RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 NHLRC4P0CG21 123 aaPredicted RBP15.1■□□□□ 0.01
HMGA2-211ENST00000545998 PYYP10082 97 aa15.1■□□□□ 0.01
HMGA2-211ENST00000545998 RPL35AP18077 110 aaKnown RBP15.1■□□□□ 0.01
HMGA2-211ENST00000545998 IGFL4Q6B9Z1 124 aa15.1■□□□□ 0.01
HMGA2-211ENST00000545998 LCN15Q6UWW0 184 aa15.1■□□□□ 0.01
HMGA2-211ENST00000545998 STAB2Q8WWQ8 2551 aa15.1■□□□□ 0.01
HMGA2-211ENST00000545998 H3BTX0 84 aa15.09■□□□□ 0.01
HMGA2-211ENST00000545998 BCL2L11O43521 198 aa15.09■□□□□ 0.01
HMGA2-211ENST00000545998 GUK1Q16774 197 aa15.09■□□□□ 0.01
HMGA2-211ENST00000545998 ACTL10Q5JWF8 245 aa15.09■□□□□ 0.01
HMGA2-211ENST00000545998 TMUB2Q71RG4 321 aa15.09■□□□□ 0.01
HMGA2-211ENST00000545998 STHQ8IWL8 128 aa15.09■□□□□ 0.01
HMGA2-211ENST00000545998 RNF182Q8N6D2 247 aa15.09■□□□□ 0.01
HMGA2-211ENST00000545998 OR10G4Q8NGN3 311 aa15.09■□□□□ 0.01
HMGA2-211ENST00000545998 OR10G9Q8NGN4 311 aa15.09■□□□□ 0.01
HMGA2-211ENST00000545998 OR10G7Q8NGN6 311 aa15.09■□□□□ 0.01
HMGA2-211ENST00000545998 SAT2Q96F10 170 aaPredicted RBP15.09■□□□□ 0.01
HMGA2-211ENST00000545998 TM2D3Q9BRN9 247 aa15.09■□□□□ 0.01
HMGA2-211ENST00000545998 ZNF331Q9NQX6 463 aaPredicted RBP15.09■□□□□ 0.01
HMGA2-211ENST00000545998 ZNF586Q9NXT0 402 aa15.09■□□□□ 0.01
HMGA2-211ENST00000545998 KANTRA0A1W2PQU2 76 aa15.08■□□□□ 0
HMGA2-211ENST00000545998 SLC17A3O00476 420 aa15.08■□□□□ 0
HMGA2-211ENST00000545998 HIST1H1EP10412 219 aaKnown RBP15.08■□□□□ 0
HMGA2-211ENST00000545998 DEFB1P60022 68 aa15.08■□□□□ 0
HMGA2-211ENST00000545998 TRPT1Q86TN4 253 aaKnown RBP15.08■□□□□ 0
HMGA2-211ENST00000545998 LRRC20Q8TCA0 184 aa15.08■□□□□ 0
HMGA2-211ENST00000545998 HYLS1Q96M11 299 aa15.08■□□□□ 0
HMGA2-211ENST00000545998 SLC50A1Q9BRV3 221 aa15.08■□□□□ 0
HMGA2-211ENST00000545998 KIR2DL5BA0A0G2JN68 375 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 KIR2DL5BA0A0G2JPC4 375 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 MBP02144 154 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 APOC4P55056 127 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 LGALSLQ3ZCW2 172 aaPredicted RBP15.07■□□□□ 0
HMGA2-211ENST00000545998 KIR2DL5AQ8N109 375 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 KIR2DL5BQ8NHK3 375 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 ZNF503Q96F45 646 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 PAXXQ9BUH6 204 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 OR51M1Q9H341 326 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 SAV1Q9H4B6 383 aaPredicted RBP15.07■□□□□ 0
HMGA2-211ENST00000545998 RPRMQ9NS64 109 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 TRBV19A0A075B6N1 114 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 ZNF253O75346 499 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 HLA-DRB4P13762 266 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 HLA-DMBP28068 263 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 TAS2R45P59539 299 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 GDF5OSQ5U4N7 250 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 FAM122CQ6P4D5 195 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 FOXI2Q6ZQN5 318 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 RPP25LQ8N5L8 163 aaKnown RBP15.07■□□□□ 0
HMGA2-211ENST00000545998 HLA-DRB4X5D2U9 266 aa15.07■□□□□ 0
HMGA2-211ENST00000545998 A0A1W2PPV4 95 aa15.06■□□□□ 0
HMGA2-211ENST00000545998 H3BMM0 161 aa15.06■□□□□ 0
HMGA2-211ENST00000545998 EIF3GO75821 320 aaKnown RBP eCLIP15.06■□□□□ 0
HMGA2-211ENST00000545998 SPP1P10451 314 aa15.06■□□□□ 0
HMGA2-211ENST00000545998 KHDC3LQ587J8 217 aa15.06■□□□□ 0
HMGA2-211ENST00000545998 FXYD5Q96DB9 178 aa15.06■□□□□ 0
HMGA2-211ENST00000545998 ZNF471Q9BX82 626 aaPredicted RBP15.06■□□□□ 0
HMGA2-211ENST00000545998 OR7C2O60412 319 aa15.05■□□□□ -0
HMGA2-211ENST00000545998 PFDN1O60925 122 aa15.05■□□□□ -0
HMGA2-211ENST00000545998 PDE6HQ13956 83 aa15.05■□□□□ -0
HMGA2-211ENST00000545998 PSG3Q16557 428 aa15.05■□□□□ -0
HMGA2-211ENST00000545998 TMEM41BQ5BJD5 291 aa15.05■□□□□ -0
HMGA2-211ENST00000545998 RNF141Q8WVD5 230 aa15.05■□□□□ -0
HMGA2-211ENST00000545998 CSTL1Q9H114 145 aa15.05■□□□□ -0
HMGA2-211ENST00000545998 F6UB75 175 aa15.04■□□□□ -0
HMGA2-211ENST00000545998 NDUFB4O95168 129 aa15.04■□□□□ -0
HMGA2-211ENST00000545998 OR10J4P0C629 311 aa15.04■□□□□ -0
HMGA2-211ENST00000545998 CDC34P49427 236 aaPredicted RBP15.04■□□□□ -0
HMGA2-211ENST00000545998 ZMAT4Q9H898 229 aa15.04■□□□□ -0
HMGA2-211ENST00000545998 A0A0J9YX75 114 aa15.03■□□□□ -0
HMGA2-211ENST00000545998 UBE2CO00762 179 aa15.03■□□□□ -0
HMGA2-211ENST00000545998 NBEAP1P0C6P0 100 aa15.03■□□□□ -0
HMGA2-211ENST00000545998 ZFP69Q49AA0 526 aa15.03■□□□□ -0
HMGA2-211ENST00000545998 EBLN2Q6P2I7 272 aa15.03■□□□□ -0
HMGA2-211ENST00000545998 ZNF738Q8NE65 137 aa15.03■□□□□ -0
HMGA2-211ENST00000545998 BLNKQ8WV28 456 aa15.03■□□□□ -0
HMGA2-211ENST00000545998 SPATA25Q9BR10 227 aa15.03■□□□□ -0
HMGA2-211ENST00000545998 PQLC2Q6ZP29 291 aa15.02■□□□□ -0
HMGA2-211ENST00000545998 RAB24Q969Q5 203 aa15.02■□□□□ -0
HMGA2-211ENST00000545998 CLEC5AQ9NY25 188 aa15.02■□□□□ -0
HMGA2-211ENST00000545998 DNAH7Q8WXX0 4024 aa15.02■□□□□ -0
HMGA2-211ENST00000545998 HMGB3O15347 200 aaKnown RBP15.02□□□□□ -0.01
HMGA2-211ENST00000545998 UBE2L3P68036 154 aaKnown RBP15.02□□□□□ -0.01
HMGA2-211ENST00000545998 CLUHP3Q96NS8 147 aa15.02□□□□□ -0.01
HMGA2-211ENST00000545998 RETNQ9HD89 108 aa15.02□□□□□ -0.01
HMGA2-211ENST00000545998 GIG44P09565 113 aaPredicted RBP15.01□□□□□ -0.01
HMGA2-211ENST00000545998 SEC11BP0C7V7 166 aa15.01□□□□□ -0.01
HMGA2-211ENST00000545998 STAG3L2P0CL84 134 aa15.01□□□□□ -0.01
HMGA2-211ENST00000545998 STAG3L3P0CL85 134 aa15.01□□□□□ -0.01
HMGA2-211ENST00000545998 EIF5AP63241 154 aaKnown RBP15.01□□□□□ -0.01
HMGA2-211ENST00000545998 PSG9Q00887 426 aa15.01□□□□□ -0.01
HMGA2-211ENST00000545998 AKR1C8PQ5T2L2 129 aa15.01□□□□□ -0.01
HMGA2-211ENST00000545998 MORN3Q6PF18 240 aaPredicted RBP15.01□□□□□ -0.01
HMGA2-211ENST00000545998 Q6ZWC4 215 aa15.01□□□□□ -0.01
HMGA2-211ENST00000545998 BAP18Q8IXM2 172 aa15.01□□□□□ -0.01
HMGA2-211ENST00000545998 C9orf62Q8N4C0 152 aa15.01□□□□□ -0.01
HMGA2-211ENST00000545998 STOML3Q8TAV4 291 aa15.01□□□□□ -0.01
HMGA2-211ENST00000545998 RPUSD4Q96CM3 377 aaKnown RBP15.01□□□□□ -0.01
HMGA2-211ENST00000545998 ACTR3CQ9C0K3 210 aaPredicted RBP15.01□□□□□ -0.01
HMGA2-211ENST00000545998 ZNF705FA8MVS1 300 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms