RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 PTTG1O95997 202 aa13.57□□□□□ -0.24
HDAC4-217ENST00000553145 ZNF705DP0CH99 300 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-217ENST00000553145 ZNF705BP0CI00 300 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-217ENST00000553145 PRB4P10163 310 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-217ENST00000553145 CXCL3P19876 107 aa13.57□□□□□ -0.24
HDAC4-217ENST00000553145 B2MP61769 119 aa13.57□□□□□ -0.24
HDAC4-217ENST00000553145 PSG9Q00887 426 aa13.57□□□□□ -0.24
HDAC4-217ENST00000553145 AMTNQ6UX39 209 aa13.57□□□□□ -0.24
HDAC4-217ENST00000553145 Q6ZRG5 221 aa13.57□□□□□ -0.24
HDAC4-217ENST00000553145 THAP6Q8TBB0 222 aa13.57□□□□□ -0.24
HDAC4-217ENST00000553145 LYSTQ99698 3801 aa13.57□□□□□ -0.24
HDAC4-217ENST00000553145 DNAJC4Q9NNZ3 241 aa13.57□□□□□ -0.24
HDAC4-217ENST00000553145 PXMP4Q9Y6I8 212 aa13.57□□□□□ -0.24
HDAC4-217ENST00000553145 PLECQ15149 4684 aaKnown RBP13.57□□□□□ -0.24
HDAC4-217ENST00000553145 ALMS1Q8TCU4 4167 aa13.56□□□□□ -0.24
HDAC4-217ENST00000553145 TRAV5A0A0B4J249 113 aa13.56□□□□□ -0.24
HDAC4-217ENST00000553145 H3BTX0 84 aa13.56□□□□□ -0.24
HDAC4-217ENST00000553145 MPC2O95563 127 aa13.56□□□□□ -0.24
HDAC4-217ENST00000553145 CNN1P51911 297 aaKnown RBP13.56□□□□□ -0.24
HDAC4-217ENST00000553145 CLINT1Q14677 625 aa13.56□□□□□ -0.24
HDAC4-217ENST00000553145 ZNF705AQ6ZN79 300 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-217ENST00000553145 ZNF738Q8NE65 137 aa13.56□□□□□ -0.24
HDAC4-217ENST00000553145 OR1L4Q8NGR5 311 aa13.56□□□□□ -0.24
HDAC4-217ENST00000553145 PHLDA1Q8WV24 401 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-217ENST00000553145 NPCDR1Q9BY65 106 aa13.56□□□□□ -0.24
HDAC4-217ENST00000553145 RNF24Q9Y225 148 aa13.56□□□□□ -0.24
HDAC4-217ENST00000553145 SLC17A3O00476 420 aa13.55□□□□□ -0.24
HDAC4-217ENST00000553145 BPIFA4PQ86YQ2 179 aa13.55□□□□□ -0.24
HDAC4-217ENST00000553145 PFDN5Q99471 154 aa13.55□□□□□ -0.24
HDAC4-217ENST00000553145 MFFQ9GZY8 342 aa13.55□□□□□ -0.24
HDAC4-217ENST00000553145 DNAH1Q9P2D7 4330 aa13.55□□□□□ -0.24
HDAC4-217ENST00000553145 ZNF705FA8MVS1 300 aaPredicted RBP13.54□□□□□ -0.24
HDAC4-217ENST00000553145 H3BQ15 152 aa13.54□□□□□ -0.24
HDAC4-217ENST00000553145 MPDU1O75352 247 aa13.54□□□□□ -0.24
HDAC4-217ENST00000553145 IGLC2P0DOY2 106 aa13.54□□□□□ -0.24
HDAC4-217ENST00000553145 CXCL2P19875 107 aa13.54□□□□□ -0.24
HDAC4-217ENST00000553145 PSG3Q16557 428 aa13.54□□□□□ -0.24
HDAC4-217ENST00000553145 GCSAMLQ5JQS6 135 aa13.54□□□□□ -0.24
HDAC4-217ENST00000553145 LCN15Q6UWW0 184 aa13.54□□□□□ -0.24
HDAC4-217ENST00000553145 LRRC20Q8TCA0 184 aa13.54□□□□□ -0.24
HDAC4-217ENST00000553145 ZNF331Q9NQX6 463 aaPredicted RBP13.54□□□□□ -0.24
HDAC4-217ENST00000553145 MBD2Q9UBB5 411 aa13.54□□□□□ -0.24
HDAC4-217ENST00000553145 IGHV3OR16-12A0A075B7B8 117 aa13.53□□□□□ -0.24
HDAC4-217ENST00000553145 JTBO76095 146 aa13.53□□□□□ -0.24
HDAC4-217ENST00000553145 C1orf158Q8N1D5 194 aa13.53□□□□□ -0.24
HDAC4-217ENST00000553145 OR11H7Q8NGC8 314 aa13.53□□□□□ -0.24
HDAC4-217ENST00000553145 CELA1Q9UNI1 258 aa13.53□□□□□ -0.24
HDAC4-217ENST00000553145 DUSP14O95147 198 aaKnown RBP13.52□□□□□ -0.25
HDAC4-217ENST00000553145 PET100P0DJ07 73 aa13.52□□□□□ -0.25
HDAC4-217ENST00000553145 OR8A1Q8NGG7 326 aa13.52□□□□□ -0.25
HDAC4-217ENST00000553145 NEU1Q99519 415 aa13.52□□□□□ -0.25
HDAC4-217ENST00000553145 SLC50A1Q9BRV3 221 aa13.52□□□□□ -0.25
HDAC4-217ENST00000553145 WDR61Q9GZS3 305 aaKnown RBP13.52□□□□□ -0.25
HDAC4-217ENST00000553145 HRH4Q9H3N8 390 aa13.52□□□□□ -0.25
HDAC4-217ENST00000553145 HSPB11Q9Y547 144 aa13.52□□□□□ -0.25
HDAC4-217ENST00000553145 HYDINQ4G0P3 5121 aa13.52□□□□□ -0.25
HDAC4-217ENST00000553145 M0R2Z0 102 aa13.51□□□□□ -0.25
HDAC4-217ENST00000553145 HIST1H1AQ02539 215 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-217ENST00000553145 SPINK13Q1W4C9 94 aa13.51□□□□□ -0.25
HDAC4-217ENST00000553145 RPUSD4Q96CM3 377 aaKnown RBP13.51□□□□□ -0.25
HDAC4-217ENST00000553145 SAT2Q96F10 170 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-217ENST00000553145 ATP5SQ99766 215 aa13.51□□□□□ -0.25
HDAC4-217ENST00000553145 ZNF586Q9NXT0 402 aa13.51□□□□□ -0.25
HDAC4-217ENST00000553145 CRXO43186 299 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-217ENST00000553145 RPL12P30050 165 aaKnown RBP13.5□□□□□ -0.25
HDAC4-217ENST00000553145 FCN2Q15485 313 aa13.5□□□□□ -0.25
HDAC4-217ENST00000553145 SMIM3Q9BZL3 60 aa13.5□□□□□ -0.25
HDAC4-217ENST00000553145 KLK5Q9Y337 293 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-217ENST00000553145 PRAC2D3DTV9 90 aa13.49□□□□□ -0.25
HDAC4-217ENST00000553145 LINC00476Q8WZB0 136 aa13.49□□□□□ -0.25
HDAC4-217ENST00000553145 IGF2BP2-AS1Q96M15 143 aa13.49□□□□□ -0.25
HDAC4-217ENST00000553145 GOLT1BQ9Y3E0 138 aa13.49□□□□□ -0.25
HDAC4-217ENST00000553145 SMIM9A6NGZ8 99 aa13.48□□□□□ -0.25
HDAC4-217ENST00000553145 BOLA2-SMG1P6H3BVE0 249 aa13.48□□□□□ -0.25
HDAC4-217ENST00000553145 PYYP10082 97 aa13.48□□□□□ -0.25
HDAC4-217ENST00000553145 Q6ZTC4 211 aa13.48□□□□□ -0.25
HDAC4-217ENST00000553145 ZNF767PQ75MW2 155 aa13.48□□□□□ -0.25
HDAC4-217ENST00000553145 BAP18Q8IXM2 172 aa13.48□□□□□ -0.25
HDAC4-217ENST00000553145 SLC25A2Q9BXI2 301 aa13.48□□□□□ -0.25
HDAC4-217ENST00000553145 TMEM14CQ9P0S9 112 aa13.48□□□□□ -0.25
HDAC4-217ENST00000553145 AMBPP02760 352 aa13.47□□□□□ -0.25
HDAC4-217ENST00000553145 RHOBP62745 196 aa13.47□□□□□ -0.25
HDAC4-217ENST00000553145 GUK1Q16774 197 aa13.47□□□□□ -0.25
HDAC4-217ENST00000553145 C12orf74Q32Q52 190 aa13.47□□□□□ -0.25
HDAC4-217ENST00000553145 MIR17HGQ75NE6 70 aa13.47□□□□□ -0.25
HDAC4-217ENST00000553145 FAM167A-AS1Q96KT0 104 aa13.47□□□□□ -0.25
HDAC4-217ENST00000553145 MED28Q9H204 178 aa13.47□□□□□ -0.25
HDAC4-217ENST00000553145 WFDC1Q9HC57 220 aa13.47□□□□□ -0.25
HDAC4-217ENST00000553145 RFNGQ9Y644 331 aa13.47□□□□□ -0.25
HDAC4-217ENST00000553145 TRBV19A0A075B6N1 114 aa13.46□□□□□ -0.25
HDAC4-217ENST00000553145 TRAV12-2A0A075B6T6 113 aa13.46□□□□□ -0.25
HDAC4-217ENST00000553145 EMP1P54849 157 aa13.46□□□□□ -0.25
HDAC4-217ENST00000553145 KCNIP2Q9NS61 270 aa13.46□□□□□ -0.25
HDAC4-217ENST00000553145 C17orf112F2Z3M2 114 aa13.45□□□□□ -0.26
HDAC4-217ENST00000553145 ZNF253O75346 499 aa13.45□□□□□ -0.26
HDAC4-217ENST00000553145 NDUFB4O95168 129 aa13.45□□□□□ -0.26
HDAC4-217ENST00000553145 INSP01308 110 aa13.45□□□□□ -0.26
HDAC4-217ENST00000553145 HBE1P02100 147 aa13.45□□□□□ -0.26
HDAC4-217ENST00000553145 PRM2P04554 102 aa13.45□□□□□ -0.26
HDAC4-217ENST00000553145 HIST1H1EP10412 219 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms