RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 RIGQ13278 110 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 CDSNQ15517 529 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 C5orf64Q2M2E5 130 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 FAM19A2Q8N3H0 131 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 ZNF491Q8N8L2 437 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 THYN1Q9P016 225 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 MALRD1Q5VYJ5 2156 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 TRAV9-2A0A087WT02 112 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 FAM90A27PA6NNH2 459 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 CRXO43186 299 aaPredicted RBP18.35■□□□□ 0.53
FOXA1-202ENST00000545425 HLA-DRB1P01911 266 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 MINOS1Q5TGZ0 78 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 LEMD1Q68G75 181 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 GOLT1AQ6ZVE7 132 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 PGLYRP4Q96LB8 373 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 MINOS1-NBL1R4GNA1 71 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 LOC105371242A0A075B767 164 aa18.34■□□□□ 0.53
FOXA1-202ENST00000545425 LOC102724200A0A096LPH7 203 aaPredicted RBP18.34■□□□□ 0.53
FOXA1-202ENST00000545425 APELAP0DMC3 54 aa18.34■□□□□ 0.53
FOXA1-202ENST00000545425 ZNF562Q6V9R5 426 aa18.34■□□□□ 0.53
FOXA1-202ENST00000545425 SIGLEC15Q6ZMC9 328 aa18.34■□□□□ 0.53
FOXA1-202ENST00000545425 SIAH2O43255 324 aa18.33■□□□□ 0.53
FOXA1-202ENST00000545425 PSG3Q16557 428 aa18.33■□□□□ 0.53
FOXA1-202ENST00000545425 TMEM70Q9BUB7 260 aa18.33■□□□□ 0.53
FOXA1-202ENST00000545425 SSBP4Q9BWG4 385 aaPredicted RBP18.33■□□□□ 0.53
FOXA1-202ENST00000545425 GSX1Q9H4S2 264 aaPredicted RBP18.33■□□□□ 0.53
FOXA1-202ENST00000545425 MRPS16Q9Y3D3 137 aaKnown RBP18.33■□□□□ 0.53
FOXA1-202ENST00000545425 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.33■□□□□ 0.52
FOXA1-202ENST00000545425 COX6B1P14854 86 aa18.33■□□□□ 0.52
FOXA1-202ENST00000545425 PSG9Q00887 426 aa18.33■□□□□ 0.52
FOXA1-202ENST00000545425 PRNTQ86SH4 94 aa18.33■□□□□ 0.52
FOXA1-202ENST00000545425 CIARTQ8N365 385 aaPredicted RBP18.33■□□□□ 0.52
FOXA1-202ENST00000545425 TTC9CQ8N5M4 171 aa18.33■□□□□ 0.52
FOXA1-202ENST00000545425 IGLV11-55A0A075B6I3 123 aa18.32■□□□□ 0.52
FOXA1-202ENST00000545425 A0A1B0GUT8 65 aa18.32■□□□□ 0.52
FOXA1-202ENST00000545425 C2orf70A6NJV1 201 aa18.32■□□□□ 0.52
FOXA1-202ENST00000545425 MRPS12O15235 138 aaKnown RBP18.32■□□□□ 0.52
FOXA1-202ENST00000545425 EBI3Q14213 229 aa18.32■□□□□ 0.52
FOXA1-202ENST00000545425 TXN2Q99757 166 aa18.32■□□□□ 0.52
FOXA1-202ENST00000545425 AAMDCQ9H7C9 122 aa18.32■□□□□ 0.52
FOXA1-202ENST00000545425 PSG8Q9UQ74 426 aa18.32■□□□□ 0.52
FOXA1-202ENST00000545425 GNG7O60262 68 aa18.31■□□□□ 0.52
FOXA1-202ENST00000545425 APOHP02749 345 aaPredicted RBP18.31■□□□□ 0.52
FOXA1-202ENST00000545425 HNRNPA3P51991 378 aaKnown RBP18.31■□□□□ 0.52
FOXA1-202ENST00000545425 C11orf71Q6IPW1 123 aa18.31■□□□□ 0.52
FOXA1-202ENST00000545425 COX8CQ7Z4L0 72 aa18.31■□□□□ 0.52
FOXA1-202ENST00000545425 ZNF414Q96IQ9 312 aa18.31■□□□□ 0.52
FOXA1-202ENST00000545425 SGK494Q96LW2 274 aa18.31■□□□□ 0.52
FOXA1-202ENST00000545425 FCGR2BP31994 310 aaPredicted RBP18.3■□□□□ 0.52
FOXA1-202ENST00000545425 EXOC3-AS1Q8N2X6 119 aa18.3■□□□□ 0.52
FOXA1-202ENST00000545425 SPOCK3Q9BQ16 436 aa18.3■□□□□ 0.52
FOXA1-202ENST00000545425 NBPF19A0A087WUL8 3843 aa18.3■□□□□ 0.52
FOXA1-202ENST00000545425 IL4P05112 153 aa18.3■□□□□ 0.52
FOXA1-202ENST00000545425 CSN1S1P47710 185 aa18.3■□□□□ 0.52
FOXA1-202ENST00000545425 ARPC1AQ92747 370 aa18.3■□□□□ 0.52
FOXA1-202ENST00000545425 C19orf84I3L1E1 186 aa18.29■□□□□ 0.52
FOXA1-202ENST00000545425 LINC00614P0C842 121 aa18.29■□□□□ 0.52
FOXA1-202ENST00000545425 DLX1P56177 255 aa18.29■□□□□ 0.52
FOXA1-202ENST00000545425 EBLN2Q6P2I7 272 aa18.29■□□□□ 0.52
FOXA1-202ENST00000545425 CT45A10P0DMU9 189 aa18.28■□□□□ 0.52
FOXA1-202ENST00000545425 ARF6P62330 175 aa18.28■□□□□ 0.52
FOXA1-202ENST00000545425 LDLRAD2Q5SZI1 272 aa18.28■□□□□ 0.52
FOXA1-202ENST00000545425 Q6ZN92 141 aa18.28■□□□□ 0.52
FOXA1-202ENST00000545425 CELSR2Q9HCU4 2923 aa18.28■□□□□ 0.52
FOXA1-202ENST00000545425 SH2D7A6NKC9 451 aaPredicted RBP18.28■□□□□ 0.52
FOXA1-202ENST00000545425 H3BTX0 84 aa18.28■□□□□ 0.52
FOXA1-202ENST00000545425 RPL7P18124 248 aaKnown RBP18.28■□□□□ 0.52
FOXA1-202ENST00000545425 Q8N6K4 173 aa18.28■□□□□ 0.52
FOXA1-202ENST00000545425 URB1-AS1Q96HZ7 61 aa18.28■□□□□ 0.52
FOXA1-202ENST00000545425 FANCD2OSQ96PS1 177 aa18.27■□□□□ 0.52
FOXA1-202ENST00000545425 ST20Q9HBF5 79 aa18.27■□□□□ 0.52
FOXA1-202ENST00000545425 HSPB8Q9UJY1 196 aa18.27■□□□□ 0.52
FOXA1-202ENST00000545425 CRYBG3Q68DQ2 2970 aa18.27■□□□□ 0.51
FOXA1-202ENST00000545425 DLEU1O43261 78 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 ZNF124Q15973 351 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 KLK9Q2XQG4 91 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 SAPCD1Q5SSQ6 148 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 DTX2Q86UW9 622 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 ZC2HC1AQ96GY0 325 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 LPAR2Q9HBW0 351 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 C21orf62Q9NYP8 219 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 KLK9Q9UKQ9 250 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 LAMTOR2Q9Y2Q5 125 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 HILPDAQ9Y5L2 63 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 ITPR2Q14571 2701 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 TRAV8-1A0A0A6YYK1 113 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 A6NNC1 897 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 LEPROTL1O95214 131 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 ZNF25P17030 456 aaPredicted RBP18.26■□□□□ 0.51
FOXA1-202ENST00000545425 FAM120AOSQ5T036 256 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 ASPHD1Q5U4P2 390 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 PET117Q6UWS5 81 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 LHFPL4Q7Z7J7 247 aa18.26■□□□□ 0.51
FOXA1-202ENST00000545425 RAB9AP51151 201 aa18.25■□□□□ 0.51
FOXA1-202ENST00000545425 RPS20P60866 119 aaKnown RBP18.25■□□□□ 0.51
FOXA1-202ENST00000545425 HES1Q14469 280 aa18.25■□□□□ 0.51
FOXA1-202ENST00000545425 ZNF493Q6ZR52 646 aa18.25■□□□□ 0.51
FOXA1-202ENST00000545425 TMEM191AQ9H0A3 160 aa18.25■□□□□ 0.51
FOXA1-202ENST00000545425 PLXNB1O43157 2135 aa18.25■□□□□ 0.51
FOXA1-202ENST00000545425 IGHV1-24A0A0C4DH33 117 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms