RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 GLMPQ8WWB7 406 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 PHYHIPLQ96FC7 376 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 TMEM147Q9BVK8 224 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 SLC25A32Q9H2D1 315 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 PKD1P98161 4303 aa8.58□□□□□ -1.04
CKAP4-202ENST00000552828 DNAH11Q96DT5 4516 aa8.58□□□□□ -1.04
CKAP4-202ENST00000552828 ZNF705EA8MWA4 302 aaPredicted RBP8.58□□□□□ -1.04
CKAP4-202ENST00000552828 HYPMO75409 117 aa8.58□□□□□ -1.04
CKAP4-202ENST00000552828 LINC00869P0C866 280 aa8.58□□□□□ -1.04
CKAP4-202ENST00000552828 MIFP14174 115 aa8.58□□□□□ -1.04
CKAP4-202ENST00000552828 CAMLGP49069 296 aa8.58□□□□□ -1.04
CKAP4-202ENST00000552828 PXDC1Q5TGL8 231 aa8.58□□□□□ -1.04
CKAP4-202ENST00000552828 SIGLEC15Q6ZMC9 328 aa8.58□□□□□ -1.04
CKAP4-202ENST00000552828 S100A7AQ86SG5 101 aa8.58□□□□□ -1.04
CKAP4-202ENST00000552828 TRPT1Q86TN4 253 aaKnown RBP8.58□□□□□ -1.04
CKAP4-202ENST00000552828 STHQ8IWL8 128 aa8.58□□□□□ -1.04
CKAP4-202ENST00000552828 OR8I2Q8N0Y5 310 aa8.58□□□□□ -1.04
CKAP4-202ENST00000552828 OR5C1Q8NGR4 320 aa8.58□□□□□ -1.04
CKAP4-202ENST00000552828 THAP6Q8TBB0 222 aa8.58□□□□□ -1.04
CKAP4-202ENST00000552828 MBD2Q9UBB5 411 aa8.58□□□□□ -1.04
CKAP4-202ENST00000552828 TNFSF18Q9UNG2 199 aa8.58□□□□□ -1.04
CKAP4-202ENST00000552828 WDR83OSQ9Y284 106 aa8.58□□□□□ -1.04
CKAP4-202ENST00000552828 IGHV4-28A0A0C4DH34 117 aa8.57□□□□□ -1.04
CKAP4-202ENST00000552828 UBE2L5PA0A1B0GUS4 154 aa8.57□□□□□ -1.04
CKAP4-202ENST00000552828 K7EQG2 157 aa8.57□□□□□ -1.04
CKAP4-202ENST00000552828 OR5G3P0C626 314 aa8.57□□□□□ -1.04
CKAP4-202ENST00000552828 SPP1P10451 314 aa8.57□□□□□ -1.04
CKAP4-202ENST00000552828 HLA-DMBP28068 263 aa8.57□□□□□ -1.04
CKAP4-202ENST00000552828 PLP1P60201 277 aa8.57□□□□□ -1.04
CKAP4-202ENST00000552828 MORN3Q6PF18 240 aaPredicted RBP8.57□□□□□ -1.04
CKAP4-202ENST00000552828 LINC00336Q6ZUF6 198 aa8.57□□□□□ -1.04
CKAP4-202ENST00000552828 MGST2Q99735 147 aa8.57□□□□□ -1.04
CKAP4-202ENST00000552828 DOK5Q9P104 306 aa8.57□□□□□ -1.04
CKAP4-202ENST00000552828 HIGD1AQ9Y241 93 aa8.57□□□□□ -1.04
CKAP4-202ENST00000552828 DYNC1H1Q14204 4646 aaKnown RBP8.57□□□□□ -1.04
CKAP4-202ENST00000552828 TRAV10A0A0B4J240 114 aa8.56□□□□□ -1.04
CKAP4-202ENST00000552828 A0A1B0GVY2 172 aa8.56□□□□□ -1.04
CKAP4-202ENST00000552828 ZNF98A6NK75 572 aa8.56□□□□□ -1.04
CKAP4-202ENST00000552828 BCL2L11O43521 198 aa8.56□□□□□ -1.04
CKAP4-202ENST00000552828 MPDU1O75352 247 aa8.56□□□□□ -1.04
CKAP4-202ENST00000552828 FGF7P21781 194 aa8.56□□□□□ -1.04
CKAP4-202ENST00000552828 RPL12P30050 165 aaKnown RBP8.56□□□□□ -1.04
CKAP4-202ENST00000552828 CLINT1Q14677 625 aa8.56□□□□□ -1.04
CKAP4-202ENST00000552828 Q6ZRG5 221 aa8.56□□□□□ -1.04
CKAP4-202ENST00000552828 CSNK1G2-AS1Q8NCQ2 148 aa8.56□□□□□ -1.04
CKAP4-202ENST00000552828 DCANP1Q8TF63 244 aa8.56□□□□□ -1.04
CKAP4-202ENST00000552828 SLC25A39Q9BZJ4 359 aaPredicted RBP8.56□□□□□ -1.04
CKAP4-202ENST00000552828 SLC25A22Q9H936 323 aa8.56□□□□□ -1.04
CKAP4-202ENST00000552828 NRN1Q9NPD7 142 aa8.56□□□□□ -1.04
CKAP4-202ENST00000552828 RNF24Q9Y225 148 aa8.56□□□□□ -1.04
CKAP4-202ENST00000552828 X6R8D5 127 aa8.56□□□□□ -1.04
CKAP4-202ENST00000552828 IGHV4-4A0A075B6R2 117 aa8.55□□□□□ -1.04
CKAP4-202ENST00000552828 ELOA3CA0A087WX78 387 aaPredicted RBP8.55□□□□□ -1.04
CKAP4-202ENST00000552828 KANTRA0A1W2PQU2 76 aa8.55□□□□□ -1.04
CKAP4-202ENST00000552828 GALR1P47211 349 aa8.55□□□□□ -1.04
CKAP4-202ENST00000552828 RPL29P47914 159 aaKnown RBP8.55□□□□□ -1.04
CKAP4-202ENST00000552828 ALKAL2Q6UX46 152 aa8.55□□□□□ -1.04
CKAP4-202ENST00000552828 Q6ZTC4 211 aa8.55□□□□□ -1.04
CKAP4-202ENST00000552828 GPR82Q96P67 336 aa8.55□□□□□ -1.04
CKAP4-202ENST00000552828 SHANK2-AS3Q9BTD1 123 aa8.55□□□□□ -1.04
CKAP4-202ENST00000552828 ARV1Q9H2C2 271 aa8.55□□□□□ -1.04
CKAP4-202ENST00000552828 RNF222A6NCQ9 220 aa8.54□□□□□ -1.04
CKAP4-202ENST00000552828 H3BRN7 92 aa8.54□□□□□ -1.04
CKAP4-202ENST00000552828 COX7A2P2O60397 106 aa8.54□□□□□ -1.04
CKAP4-202ENST00000552828 SNRPD3P62318 126 aaKnown RBP8.54□□□□□ -1.04
CKAP4-202ENST00000552828 MIC13Q5XKP0 118 aa8.54□□□□□ -1.04
CKAP4-202ENST00000552828 PATE2Q6UY27 113 aa8.54□□□□□ -1.04
CKAP4-202ENST00000552828 ATP5SQ99766 215 aa8.54□□□□□ -1.04
CKAP4-202ENST00000552828 SCRT1Q9BWW7 348 aa8.54□□□□□ -1.04
CKAP4-202ENST00000552828 SEPSECSQ9HD40 501 aaKnown RBP8.54□□□□□ -1.04
CKAP4-202ENST00000552828 DNAJC4Q9NNZ3 241 aa8.54□□□□□ -1.04
CKAP4-202ENST00000552828 ABCA13Q86UQ4 5058 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 KNCNA6PVL3 124 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 AMBPP02760 352 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 ZNF688P0C7X2 276 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 RPL7P18124 248 aaKnown RBP8.53□□□□□ -1.04
CKAP4-202ENST00000552828 ID1P41134 155 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 B2MP61769 119 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 SAMD13Q5VXD3 122 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 C10orf113Q5VZT2 155 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 LINC00305Q7Z4B0 112 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 ZNF709Q8N972 641 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 INO80EQ8NBZ0 244 aaPredicted RBP8.53□□□□□ -1.04
CKAP4-202ENST00000552828 OR1L4Q8NGR5 311 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 STOML3Q8TAV4 291 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 PCNPQ8WW12 178 aaKnown RBP8.53□□□□□ -1.04
CKAP4-202ENST00000552828 UHRF2Q96PU4 802 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 PFDN5Q99471 154 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 RSG1Q9BU20 258 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 NPCDR1Q9BY65 106 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 SMIM3Q9BZL3 60 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 WDR61Q9GZS3 305 aaKnown RBP8.53□□□□□ -1.04
CKAP4-202ENST00000552828 SLC39A9Q9NUM3 307 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 PXMP4Q9Y6I8 212 aa8.53□□□□□ -1.04
CKAP4-202ENST00000552828 AGRNO00468 2067 aa8.52□□□□□ -1.05
CKAP4-202ENST00000552828 IFNA5P01569 189 aa8.52□□□□□ -1.05
CKAP4-202ENST00000552828 MED14OSP0DP75 135 aa8.52□□□□□ -1.05
CKAP4-202ENST00000552828 MEOX2P50222 304 aa8.52□□□□□ -1.05
CKAP4-202ENST00000552828 C12orf74Q32Q52 190 aa8.52□□□□□ -1.05
CKAP4-202ENST00000552828 PSMG4Q5JS54 123 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms