RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 IGFL4Q6B9Z1 124 aa15.35■□□□□ 0.05
SCARB1-211ENST00000546215 OR10G4Q8NGN3 311 aa15.35■□□□□ 0.05
SCARB1-211ENST00000546215 OR10G9Q8NGN4 311 aa15.35■□□□□ 0.05
SCARB1-211ENST00000546215 OR10G7Q8NGN6 311 aa15.35■□□□□ 0.05
SCARB1-211ENST00000546215 NBEAL2Q6ZNJ1 2754 aa15.34■□□□□ 0.05
SCARB1-211ENST00000546215 PYYP10082 97 aa15.34■□□□□ 0.05
SCARB1-211ENST00000546215 HAGHQ16775 308 aa15.34■□□□□ 0.05
SCARB1-211ENST00000546215 LCN15Q6UWW0 184 aa15.34■□□□□ 0.05
SCARB1-211ENST00000546215 RPP25LQ8N5L8 163 aaKnown RBP15.34■□□□□ 0.05
SCARB1-211ENST00000546215 SAT2Q96F10 170 aaPredicted RBP15.34■□□□□ 0.05
SCARB1-211ENST00000546215 ZNF586Q9NXT0 402 aa15.34■□□□□ 0.05
SCARB1-211ENST00000546215 KNCNA6PVL3 124 aa15.33■□□□□ 0.05
SCARB1-211ENST00000546215 H3BTX0 84 aa15.33■□□□□ 0.05
SCARB1-211ENST00000546215 MBP02144 154 aa15.33■□□□□ 0.05
SCARB1-211ENST00000546215 SPP1P10451 314 aa15.33■□□□□ 0.05
SCARB1-211ENST00000546215 GUK1Q16774 197 aa15.33■□□□□ 0.05
SCARB1-211ENST00000546215 ZNF331Q9NQX6 463 aaPredicted RBP15.33■□□□□ 0.05
SCARB1-211ENST00000546215 PFDN1O60925 122 aa15.32■□□□□ 0.04
SCARB1-211ENST00000546215 EIF3GO75821 320 aaKnown RBP eCLIP15.32■□□□□ 0.04
SCARB1-211ENST00000546215 HIST1H1EP10412 219 aaKnown RBP15.32■□□□□ 0.04
SCARB1-211ENST00000546215 DEFB1P60022 68 aa15.32■□□□□ 0.04
SCARB1-211ENST00000546215 FAM122CQ6P4D5 195 aa15.32■□□□□ 0.04
SCARB1-211ENST00000546215 LRRC20Q8TCA0 184 aa15.32■□□□□ 0.04
SCARB1-211ENST00000546215 ZNF503Q96F45 646 aa15.32■□□□□ 0.04
SCARB1-211ENST00000546215 ZNF471Q9BX82 626 aaPredicted RBP15.32■□□□□ 0.04
SCARB1-211ENST00000546215 OR51M1Q9H341 326 aa15.32■□□□□ 0.04
SCARB1-211ENST00000546215 TRBV19A0A075B6N1 114 aa15.32■□□□□ 0.04
SCARB1-211ENST00000546215 A0A1W2PPV4 95 aa15.32■□□□□ 0.04
SCARB1-211ENST00000546215 SLC17A3O00476 420 aa15.32■□□□□ 0.04
SCARB1-211ENST00000546215 RPL35AP18077 110 aaKnown RBP15.32■□□□□ 0.04
SCARB1-211ENST00000546215 ACTL10Q5JWF8 245 aa15.32■□□□□ 0.04
SCARB1-211ENST00000546215 RNF182Q8N6D2 247 aa15.32■□□□□ 0.04
SCARB1-211ENST00000546215 SLC50A1Q9BRV3 221 aa15.32■□□□□ 0.04
SCARB1-211ENST00000546215 PAXXQ9BUH6 204 aa15.32■□□□□ 0.04
SCARB1-211ENST00000546215 RPRMQ9NS64 109 aa15.32■□□□□ 0.04
SCARB1-211ENST00000546215 HLA-DMBP28068 263 aa15.31■□□□□ 0.04
SCARB1-211ENST00000546215 TAS2R45P59539 299 aa15.31■□□□□ 0.04
SCARB1-211ENST00000546215 ZFP69Q49AA0 526 aa15.31■□□□□ 0.04
SCARB1-211ENST00000546215 TMEM41BQ5BJD5 291 aa15.31■□□□□ 0.04
SCARB1-211ENST00000546215 STHQ8IWL8 128 aa15.31■□□□□ 0.04
SCARB1-211ENST00000546215 FXYD5Q96DB9 178 aa15.31■□□□□ 0.04
SCARB1-211ENST00000546215 OR7C2O60412 319 aa15.3■□□□□ 0.04
SCARB1-211ENST00000546215 ZNF253O75346 499 aa15.3■□□□□ 0.04
SCARB1-211ENST00000546215 KHDC3LQ587J8 217 aa15.3■□□□□ 0.04
SCARB1-211ENST00000546215 GDF5OSQ5U4N7 250 aa15.3■□□□□ 0.04
SCARB1-211ENST00000546215 TRPT1Q86TN4 253 aaKnown RBP15.3■□□□□ 0.04
SCARB1-211ENST00000546215 RNF141Q8WVD5 230 aa15.3■□□□□ 0.04
SCARB1-211ENST00000546215 SAV1Q9H4B6 383 aaPredicted RBP15.3■□□□□ 0.04
SCARB1-211ENST00000546215 H3BMM0 161 aa15.29■□□□□ 0.04
SCARB1-211ENST00000546215 NDUFB4O95168 129 aa15.29■□□□□ 0.04
SCARB1-211ENST00000546215 OR10J4P0C629 311 aa15.29■□□□□ 0.04
SCARB1-211ENST00000546215 NBEAP1P0C6P0 100 aa15.29■□□□□ 0.04
SCARB1-211ENST00000546215 NHLRC4P0CG21 123 aaPredicted RBP15.29■□□□□ 0.04
SCARB1-211ENST00000546215 CDC34P49427 236 aaPredicted RBP15.29■□□□□ 0.04
SCARB1-211ENST00000546215 PDE6HQ13956 83 aa15.29■□□□□ 0.04
SCARB1-211ENST00000546215 PSG3Q16557 428 aa15.29■□□□□ 0.04
SCARB1-211ENST00000546215 FOXI2Q6ZQN5 318 aa15.29■□□□□ 0.04
SCARB1-211ENST00000546215 TM2D3Q9BRN9 247 aa15.29■□□□□ 0.04
SCARB1-211ENST00000546215 KIR2DL5BA0A0G2JN68 375 aa15.28■□□□□ 0.04
SCARB1-211ENST00000546215 KIR2DL5BA0A0G2JPC4 375 aa15.28■□□□□ 0.04
SCARB1-211ENST00000546215 HMGB3O15347 200 aaKnown RBP15.28■□□□□ 0.04
SCARB1-211ENST00000546215 HLA-DRB4P13762 266 aa15.28■□□□□ 0.04
SCARB1-211ENST00000546215 APOC4P55056 127 aa15.28■□□□□ 0.04
SCARB1-211ENST00000546215 KIR2DL5AQ8N109 375 aa15.28■□□□□ 0.04
SCARB1-211ENST00000546215 C9orf62Q8N4C0 152 aa15.28■□□□□ 0.04
SCARB1-211ENST00000546215 KIR2DL5BQ8NHK3 375 aa15.28■□□□□ 0.04
SCARB1-211ENST00000546215 BLNKQ8WV28 456 aa15.28■□□□□ 0.04
SCARB1-211ENST00000546215 RAB24Q969Q5 203 aa15.28■□□□□ 0.04
SCARB1-211ENST00000546215 HLA-DRB4X5D2U9 266 aa15.28■□□□□ 0.04
SCARB1-211ENST00000546215 F6UB75 175 aa15.28■□□□□ 0.04
SCARB1-211ENST00000546215 SEC11BP0C7V7 166 aa15.28■□□□□ 0.04
SCARB1-211ENST00000546215 EIF5AP63241 154 aaKnown RBP15.28■□□□□ 0.04
SCARB1-211ENST00000546215 PQLC2Q6ZP29 291 aa15.28■□□□□ 0.04
SCARB1-211ENST00000546215 BAP18Q8IXM2 172 aa15.28■□□□□ 0.04
SCARB1-211ENST00000546215 STOML3Q8TAV4 291 aa15.28■□□□□ 0.04
SCARB1-211ENST00000546215 A0A0J9YX75 114 aa15.27■□□□□ 0.03
SCARB1-211ENST00000546215 STAG3L2P0CL84 134 aa15.27■□□□□ 0.03
SCARB1-211ENST00000546215 STAG3L3P0CL85 134 aa15.27■□□□□ 0.03
SCARB1-211ENST00000546215 TPT1P13693 172 aaKnown RBP15.27■□□□□ 0.03
SCARB1-211ENST00000546215 AKR1C8PQ5T2L2 129 aa15.27■□□□□ 0.03
SCARB1-211ENST00000546215 ZNF738Q8NE65 137 aa15.27■□□□□ 0.03
SCARB1-211ENST00000546215 ACTR3CQ9C0K3 210 aaPredicted RBP15.27■□□□□ 0.03
SCARB1-211ENST00000546215 CSTL1Q9H114 145 aa15.27■□□□□ 0.03
SCARB1-211ENST00000546215 CLEC5AQ9NY25 188 aa15.27■□□□□ 0.03
SCARB1-211ENST00000546215 PLA2G2EQ9NZK7 142 aa15.27■□□□□ 0.03
SCARB1-211ENST00000546215 UBE2L3P68036 154 aaKnown RBP15.26■□□□□ 0.03
SCARB1-211ENST00000546215 EBLN2Q6P2I7 272 aa15.26■□□□□ 0.03
SCARB1-211ENST00000546215 SSX7Q7RTT5 188 aa15.26■□□□□ 0.03
SCARB1-211ENST00000546215 TENM3Q9P273 2699 aa15.25■□□□□ 0.03
SCARB1-211ENST00000546215 PSG9Q00887 426 aa15.25■□□□□ 0.03
SCARB1-211ENST00000546215 ZNF726P1Q15940 193 aa15.25■□□□□ 0.03
SCARB1-211ENST00000546215 ZNF705FA8MVS1 300 aaPredicted RBP15.24■□□□□ 0.03
SCARB1-211ENST00000546215 UBE2CO00762 179 aa15.24■□□□□ 0.03
SCARB1-211ENST00000546215 ARL14EPLP0DKL9 152 aa15.24■□□□□ 0.03
SCARB1-211ENST00000546215 RPUSD4Q96CM3 377 aaKnown RBP15.24■□□□□ 0.03
SCARB1-211ENST00000546215 PHYHIPLQ96FC7 376 aa15.24■□□□□ 0.03
SCARB1-211ENST00000546215 GIG44P09565 113 aaPredicted RBP15.24■□□□□ 0.03
SCARB1-211ENST00000546215 PRB4P10163 310 aaPredicted RBP15.24■□□□□ 0.03
SCARB1-211ENST00000546215 NKX2-5P52952 324 aaPredicted RBP15.24■□□□□ 0.03
SCARB1-211ENST00000546215 SLC51BQ86UW2 128 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms