RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 GGNBP1Q5YKI7 109 aa8.66□□□□□ -1.02
VPS29-211ENST00000553128 C20orf144Q9BQM9 153 aa8.66□□□□□ -1.02
VPS29-211ENST00000553128 TMEM147Q9BVK8 224 aa8.66□□□□□ -1.02
VPS29-211ENST00000553128 RAB26Q9ULW5 256 aa8.66□□□□□ -1.02
VPS29-211ENST00000553128 ICOSQ9Y6W8 199 aa8.66□□□□□ -1.02
VPS29-211ENST00000553128 PAX4O43316 350 aa8.65□□□□□ -1.02
VPS29-211ENST00000553128 ZNF324O75467 553 aaPredicted RBP8.65□□□□□ -1.02
VPS29-211ENST00000553128 CFDP00746 253 aaPredicted RBP8.65□□□□□ -1.02
VPS29-211ENST00000553128 IGHV3-53P01767 116 aa8.65□□□□□ -1.02
VPS29-211ENST00000553128 SNRPCP09234 159 aaKnown RBP8.65□□□□□ -1.02
VPS29-211ENST00000553128 IAPPP10997 89 aa8.65□□□□□ -1.02
VPS29-211ENST00000553128 SMCO1Q147U7 214 aa8.65□□□□□ -1.02
VPS29-211ENST00000553128 LYZL2Q7Z4W2 148 aa8.65□□□□□ -1.02
VPS29-211ENST00000553128 BPIFCQ8NFQ6 507 aa8.65□□□□□ -1.02
VPS29-211ENST00000553128 NTN5Q8WTR8 489 aaPredicted RBP8.65□□□□□ -1.02
VPS29-211ENST00000553128 SHANK2-AS3Q9BTD1 123 aa8.65□□□□□ -1.02
VPS29-211ENST00000553128 GSN-AS1Q9NRJ2 163 aa8.65□□□□□ -1.02
VPS29-211ENST00000553128 MTFP1Q9UDX5 166 aa8.65□□□□□ -1.02
VPS29-211ENST00000553128 PAIP2BQ9ULR5 123 aaKnown RBP8.65□□□□□ -1.02
VPS29-211ENST00000553128 C14orf166Q9Y224 244 aaKnown RBP8.65□□□□□ -1.02
VPS29-211ENST00000553128 TNXBP22105 4242 aa8.65□□□□□ -1.02
VPS29-211ENST00000553128 TRAV9-2A0A087WT02 112 aa8.64□□□□□ -1.03
VPS29-211ENST00000553128 A0A087X0K7 114 aa8.64□□□□□ -1.03
VPS29-211ENST00000553128 TRGV1A0A0A0MS02 117 aa8.64□□□□□ -1.03
VPS29-211ENST00000553128 TRAV12-3A0A0B4J271 114 aa8.64□□□□□ -1.03
VPS29-211ENST00000553128 LINC00854A0A1B0GVQ3 168 aa8.64□□□□□ -1.03
VPS29-211ENST00000553128 PRSS46E5RG02 174 aa8.64□□□□□ -1.03
VPS29-211ENST00000553128 RAB3DO95716 219 aa8.64□□□□□ -1.03
VPS29-211ENST00000553128 CCR6P51684 374 aa8.64□□□□□ -1.03
VPS29-211ENST00000553128 GPR107Q5VW38 600 aa8.64□□□□□ -1.03
VPS29-211ENST00000553128 CCDC190Q86UF4 302 aa8.64□□□□□ -1.03
VPS29-211ENST00000553128 Q8N814 137 aa8.64□□□□□ -1.03
VPS29-211ENST00000553128 C11orf72Q8NBR9 251 aa8.64□□□□□ -1.03
VPS29-211ENST00000553128 FUT9Q9Y231 359 aa8.64□□□□□ -1.03
VPS29-211ENST00000553128 OXTP01178 125 aa8.63□□□□□ -1.03
VPS29-211ENST00000553128 RPL7P18124 248 aaKnown RBP8.63□□□□□ -1.03
VPS29-211ENST00000553128 TBPP20226 339 aa8.63□□□□□ -1.03
VPS29-211ENST00000553128 ATP5IP56385 69 aaPredicted RBP8.63□□□□□ -1.03
VPS29-211ENST00000553128 Q6ZSA8 131 aa8.63□□□□□ -1.03
VPS29-211ENST00000553128 TMEM229BQ8NBD8 167 aa8.63□□□□□ -1.03
VPS29-211ENST00000553128 LRRC20Q8TCA0 184 aa8.63□□□□□ -1.03
VPS29-211ENST00000553128 CACFD1Q9UGQ2 172 aa8.63□□□□□ -1.03
VPS29-211ENST00000553128 GPR132Q9UNW8 380 aa8.63□□□□□ -1.03
VPS29-211ENST00000553128 MRPS12O15235 138 aaKnown RBP8.62□□□□□ -1.03
VPS29-211ENST00000553128 PRAF2O60831 178 aa8.62□□□□□ -1.03
VPS29-211ENST00000553128 STEAP1BQ6NZ63 245 aa8.62□□□□□ -1.03
VPS29-211ENST00000553128 ZBTB8BQ8NAP8 495 aaPredicted RBP8.62□□□□□ -1.03
VPS29-211ENST00000553128 OR1S1Q8NH92 325 aa8.62□□□□□ -1.03
VPS29-211ENST00000553128 ZNF431Q8TF32 576 aaPredicted RBP8.62□□□□□ -1.03
VPS29-211ENST00000553128 C8orf49Q96NF6 230 aa8.62□□□□□ -1.03
VPS29-211ENST00000553128 VCX3BQ9H321 246 aa8.62□□□□□ -1.03
VPS29-211ENST00000553128 HIGD1AQ9Y241 93 aa8.62□□□□□ -1.03
VPS29-211ENST00000553128 KLF12Q9Y4X4 402 aa8.62□□□□□ -1.03
VPS29-211ENST00000553128 PMS2P5A8MQ11 134 aa8.61□□□□□ -1.03
VPS29-211ENST00000553128 H3BTX0 84 aa8.61□□□□□ -1.03
VPS29-211ENST00000553128 C1QBP02746 253 aa8.61□□□□□ -1.03
VPS29-211ENST00000553128 CRYGDP07320 174 aa8.61□□□□□ -1.03
VPS29-211ENST00000553128 CT45A10P0DMU9 189 aa8.61□□□□□ -1.03
VPS29-211ENST00000553128 EVI2AP22794 236 aa8.61□□□□□ -1.03
VPS29-211ENST00000553128 CRYBA4P53673 196 aa8.61□□□□□ -1.03
VPS29-211ENST00000553128 TAS2R19P59542 299 aa8.61□□□□□ -1.03
VPS29-211ENST00000553128 RAB11AP62491 216 aa8.61□□□□□ -1.03
VPS29-211ENST00000553128 YIPF6Q96EC8 236 aa8.61□□□□□ -1.03
VPS29-211ENST00000553128 A0A0B4J2A0 478 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 FAM25AB3EWG3 89 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 FAM25CB3EWG5 89 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 FAM25GB3EWG6 89 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 SLC17A3O00476 420 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 PSCAO43653 123 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 SPINK4O60575 86 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 PITX3O75364 302 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 NCS1P62166 190 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 AKR1C1Q04828 323 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 FHL2Q14192 279 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 WFDC2Q14508 124 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 TEPPQ6URK8 271 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 PATE2Q6UY27 113 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 NEGR1Q7Z3B1 354 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 ST6GAL2Q96JF0 529 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 PYGO2Q9BRQ0 406 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 ZNF331Q9NQX6 463 aaPredicted RBP8.6□□□□□ -1.03
VPS29-211ENST00000553128 SHPKQ9UHJ6 478 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 PRO0255Q9UI72 69 aa8.6□□□□□ -1.03
VPS29-211ENST00000553128 HYPMO75409 117 aa8.59□□□□□ -1.03
VPS29-211ENST00000553128 OR5G3P0C626 314 aa8.59□□□□□ -1.03
VPS29-211ENST00000553128 RAP2BP61225 183 aa8.59□□□□□ -1.03
VPS29-211ENST00000553128 SURF2Q15527 256 aaPredicted RBP8.59□□□□□ -1.03
VPS29-211ENST00000553128 MRPL23Q16540 153 aaKnown RBP8.59□□□□□ -1.03
VPS29-211ENST00000553128 CYP2G1PQ6ZSU1 146 aa8.59□□□□□ -1.03
VPS29-211ENST00000553128 ACOT7LQ6ZUV0 252 aa8.59□□□□□ -1.03
VPS29-211ENST00000553128 SCXQ7RTU7 201 aa8.59□□□□□ -1.03
VPS29-211ENST00000553128 MRPL16Q9NX20 251 aaKnown RBP8.59□□□□□ -1.03
VPS29-211ENST00000553128 HHLA3Q9XRX5 114 aa8.59□□□□□ -1.03
VPS29-211ENST00000553128 E5RGE8 158 aa8.58□□□□□ -1.04
VPS29-211ENST00000553128 K7EP13 123 aa8.58□□□□□ -1.04
VPS29-211ENST00000553128 K7EQD1 137 aa8.58□□□□□ -1.04
VPS29-211ENST00000553128 IL5P05113 134 aa8.58□□□□□ -1.04
VPS29-211ENST00000553128 LINC00869P0C866 280 aa8.58□□□□□ -1.04
VPS29-211ENST00000553128 AKR1C4P17516 323 aa8.58□□□□□ -1.04
VPS29-211ENST00000553128 LINC01620Q4KN68 170 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms