RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 WFDC9Q8NEX5 89 aa11.02□□□□□ -0.65
SHMT2-208ENST00000553868 OR1N2Q8NGR9 330 aa11.02□□□□□ -0.65
SHMT2-208ENST00000553868 ZNF414Q96IQ9 312 aa11.02□□□□□ -0.65
SHMT2-208ENST00000553868 NKX6-2Q9C056 277 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-208ENST00000553868 DAZ1Q9NQZ3 744 aaKnown RBP11.02□□□□□ -0.65
SHMT2-208ENST00000553868 IGHV3OR16-8A0A075B7F1 116 aa11.01□□□□□ -0.65
SHMT2-208ENST00000553868 PAGE4O60829 102 aa11.01□□□□□ -0.65
SHMT2-208ENST00000553868 ATP6V1G1O75348 118 aa11.01□□□□□ -0.65
SHMT2-208ENST00000553868 CD5P06127 495 aa11.01□□□□□ -0.65
SHMT2-208ENST00000553868 OR10J4P0C629 311 aa11.01□□□□□ -0.65
SHMT2-208ENST00000553868 GP9P14770 177 aa11.01□□□□□ -0.65
SHMT2-208ENST00000553868 MEF2BQ02080 365 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-208ENST00000553868 CST9LP1Q5W188 147 aa11.01□□□□□ -0.65
SHMT2-208ENST00000553868 LEMD1Q68G75 181 aa11.01□□□□□ -0.65
SHMT2-208ENST00000553868 FXYD5Q96DB9 178 aa11.01□□□□□ -0.65
SHMT2-208ENST00000553868 ZNF503Q96F45 646 aa11.01□□□□□ -0.65
SHMT2-208ENST00000553868 CITED2Q99967 270 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-208ENST00000553868 ELOVL1Q9BW60 279 aa11.01□□□□□ -0.65
SHMT2-208ENST00000553868 U3KQE9 123 aa11.01□□□□□ -0.65
SHMT2-208ENST00000553868 A0A1W2PRE2 83 aa11□□□□□ -0.65
SHMT2-208ENST00000553868 BUB3O43684 328 aa11□□□□□ -0.65
SHMT2-208ENST00000553868 NBEAP1P0C6P0 100 aa11□□□□□ -0.65
SHMT2-208ENST00000553868 NHLRC4P0CG21 123 aaPredicted RBP11□□□□□ -0.65
SHMT2-208ENST00000553868 PYYP10082 97 aa11□□□□□ -0.65
SHMT2-208ENST00000553868 S100A1P23297 94 aa11□□□□□ -0.65
SHMT2-208ENST00000553868 GALR1P47211 349 aa11□□□□□ -0.65
SHMT2-208ENST00000553868 MEOX2P50222 304 aa11□□□□□ -0.65
SHMT2-208ENST00000553868 ICAM4Q14773 271 aa11□□□□□ -0.65
SHMT2-208ENST00000553868 UNQ9165/PRO28630Q6UXU0 137 aa11□□□□□ -0.65
SHMT2-208ENST00000553868 RXFP4Q8TDU9 374 aa11□□□□□ -0.65
SHMT2-208ENST00000553868 A8MWP6 167 aa10.99□□□□□ -0.65
SHMT2-208ENST00000553868 KRBOX1C9JBD0 128 aa10.99□□□□□ -0.65
SHMT2-208ENST00000553868 C11orf94C9JXX5 98 aa10.99□□□□□ -0.65
SHMT2-208ENST00000553868 ZNF207O43670 478 aaKnown RBP10.99□□□□□ -0.65
SHMT2-208ENST00000553868 PDE6DO43924 150 aa10.99□□□□□ -0.65
SHMT2-208ENST00000553868 ATF4P18848 351 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-208ENST00000553868 UBE2G2P60604 165 aa10.99□□□□□ -0.65
SHMT2-208ENST00000553868 NDUFA11Q86Y39 141 aa10.99□□□□□ -0.65
SHMT2-208ENST00000553868 OR11H1Q8NG94 326 aa10.99□□□□□ -0.65
SHMT2-208ENST00000553868 RARRES2Q99969 163 aa10.99□□□□□ -0.65
SHMT2-208ENST00000553868 SLC35B3Q9H1N7 401 aa10.99□□□□□ -0.65
SHMT2-208ENST00000553868 PEMTQ9UBM1 199 aa10.99□□□□□ -0.65
SHMT2-208ENST00000553868 IGHV7-4-1A0A0J9YVY3 117 aa10.98□□□□□ -0.65
SHMT2-208ENST00000553868 FAM74A7A6NL05 159 aa10.98□□□□□ -0.65
SHMT2-208ENST00000553868 F6UZH7 168 aa10.98□□□□□ -0.65
SHMT2-208ENST00000553868 SYNJ2BPP57105 145 aa10.98□□□□□ -0.65
SHMT2-208ENST00000553868 KLF5Q13887 457 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-208ENST00000553868 PDE6HQ13956 83 aa10.98□□□□□ -0.65
SHMT2-208ENST00000553868 C8orf86Q6ZUL3 223 aa10.98□□□□□ -0.65
SHMT2-208ENST00000553868 ASCL2Q99929 193 aa10.98□□□□□ -0.65
SHMT2-208ENST00000553868 TCEAL7Q9BRU2 100 aa10.98□□□□□ -0.65
SHMT2-208ENST00000553868 SMPXQ9UHP9 88 aa10.98□□□□□ -0.65
SHMT2-208ENST00000553868 A0A1W2PRX2 142 aa10.97□□□□□ -0.65
SHMT2-208ENST00000553868 TMEM218A2RU14 115 aa10.97□□□□□ -0.65
SHMT2-208ENST00000553868 HELTA6NFD8 242 aa10.97□□□□□ -0.65
SHMT2-208ENST00000553868 ZNF785A8K8V0 405 aa10.97□□□□□ -0.65
SHMT2-208ENST00000553868 TMEM250H0YL14 139 aa10.97□□□□□ -0.65
SHMT2-208ENST00000553868 CCL24O00175 119 aa10.97□□□□□ -0.65
SHMT2-208ENST00000553868 IGLC2P0DOY2 106 aa10.97□□□□□ -0.65
SHMT2-208ENST00000553868 SRSF3P84103 164 aaKnown RBP10.97□□□□□ -0.65
SHMT2-208ENST00000553868 EGFEM1PQ0D2K5 195 aa10.97□□□□□ -0.65
SHMT2-208ENST00000553868 DEFB136Q30KP8 78 aa10.97□□□□□ -0.65
SHMT2-208ENST00000553868 C16orf54Q6UWD8 224 aa10.97□□□□□ -0.65
SHMT2-208ENST00000553868 ADAMTSL5Q6ZMM2 481 aa10.97□□□□□ -0.65
SHMT2-208ENST00000553868 C18orf65Q6ZTR6 163 aa10.97□□□□□ -0.65
SHMT2-208ENST00000553868 LYPD1Q8N2G4 141 aa10.97□□□□□ -0.65
SHMT2-208ENST00000553868 BLNKQ8WV28 456 aa10.97□□□□□ -0.65
SHMT2-208ENST00000553868 YTHDF2Q9Y5A9 579 aaKnown RBP10.97□□□□□ -0.65
SHMT2-208ENST00000553868 PLECQ15149 4684 aaKnown RBP10.96□□□□□ -0.65
SHMT2-208ENST00000553868 TRBV19A0A075B6N1 114 aa10.96□□□□□ -0.65
SHMT2-208ENST00000553868 A0A087X0K7 114 aa10.96□□□□□ -0.65
SHMT2-208ENST00000553868 MRPS12O15235 138 aaKnown RBP10.96□□□□□ -0.65
SHMT2-208ENST00000553868 ZNF253O75346 499 aa10.96□□□□□ -0.65
SHMT2-208ENST00000553868 SRP19P09132 144 aaKnown RBP10.96□□□□□ -0.65
SHMT2-208ENST00000553868 PSG9Q00887 426 aa10.96□□□□□ -0.65
SHMT2-208ENST00000553868 TM4SF20Q53R12 229 aa10.96□□□□□ -0.65
SHMT2-208ENST00000553868 ZFAND6Q6FIF0 208 aa10.96□□□□□ -0.65
SHMT2-208ENST00000553868 SIGLEC15Q6ZMC9 328 aa10.96□□□□□ -0.65
SHMT2-208ENST00000553868 GLMPQ8WWB7 406 aa10.96□□□□□ -0.65
SHMT2-208ENST00000553868 RHPN1-AS1Q9BWJ2 59 aa10.96□□□□□ -0.65
SHMT2-208ENST00000553868 ZNF586Q9NXT0 402 aa10.96□□□□□ -0.65
SHMT2-208ENST00000553868 IGHV3-49A0A0A0MS15 119 aa10.95□□□□□ -0.66
SHMT2-208ENST00000553868 IGHV3-66A0A0C4DH42 116 aa10.95□□□□□ -0.66
SHMT2-208ENST00000553868 TMEM213A2RRL7 107 aa10.95□□□□□ -0.66
SHMT2-208ENST00000553868 RBMY1BA6NDE4 496 aaKnown RBP10.95□□□□□ -0.66
SHMT2-208ENST00000553868 RBMY1EA6NEQ0 496 aaKnown RBP10.95□□□□□ -0.66
SHMT2-208ENST00000553868 H3BQ15 152 aa10.95□□□□□ -0.66
SHMT2-208ENST00000553868 APOHP02749 345 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-208ENST00000553868 SFTA3P0C7M3 94 aa10.95□□□□□ -0.66
SHMT2-208ENST00000553868 RBMY1DP0C7P1 496 aaKnown RBP10.95□□□□□ -0.66
SHMT2-208ENST00000553868 MYCNOSP40205 109 aa10.95□□□□□ -0.66
SHMT2-208ENST00000553868 ATP5G3P48201 142 aa10.95□□□□□ -0.66
SHMT2-208ENST00000553868 SLURP1P55000 103 aa10.95□□□□□ -0.66
SHMT2-208ENST00000553868 CD81P60033 236 aa10.95□□□□□ -0.66
SHMT2-208ENST00000553868 RANP62826 216 aaKnown RBP10.95□□□□□ -0.66
SHMT2-208ENST00000553868 FHL3Q13643 280 aa10.95□□□□□ -0.66
SHMT2-208ENST00000553868 SOHLH1Q5JUK2 328 aa10.95□□□□□ -0.66
SHMT2-208ENST00000553868 SAMD13Q5VXD3 122 aa10.95□□□□□ -0.66
SHMT2-208ENST00000553868 RAX2Q96IS3 184 aa10.95□□□□□ -0.66
SHMT2-208ENST00000553868 AAMDCQ9H7C9 122 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms