RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 RNF182Q8N6D2 247 aa18.94■□□□□ 0.62
CPSF6-205ENST00000550075 PARD6GQ9BYG4 376 aaPredicted RBP18.94■□□□□ 0.62
CPSF6-205ENST00000550075 HRH4Q9H3N8 390 aa18.94■□□□□ 0.62
CPSF6-205ENST00000550075 F6UB75 175 aa18.93■□□□□ 0.62
CPSF6-205ENST00000550075 DUSP14O95147 198 aaKnown RBP18.93■□□□□ 0.62
CPSF6-205ENST00000550075 FAM78BQ5VT40 261 aa18.93■□□□□ 0.62
CPSF6-205ENST00000550075 AQP10Q96PS8 301 aa18.93■□□□□ 0.62
CPSF6-205ENST00000550075 CLEC5AQ9NY25 188 aa18.93■□□□□ 0.62
CPSF6-205ENST00000550075 IGLC2P0DOY2 106 aa18.92■□□□□ 0.62
CPSF6-205ENST00000550075 PSG3Q16557 428 aa18.92■□□□□ 0.62
CPSF6-205ENST00000550075 CASC10Q5T4H9 136 aa18.92■□□□□ 0.62
CPSF6-205ENST00000550075 IGFL4Q6B9Z1 124 aa18.92■□□□□ 0.62
CPSF6-205ENST00000550075 MRPL32Q9BYC8 188 aaKnown RBP18.92■□□□□ 0.62
CPSF6-205ENST00000550075 ZNF331Q9NQX6 463 aaPredicted RBP18.92■□□□□ 0.62
CPSF6-205ENST00000550075 TMEM14CQ9P0S9 112 aa18.92■□□□□ 0.62
CPSF6-205ENST00000550075 XCL2Q9UBD3 114 aa18.92■□□□□ 0.62
CPSF6-205ENST00000550075 TRAV5A0A0B4J249 113 aa18.91■□□□□ 0.62
CPSF6-205ENST00000550075 PSG9Q00887 426 aa18.91■□□□□ 0.62
CPSF6-205ENST00000550075 ZNF266Q14584 549 aa18.91■□□□□ 0.62
CPSF6-205ENST00000550075 GCSAMLQ5JQS6 135 aa18.91■□□□□ 0.62
CPSF6-205ENST00000550075 INO80EQ8NBZ0 244 aaPredicted RBP18.91■□□□□ 0.62
CPSF6-205ENST00000550075 OR2T35Q8NGX2 323 aa18.91■□□□□ 0.62
CPSF6-205ENST00000550075 C11orf68Q9H3H3 251 aaKnown RBP18.91■□□□□ 0.62
CPSF6-205ENST00000550075 ZFAND6Q6FIF0 208 aa18.9■□□□□ 0.62
CPSF6-205ENST00000550075 FFAR4Q5NUL3 377 aa18.89■□□□□ 0.61
CPSF6-205ENST00000550075 FXYD6-FXYD2A0A087WZ82 144 aa18.88■□□□□ 0.61
CPSF6-205ENST00000550075 A8MTW9 85 aa18.88■□□□□ 0.61
CPSF6-205ENST00000550075 ZNF705EA8MWA4 302 aaPredicted RBP18.88■□□□□ 0.61
CPSF6-205ENST00000550075 H3BQ15 152 aa18.88■□□□□ 0.61
CPSF6-205ENST00000550075 ZNF253O75346 499 aa18.88■□□□□ 0.61
CPSF6-205ENST00000550075 SNRPCP09234 159 aaKnown RBP18.88■□□□□ 0.61
CPSF6-205ENST00000550075 MIFP14174 115 aa18.88■□□□□ 0.61
CPSF6-205ENST00000550075 CNN1P51911 297 aaKnown RBP18.88■□□□□ 0.61
CPSF6-205ENST00000550075 CSNK1G2-AS1Q8NCQ2 148 aa18.88■□□□□ 0.61
CPSF6-205ENST00000550075 RPUSD4Q96CM3 377 aaKnown RBP18.88■□□□□ 0.61
CPSF6-205ENST00000550075 MFFQ9GZY8 342 aa18.88■□□□□ 0.61
CPSF6-205ENST00000550075 WFDC1Q9HC57 220 aa18.88■□□□□ 0.61
CPSF6-205ENST00000550075 H3BTX0 84 aa18.87■□□□□ 0.61
CPSF6-205ENST00000550075 SLC17A3O00476 420 aa18.87■□□□□ 0.61
CPSF6-205ENST00000550075 AMBPP02760 352 aa18.87■□□□□ 0.61
CPSF6-205ENST00000550075 HIST1H1EP10412 219 aaKnown RBP18.87■□□□□ 0.61
CPSF6-205ENST00000550075 HLA-DMBP28068 263 aa18.87■□□□□ 0.61
CPSF6-205ENST00000550075 HIST1H1AQ02539 215 aaPredicted RBP18.87■□□□□ 0.61
CPSF6-205ENST00000550075 OR8A1Q8NGG7 326 aa18.87■□□□□ 0.61
CPSF6-205ENST00000550075 FUT9Q9Y231 359 aa18.87■□□□□ 0.61
CPSF6-205ENST00000550075 FXYD7P58549 80 aa18.86■□□□□ 0.61
CPSF6-205ENST00000550075 PDE6HQ13956 83 aa18.86■□□□□ 0.61
CPSF6-205ENST00000550075 Q5BKY6 102 aa18.86■□□□□ 0.61
CPSF6-205ENST00000550075 MIR17HGQ75NE6 70 aa18.86■□□□□ 0.61
CPSF6-205ENST00000550075 SLC35B3Q9H1N7 401 aa18.86■□□□□ 0.61
CPSF6-205ENST00000550075 TIMM9Q9Y5J7 89 aa18.86■□□□□ 0.61
CPSF6-205ENST00000550075 RHOBP62745 196 aa18.85■□□□□ 0.61
CPSF6-205ENST00000550075 SAT2Q96F10 170 aaPredicted RBP18.85■□□□□ 0.61
CPSF6-205ENST00000550075 SLC25A2Q9BXI2 301 aa18.85■□□□□ 0.61
CPSF6-205ENST00000550075 PPP1R14DQ9NXH3 145 aa18.85■□□□□ 0.61
CPSF6-205ENST00000550075 ZNF586Q9NXT0 402 aa18.85■□□□□ 0.61
CPSF6-205ENST00000550075 TRBV19A0A075B6N1 114 aa18.84■□□□□ 0.61
CPSF6-205ENST00000550075 ACOT6Q3I5F7 207 aaPredicted RBP18.84■□□□□ 0.61
CPSF6-205ENST00000550075 Q8NAQ8 132 aa18.84■□□□□ 0.61
CPSF6-205ENST00000550075 TNFSF18Q9UNG2 199 aa18.84■□□□□ 0.61
CPSF6-205ENST00000550075 GOLT1BQ9Y3E0 138 aa18.84■□□□□ 0.61
CPSF6-205ENST00000550075 ZNF705DP0CH99 300 aaPredicted RBP18.83■□□□□ 0.6
CPSF6-205ENST00000550075 ZNF705BP0CI00 300 aaPredicted RBP18.83■□□□□ 0.6
CPSF6-205ENST00000550075 PYYP10082 97 aa18.83■□□□□ 0.6
CPSF6-205ENST00000550075 TAS2R45P59539 299 aa18.83■□□□□ 0.6
CPSF6-205ENST00000550075 AMTNQ6UX39 209 aa18.83■□□□□ 0.6
CPSF6-205ENST00000550075 OR10J6PQ8NGY7 276 aa18.83■□□□□ 0.6
CPSF6-205ENST00000550075 FAM167A-AS1Q96KT0 104 aa18.83■□□□□ 0.6
CPSF6-205ENST00000550075 OR51M1Q9H341 326 aa18.83■□□□□ 0.6
CPSF6-205ENST00000550075 X6R8D5 127 aa18.83■□□□□ 0.6
CPSF6-205ENST00000550075 IGHV4-28A0A0C4DH34 117 aa18.82■□□□□ 0.6
CPSF6-205ENST00000550075 CXorf65A6NEN9 183 aa18.82■□□□□ 0.6
CPSF6-205ENST00000550075 BOLA2-SMG1P6H3BVE0 249 aa18.82■□□□□ 0.6
CPSF6-205ENST00000550075 OR7C2O60412 319 aa18.82■□□□□ 0.6
CPSF6-205ENST00000550075 KHDC3LQ587J8 217 aa18.82■□□□□ 0.6
CPSF6-205ENST00000550075 MRPL53Q96EL3 112 aaKnown RBP18.82■□□□□ 0.6
CPSF6-205ENST00000550075 PAXXQ9BUH6 204 aa18.82■□□□□ 0.6
CPSF6-205ENST00000550075 AAMDCQ9H7C9 122 aa18.82■□□□□ 0.6
CPSF6-205ENST00000550075 PRELID1Q9Y255 219 aa18.82■□□□□ 0.6
CPSF6-205ENST00000550075 ZNF705AQ6ZN79 300 aaPredicted RBP18.81■□□□□ 0.6
CPSF6-205ENST00000550075 BLNKQ8WV28 456 aa18.81■□□□□ 0.6
CPSF6-205ENST00000550075 IGF2BP2-AS1Q96M15 143 aa18.81■□□□□ 0.6
CPSF6-205ENST00000550075 RNF222A6NCQ9 220 aa18.8■□□□□ 0.6
CPSF6-205ENST00000550075 INSP01308 110 aa18.8■□□□□ 0.6
CPSF6-205ENST00000550075 M6PRP20645 277 aa18.8■□□□□ 0.6
CPSF6-205ENST00000550075 PMS2P11Q13670 270 aa18.8■□□□□ 0.6
CPSF6-205ENST00000550075 HSD17B11Q8NBQ5 300 aa18.8■□□□□ 0.6
CPSF6-205ENST00000550075 NEU1Q99519 415 aa18.8■□□□□ 0.6
CPSF6-205ENST00000550075 IGHV3OR16-12A0A075B7B8 117 aa18.79■□□□□ 0.6
CPSF6-205ENST00000550075 BORCS7-ASMTA0A0B4J1R7 106 aa18.79■□□□□ 0.6
CPSF6-205ENST00000550075 SMIM9A6NGZ8 99 aa18.79■□□□□ 0.6
CPSF6-205ENST00000550075 ZNF705FA8MVS1 300 aaPredicted RBP18.79■□□□□ 0.6
CPSF6-205ENST00000550075 DEFB4AO15263 64 aa18.79■□□□□ 0.6
CPSF6-205ENST00000550075 NBEAP1P0C6P0 100 aa18.79■□□□□ 0.6
CPSF6-205ENST00000550075 SPINK13Q1W4C9 94 aa18.79■□□□□ 0.6
CPSF6-205ENST00000550075 C11orf45Q8TAV5 145 aa18.79■□□□□ 0.6
CPSF6-205ENST00000550075 PSMG3Q9BT73 122 aaPredicted RBP18.79■□□□□ 0.6
CPSF6-205ENST00000550075 A0A1W2PPV4 95 aa18.78■□□□□ 0.6
CPSF6-205ENST00000550075 M0R2Z0 102 aa18.78■□□□□ 0.6
CPSF6-205ENST00000550075 UBE2L3P68036 154 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms