST00000554258 MRPS12O15235 138 aaKnown RBP12.13□□□□□ -0.47
NEK9-204ENST00000554258 MBP02144 154 aa12.13□□□□□ -0.47
NEK9-204ENST00000554258 TPT1P13693 172 aaKnown RBP12.13□□□□□ -0.47
NEK9-204ENST00000554258 C4BPBP20851 252 aa12.13□□□□□ -0.47
NEK9-204ENST00000554258 ACOT6Q3I5F7 207 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms