RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 TRAV6A0A075B6T7 132 aa9.54□□□□□ -0.88
CAPN1-228ENST00000534373 C5orf51A6NDU8 294 aa9.54□□□□□ -0.88
CAPN1-228ENST00000534373 MRPS12O15235 138 aaKnown RBP9.54□□□□□ -0.88
CAPN1-228ENST00000534373 CRXO43186 299 aaPredicted RBP9.54□□□□□ -0.88
CAPN1-228ENST00000534373 UPK1BO75841 260 aa9.54□□□□□ -0.88
CAPN1-228ENST00000534373 INSP01308 110 aa9.54□□□□□ -0.88
CAPN1-228ENST00000534373 PVALBP20472 110 aaPredicted RBP9.54□□□□□ -0.88
CAPN1-228ENST00000534373 TSPOP30536 169 aa9.54□□□□□ -0.88
CAPN1-228ENST00000534373 SPINK13Q1W4C9 94 aa9.54□□□□□ -0.88
CAPN1-228ENST00000534373 IGFL4Q6B9Z1 124 aa9.54□□□□□ -0.88
CAPN1-228ENST00000534373 MZT2BQ6NZ67 158 aa9.54□□□□□ -0.88
CAPN1-228ENST00000534373 LCN15Q6UWW0 184 aa9.54□□□□□ -0.88
CAPN1-228ENST00000534373 LINC00305Q7Z4B0 112 aa9.54□□□□□ -0.88
CAPN1-228ENST00000534373 BPIFA4PQ86YQ2 179 aa9.54□□□□□ -0.88
CAPN1-228ENST00000534373 C12orf45Q8N5I9 185 aaPredicted RBP9.54□□□□□ -0.88
CAPN1-228ENST00000534373 OR8A1Q8NGG7 326 aa9.54□□□□□ -0.88
CAPN1-228ENST00000534373 SLC50A1Q9BRV3 221 aa9.54□□□□□ -0.88
CAPN1-228ENST00000534373 DNAH6Q9C0G6 4158 aa9.53□□□□□ -0.88
CAPN1-228ENST00000534373 FAM240BA0A1B0GVZ2 78 aa9.53□□□□□ -0.88
CAPN1-228ENST00000534373 LYRM9A8MSI8 78 aa9.53□□□□□ -0.88
CAPN1-228ENST00000534373 FAM25EA8MYX2 175 aa9.53□□□□□ -0.88
CAPN1-228ENST00000534373 BOLA2-SMG1P6H3BVE0 249 aa9.53□□□□□ -0.88
CAPN1-228ENST00000534373 CCSO14618 274 aa9.53□□□□□ -0.88
CAPN1-228ENST00000534373 H2AFB2P0C5Z0 115 aa9.53□□□□□ -0.88
CAPN1-228ENST00000534373 BCAP31P51572 246 aa9.53□□□□□ -0.88
CAPN1-228ENST00000534373 Q6ZRG5 221 aa9.53□□□□□ -0.88
CAPN1-228ENST00000534373 TMEM256Q8N2U0 113 aa9.53□□□□□ -0.88
CAPN1-228ENST00000534373 MGST2Q99735 147 aa9.53□□□□□ -0.88
CAPN1-228ENST00000534373 C11orf1Q9H5F2 150 aa9.53□□□□□ -0.88
CAPN1-228ENST00000534373 DNAJC4Q9NNZ3 241 aa9.53□□□□□ -0.88
CAPN1-228ENST00000534373 ZNF331Q9NQX6 463 aaPredicted RBP9.53□□□□□ -0.88
CAPN1-228ENST00000534373 LSM5Q9Y4Y9 91 aaKnown RBP9.53□□□□□ -0.88
CAPN1-228ENST00000534373 M0R2Z0 102 aa9.52□□□□□ -0.89
CAPN1-228ENST00000534373 COX7A2P2O60397 106 aa9.52□□□□□ -0.89
CAPN1-228ENST00000534373 S100A11P31949 105 aa9.52□□□□□ -0.89
CAPN1-228ENST00000534373 CAMLGP49069 296 aa9.52□□□□□ -0.89
CAPN1-228ENST00000534373 CAV2P51636 162 aa9.52□□□□□ -0.89
CAPN1-228ENST00000534373 DAD1P61803 113 aa9.52□□□□□ -0.89
CAPN1-228ENST00000534373 RHOBP62745 196 aa9.52□□□□□ -0.89
CAPN1-228ENST00000534373 IL15RAQ13261 267 aa9.52□□□□□ -0.89
CAPN1-228ENST00000534373 ASAH1Q13510 395 aa9.52□□□□□ -0.89
CAPN1-228ENST00000534373 C10orf113Q5VZT2 155 aa9.52□□□□□ -0.89
CAPN1-228ENST00000534373 LINC00336Q6ZUF6 198 aa9.52□□□□□ -0.89
CAPN1-228ENST00000534373 ENKURQ8TC29 256 aa9.52□□□□□ -0.89
CAPN1-228ENST00000534373 CHAC2Q8WUX2 184 aa9.52□□□□□ -0.89
CAPN1-228ENST00000534373 TMEM37Q8WXS4 190 aa9.52□□□□□ -0.89
CAPN1-228ENST00000534373 RPUSD4Q96CM3 377 aaKnown RBP9.52□□□□□ -0.89
CAPN1-228ENST00000534373 SEC22CQ9BRL7 303 aa9.52□□□□□ -0.89
CAPN1-228ENST00000534373 PPP1R14DQ9NXH3 145 aa9.52□□□□□ -0.89
CAPN1-228ENST00000534373 SULT1A1P50225 295 aa9.51□□□□□ -0.89
CAPN1-228ENST00000534373 HIST1H1AQ02539 215 aaPredicted RBP9.51□□□□□ -0.89
CAPN1-228ENST00000534373 GUK1Q16774 197 aa9.51□□□□□ -0.89
CAPN1-228ENST00000534373 VWC2Q2TAL6 325 aa9.51□□□□□ -0.89
CAPN1-228ENST00000534373 NRARPQ7Z6K4 114 aa9.51□□□□□ -0.89
CAPN1-228ENST00000534373 OR1L4Q8NGR5 311 aa9.51□□□□□ -0.89
CAPN1-228ENST00000534373 LYRM2Q9NU23 88 aaPredicted RBP9.51□□□□□ -0.89
CAPN1-228ENST00000534373 UQCC1Q9NVA1 299 aa9.51□□□□□ -0.89
CAPN1-228ENST00000534373 PLA2G2EQ9NZK7 142 aa9.51□□□□□ -0.89
CAPN1-228ENST00000534373 WDR83OSQ9Y284 106 aa9.51□□□□□ -0.89
CAPN1-228ENST00000534373 PXMP4Q9Y6I8 212 aa9.51□□□□□ -0.89
CAPN1-228ENST00000534373 FAM24AA6NFZ4 105 aa9.5□□□□□ -0.89
CAPN1-228ENST00000534373 ZNF705GA8MUZ8 300 aaPredicted RBP9.5□□□□□ -0.89
CAPN1-228ENST00000534373 CST7O76096 145 aa9.5□□□□□ -0.89
CAPN1-228ENST00000534373 CDKN1BP46527 198 aa9.5□□□□□ -0.89
CAPN1-228ENST00000534373 RPL29P47914 159 aaKnown RBP9.5□□□□□ -0.89
CAPN1-228ENST00000534373 TAS2R60P59551 318 aa9.5□□□□□ -0.89
CAPN1-228ENST00000534373 HBG1P69891 147 aa9.5□□□□□ -0.89
CAPN1-228ENST00000534373 HBG2P69892 147 aa9.5□□□□□ -0.89
CAPN1-228ENST00000534373 IFITM3Q01628 133 aa9.5□□□□□ -0.89
CAPN1-228ENST00000534373 ATP6V1FQ16864 119 aa9.5□□□□□ -0.89
CAPN1-228ENST00000534373 RNF212Q495C1 297 aa9.5□□□□□ -0.89
CAPN1-228ENST00000534373 STX12Q86Y82 276 aa9.5□□□□□ -0.89
CAPN1-228ENST00000534373 BAP18Q8IXM2 172 aa9.5□□□□□ -0.89
CAPN1-228ENST00000534373 LINC01587Q99440 93 aa9.5□□□□□ -0.89
CAPN1-228ENST00000534373 PFDN5Q99471 154 aa9.5□□□□□ -0.89
CAPN1-228ENST00000534373 C20orf144Q9BQM9 153 aa9.5□□□□□ -0.89
CAPN1-228ENST00000534373 TRAV12-2A0A075B6T6 113 aa9.49□□□□□ -0.89
CAPN1-228ENST00000534373 IGLC2P0DOY2 106 aa9.49□□□□□ -0.89
CAPN1-228ENST00000534373 OPCMLQ14982 345 aa9.49□□□□□ -0.89
CAPN1-228ENST00000534373 LGALS9BQ3B8N2 356 aa9.49□□□□□ -0.89
CAPN1-228ENST00000534373 ZNF493Q6ZR52 646 aa9.49□□□□□ -0.89
CAPN1-228ENST00000534373 TMEM252Q8N6L7 170 aa9.49□□□□□ -0.89
CAPN1-228ENST00000534373 C15orf53Q8NAA6 179 aa9.49□□□□□ -0.89
CAPN1-228ENST00000534373 SAT2Q96F10 170 aaPredicted RBP9.49□□□□□ -0.89
CAPN1-228ENST00000534373 ZNF253O75346 499 aa9.48□□□□□ -0.89
CAPN1-228ENST00000534373 MPDU1O75352 247 aa9.48□□□□□ -0.89
CAPN1-228ENST00000534373 HTN3P15516 51 aa9.48□□□□□ -0.89
CAPN1-228ENST00000534373 DEFA1P59665 94 aa9.48□□□□□ -0.89
CAPN1-228ENST00000534373 DEFA3P59666 94 aa9.48□□□□□ -0.89
CAPN1-228ENST00000534373 S100A10P60903 97 aa9.48□□□□□ -0.89
CAPN1-228ENST00000534373 RAB32Q13637 225 aa9.48□□□□□ -0.89
CAPN1-228ENST00000534373 MORN5Q5VZ52 161 aa9.48□□□□□ -0.89
CAPN1-228ENST00000534373 MIC13Q5XKP0 118 aa9.48□□□□□ -0.89
CAPN1-228ENST00000534373 OR10J6PQ8NGY7 276 aa9.48□□□□□ -0.89
CAPN1-228ENST00000534373 GPN1Q9HCN4 374 aaPredicted RBP9.48□□□□□ -0.89
CAPN1-228ENST00000534373 PLAC8L1A1L4L8 177 aa9.47□□□□□ -0.89
CAPN1-228ENST00000534373 CBY3A6NI87 242 aa9.47□□□□□ -0.89
CAPN1-228ENST00000534373 H7BYZ3 331 aa9.47□□□□□ -0.89
CAPN1-228ENST00000534373 AZU1P20160 251 aa9.47□□□□□ -0.89
CAPN1-228ENST00000534373 FAM3BP58499 235 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms