RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 RNF212Q495C1 297 aa12.61□□□□□ -0.39
PCF11-206ENST00000533018 OR8A1Q8NGG7 326 aa12.61□□□□□ -0.39
PCF11-206ENST00000533018 RNF24Q9Y225 148 aa12.61□□□□□ -0.39
PCF11-206ENST00000533018 NACAE9PAV3 2078 aa12.6□□□□□ -0.39
PCF11-206ENST00000533018 A0A1B0GVY2 172 aa12.6□□□□□ -0.39
PCF11-206ENST00000533018 ZNF701M0R085 212 aaPredicted RBP12.6□□□□□ -0.39
PCF11-206ENST00000533018 TSC22D2O75157 780 aa12.6□□□□□ -0.39
PCF11-206ENST00000533018 SOHLH1Q5JUK2 328 aa12.6□□□□□ -0.39
PCF11-206ENST00000533018 ZBTB8BQ8NAP8 495 aaPredicted RBP12.6□□□□□ -0.39
PCF11-206ENST00000533018 ATG101Q9BSB4 218 aa12.6□□□□□ -0.39
PCF11-206ENST00000533018 A0A087X0K7 114 aa12.59□□□□□ -0.39
PCF11-206ENST00000533018 FNDC10F2Z333 226 aa12.59□□□□□ -0.39
PCF11-206ENST00000533018 SNRPCP09234 159 aaKnown RBP12.59□□□□□ -0.39
PCF11-206ENST00000533018 AZU1P20160 251 aa12.59□□□□□ -0.39
PCF11-206ENST00000533018 TAS2R30P59541 319 aa12.59□□□□□ -0.39
PCF11-206ENST00000533018 FCN2Q15485 313 aa12.59□□□□□ -0.39
PCF11-206ENST00000533018 PATE2Q6UY27 113 aa12.59□□□□□ -0.39
PCF11-206ENST00000533018 LINC00305Q7Z4B0 112 aa12.59□□□□□ -0.39
PCF11-206ENST00000533018 ZNF546Q86UE3 836 aa12.59□□□□□ -0.39
PCF11-206ENST00000533018 C15orf53Q8NAA6 179 aa12.59□□□□□ -0.39
PCF11-206ENST00000533018 RPUSD4Q96CM3 377 aaKnown RBP12.59□□□□□ -0.39
PCF11-206ENST00000533018 F5H768 121 aa12.58□□□□□ -0.4
PCF11-206ENST00000533018 L7N2F9 121 aa12.58□□□□□ -0.4
PCF11-206ENST00000533018 AGPAT2O15120 278 aa12.58□□□□□ -0.4
PCF11-206ENST00000533018 BTCP35070 178 aa12.58□□□□□ -0.4
PCF11-206ENST00000533018 VAMP2P63027 116 aa12.58□□□□□ -0.4
PCF11-206ENST00000533018 PXDC1Q5TGL8 231 aa12.58□□□□□ -0.4
PCF11-206ENST00000533018 TMEM256Q8N2U0 113 aa12.58□□□□□ -0.4
PCF11-206ENST00000533018 MITD1Q8WV92 249 aa12.58□□□□□ -0.4
PCF11-206ENST00000533018 SDHCQ99643 169 aaPredicted RBP12.58□□□□□ -0.4
PCF11-206ENST00000533018 RCL1Q9Y2P8 373 aaKnown RBP12.58□□□□□ -0.4
PCF11-206ENST00000533018 C7orf66A4D0T2 115 aa12.57□□□□□ -0.4
PCF11-206ENST00000533018 FAM25EA8MYX2 175 aa12.57□□□□□ -0.4
PCF11-206ENST00000533018 COX7A2P2O60397 106 aa12.57□□□□□ -0.4
PCF11-206ENST00000533018 NUDT3O95989 172 aa12.57□□□□□ -0.4
PCF11-206ENST00000533018 IL7P13232 177 aa12.57□□□□□ -0.4
PCF11-206ENST00000533018 TSPOP30536 169 aa12.57□□□□□ -0.4
PCF11-206ENST00000533018 BCAP31P51572 246 aa12.57□□□□□ -0.4
PCF11-206ENST00000533018 ARL16Q0P5N6 197 aa12.57□□□□□ -0.4
PCF11-206ENST00000533018 ZNF846Q147U1 533 aa12.57□□□□□ -0.4
PCF11-206ENST00000533018 DYNC1H1Q14204 4646 aaKnown RBP12.57□□□□□ -0.4
PCF11-206ENST00000533018 DNAH11Q96DT5 4516 aa12.57□□□□□ -0.4
PCF11-206ENST00000533018 K7EPK0 472 aa12.56□□□□□ -0.4
PCF11-206ENST00000533018 CCSO14618 274 aa12.56□□□□□ -0.4
PCF11-206ENST00000533018 MBPP02686 304 aaPredicted RBP12.56□□□□□ -0.4
PCF11-206ENST00000533018 CDKN1BP46527 198 aa12.56□□□□□ -0.4
PCF11-206ENST00000533018 TAS2R60P59551 318 aa12.56□□□□□ -0.4
PCF11-206ENST00000533018 CNPY1Q3B7I2 92 aa12.56□□□□□ -0.4
PCF11-206ENST00000533018 LCN15Q6UWW0 184 aa12.56□□□□□ -0.4
PCF11-206ENST00000533018 Q6ZR54 194 aa12.56□□□□□ -0.4
PCF11-206ENST00000533018 BPIFA4PQ86YQ2 179 aa12.56□□□□□ -0.4
PCF11-206ENST00000533018 LSM5Q9Y4Y9 91 aaKnown RBP12.56□□□□□ -0.4
PCF11-206ENST00000533018 H3BTX0 84 aa12.55□□□□□ -0.4
PCF11-206ENST00000533018 ATP5G1P05496 136 aa12.55□□□□□ -0.4
PCF11-206ENST00000533018 CXCL2P19875 107 aa12.55□□□□□ -0.4
PCF11-206ENST00000533018 ATP5G3P48201 142 aa12.55□□□□□ -0.4
PCF11-206ENST00000533018 C1orf134Q5TEV5 83 aa12.55□□□□□ -0.4
PCF11-206ENST00000533018 C10orf113Q5VZT2 155 aa12.55□□□□□ -0.4
PCF11-206ENST00000533018 C16orf74Q96GX8 76 aa12.55□□□□□ -0.4
PCF11-206ENST00000533018 SLC50A1Q9BRV3 221 aa12.55□□□□□ -0.4
PCF11-206ENST00000533018 GGACTQ9BVM4 153 aa12.55□□□□□ -0.4
PCF11-206ENST00000533018 C20orf85Q9H1P6 137 aa12.55□□□□□ -0.4
PCF11-206ENST00000533018 PLAC8L1A1L4L8 177 aa12.54□□□□□ -0.4
PCF11-206ENST00000533018 MRPS12O15235 138 aaKnown RBP12.54□□□□□ -0.4
PCF11-206ENST00000533018 MED14OSP0DP75 135 aa12.54□□□□□ -0.4
PCF11-206ENST00000533018 CAV2P51636 162 aa12.54□□□□□ -0.4
PCF11-206ENST00000533018 RAB31Q13636 194 aa12.54□□□□□ -0.4
PCF11-206ENST00000533018 OR10J6PQ8NGY7 276 aa12.54□□□□□ -0.4
PCF11-206ENST00000533018 MGST2Q99735 147 aa12.54□□□□□ -0.4
PCF11-206ENST00000533018 ZNF331Q9NQX6 463 aaPredicted RBP12.54□□□□□ -0.4
PCF11-206ENST00000533018 TIMM8BQ9Y5J9 83 aaPredicted RBP12.54□□□□□ -0.4
PCF11-206ENST00000533018 TRAV6A0A075B6T7 132 aa12.53□□□□□ -0.4
PCF11-206ENST00000533018 C5orf51A6NDU8 294 aa12.53□□□□□ -0.4
PCF11-206ENST00000533018 CBY3A6NI87 242 aa12.53□□□□□ -0.4
PCF11-206ENST00000533018 LYRM1O43325 122 aa12.53□□□□□ -0.4
PCF11-206ENST00000533018 Q6ZRG5 221 aa12.53□□□□□ -0.4
PCF11-206ENST00000533018 TMEM37Q8WXS4 190 aa12.53□□□□□ -0.4
PCF11-206ENST00000533018 PARD6GQ9BYG4 376 aaPredicted RBP12.53□□□□□ -0.4
PCF11-206ENST00000533018 NOP10Q9NPE3 64 aaKnown RBP12.53□□□□□ -0.4
PCF11-206ENST00000533018 RYR1P21817 5038 aa12.53□□□□□ -0.4
PCF11-206ENST00000533018 MUC4Q99102 2169 aa12.52□□□□□ -0.4
PCF11-206ENST00000533018 CST7O76096 145 aa12.52□□□□□ -0.41
PCF11-206ENST00000533018 CAMLGP49069 296 aa12.52□□□□□ -0.41
PCF11-206ENST00000533018 FAM3BP58499 235 aaPredicted RBP12.52□□□□□ -0.41
PCF11-206ENST00000533018 OPCMLQ14982 345 aa12.52□□□□□ -0.41
PCF11-206ENST00000533018 PRAC2D3DTV9 90 aa12.51□□□□□ -0.41
PCF11-206ENST00000533018 H7BYZ3 331 aa12.51□□□□□ -0.41
PCF11-206ENST00000533018 J3KRW8 73 aa12.51□□□□□ -0.41
PCF11-206ENST00000533018 SLC17A3O00476 420 aa12.51□□□□□ -0.41
PCF11-206ENST00000533018 PLA2G10O15496 165 aa12.51□□□□□ -0.41
PCF11-206ENST00000533018 TCRBP04435 133 aa12.51□□□□□ -0.41
PCF11-206ENST00000533018 CCL18P55774 89 aa12.51□□□□□ -0.41
PCF11-206ENST00000533018 MORN5Q5VZ52 161 aa12.51□□□□□ -0.41
PCF11-206ENST00000533018 ZNF493Q6ZR52 646 aa12.51□□□□□ -0.41
PCF11-206ENST00000533018 NRARPQ7Z6K4 114 aa12.51□□□□□ -0.41
PCF11-206ENST00000533018 CCDC28AQ8IWP9 274 aa12.51□□□□□ -0.41
PCF11-206ENST00000533018 TMEM263Q8WUH6 116 aaKnown RBP12.51□□□□□ -0.41
PCF11-206ENST00000533018 SEC22CQ9BRL7 303 aa12.51□□□□□ -0.41
PCF11-206ENST00000533018 DNAJC4Q9NNZ3 241 aa12.51□□□□□ -0.41
PCF11-206ENST00000533018 FAM24AA6NFZ4 105 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms