RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 C16orf74Q96GX8 76 aa12.85□□□□□ -0.35
SSSCA1-206ENST00000531405 NOP10Q9NPE3 64 aaKnown RBP12.85□□□□□ -0.35
SSSCA1-206ENST00000531405 PSENENQ9NZ42 101 aa12.85□□□□□ -0.35
SSSCA1-206ENST00000531405 V9GYH0 126 aa12.85□□□□□ -0.35
SSSCA1-206ENST00000531405 SSSCA1O60232 199 aa12.84□□□□□ -0.35
SSSCA1-206ENST00000531405 NOL3O60936 208 aaKnown RBP12.84□□□□□ -0.35
SSSCA1-206ENST00000531405 SNRPCP09234 159 aaKnown RBP12.84□□□□□ -0.35
SSSCA1-206ENST00000531405 PLP1P60201 277 aa12.84□□□□□ -0.35
SSSCA1-206ENST00000531405 ID3Q02535 119 aa12.84□□□□□ -0.35
SSSCA1-206ENST00000531405 CLINT1Q14677 625 aa12.84□□□□□ -0.35
SSSCA1-206ENST00000531405 KIR3DS1Q14943 382 aa12.84□□□□□ -0.35
SSSCA1-206ENST00000531405 PATE2Q6UY27 113 aa12.84□□□□□ -0.35
SSSCA1-206ENST00000531405 SSX7Q7RTT5 188 aa12.84□□□□□ -0.35
SSSCA1-206ENST00000531405 RPUSD4Q96CM3 377 aaKnown RBP12.84□□□□□ -0.35
SSSCA1-206ENST00000531405 ARL6Q9H0F7 186 aa12.84□□□□□ -0.35
SSSCA1-206ENST00000531405 TIMM8BQ9Y5J9 83 aaPredicted RBP12.84□□□□□ -0.35
SSSCA1-206ENST00000531405 RNASE8Q8TDE3 154 aaKnown RBP12.83□□□□□ -0.36
SSSCA1-206ENST00000531405 PARD6GQ9BYG4 376 aaPredicted RBP12.83□□□□□ -0.36
SSSCA1-206ENST00000531405 MRPS12O15235 138 aaKnown RBP12.82□□□□□ -0.36
SSSCA1-206ENST00000531405 CDKN1BP46527 198 aa12.82□□□□□ -0.36
SSSCA1-206ENST00000531405 SELENOTP62341 195 aa12.82□□□□□ -0.36
SSSCA1-206ENST00000531405 SLC38A11Q08AI6 406 aa12.82□□□□□ -0.36
SSSCA1-206ENST00000531405 KRTAP1-5Q9BYS1 174 aa12.82□□□□□ -0.36
SSSCA1-206ENST00000531405 C9orf170A2RU37 121 aa12.81□□□□□ -0.36
SSSCA1-206ENST00000531405 METTL15P1P0C7V9 234 aa12.81□□□□□ -0.36
SSSCA1-206ENST00000531405 ANXA7P20073 488 aaKnown RBP12.81□□□□□ -0.36
SSSCA1-206ENST00000531405 OR5I1Q13606 314 aa12.81□□□□□ -0.36
SSSCA1-206ENST00000531405 SPATA12Q7Z6I5 190 aa12.81□□□□□ -0.36
SSSCA1-206ENST00000531405 TMEM263Q8WUH6 116 aaKnown RBP12.81□□□□□ -0.36
SSSCA1-206ENST00000531405 ARV1Q9H2C2 271 aa12.81□□□□□ -0.36
SSSCA1-206ENST00000531405 Q9H8V8 135 aa12.81□□□□□ -0.36
SSSCA1-206ENST00000531405 TRAV26-1A0A087WT03 109 aa12.8□□□□□ -0.36
SSSCA1-206ENST00000531405 A0A0J9YY99 117 aa12.8□□□□□ -0.36
SSSCA1-206ENST00000531405 DLK1P80370 383 aa12.8□□□□□ -0.36
SSSCA1-206ENST00000531405 ZNF493Q6ZR52 646 aa12.8□□□□□ -0.36
SSSCA1-206ENST00000531405 SMIM8Q96KF7 97 aa12.8□□□□□ -0.36
SSSCA1-206ENST00000531405 PRAC2D3DTV9 90 aa12.79□□□□□ -0.36
SSSCA1-206ENST00000531405 H3BTX0 84 aa12.79□□□□□ -0.36
SSSCA1-206ENST00000531405 H7BYZ3 331 aa12.79□□□□□ -0.36
SSSCA1-206ENST00000531405 UBE2MP61081 183 aaKnown RBP12.79□□□□□ -0.36
SSSCA1-206ENST00000531405 TMEM14EPQ6UXP3 125 aa12.79□□□□□ -0.36
SSSCA1-206ENST00000531405 GNPNAT1Q96EK6 184 aaPredicted RBP12.79□□□□□ -0.36
SSSCA1-206ENST00000531405 NPVFQ9HCQ7 196 aa12.79□□□□□ -0.36
SSSCA1-206ENST00000531405 ZNF331Q9NQX6 463 aaPredicted RBP12.79□□□□□ -0.36
SSSCA1-206ENST00000531405 FLVCR2Q9UPI3 526 aa12.79□□□□□ -0.36
SSSCA1-206ENST00000531405 K7EPK0 472 aa12.78□□□□□ -0.36
SSSCA1-206ENST00000531405 SLC17A3O00476 420 aa12.78□□□□□ -0.36
SSSCA1-206ENST00000531405 SCGB1D2O95969 90 aa12.78□□□□□ -0.36
SSSCA1-206ENST00000531405 HOXA5P20719 270 aa12.78□□□□□ -0.36
SSSCA1-206ENST00000531405 GFI1BQ5VTD9 330 aa12.78□□□□□ -0.36
SSSCA1-206ENST00000531405 TEPPQ6URK8 271 aa12.78□□□□□ -0.36
SSSCA1-206ENST00000531405 LCN15Q6UWW0 184 aa12.78□□□□□ -0.36
SSSCA1-206ENST00000531405 LINC00305Q7Z4B0 112 aa12.78□□□□□ -0.36
SSSCA1-206ENST00000531405 OR10J6PQ8NGY7 276 aa12.78□□□□□ -0.36
SSSCA1-206ENST00000531405 DEDD2Q8WXF8 326 aa12.78□□□□□ -0.36
SSSCA1-206ENST00000531405 MGAT4CQ9UBM8 478 aa12.78□□□□□ -0.36
SSSCA1-206ENST00000531405 GAGE12BA1L429 117 aa12.77□□□□□ -0.37
SSSCA1-206ENST00000531405 J3KRW8 73 aa12.77□□□□□ -0.37
SSSCA1-206ENST00000531405 ZNF701M0R085 212 aaPredicted RBP12.77□□□□□ -0.37
SSSCA1-206ENST00000531405 GAGE7O76087 117 aa12.77□□□□□ -0.37
SSSCA1-206ENST00000531405 GAGE12FP0CL80 117 aa12.77□□□□□ -0.37
SSSCA1-206ENST00000531405 GAGE12GP0CL81 117 aa12.77□□□□□ -0.37
SSSCA1-206ENST00000531405 GAGE12IP0CL82 117 aa12.77□□□□□ -0.37
SSSCA1-206ENST00000531405 CXCL2P19875 107 aa12.77□□□□□ -0.37
SSSCA1-206ENST00000531405 M6PRP20645 277 aa12.77□□□□□ -0.37
SSSCA1-206ENST00000531405 MORN5Q5VZ52 161 aa12.77□□□□□ -0.37
SSSCA1-206ENST00000531405 S100A7AQ86SG5 101 aa12.77□□□□□ -0.37
SSSCA1-206ENST00000531405 CCDC190Q86UF4 302 aa12.77□□□□□ -0.37
SSSCA1-206ENST00000531405 LINC00612Q8N6U2 182 aa12.77□□□□□ -0.37
SSSCA1-206ENST00000531405 OR10P1Q8NGE3 313 aa12.77□□□□□ -0.37
SSSCA1-206ENST00000531405 RXFP4Q8TDU9 374 aa12.77□□□□□ -0.37
SSSCA1-206ENST00000531405 FNDC10F2Z333 226 aa12.76□□□□□ -0.37
SSSCA1-206ENST00000531405 GOSR2O14653 212 aa12.76□□□□□ -0.37
SSSCA1-206ENST00000531405 AGPAT2O15120 278 aa12.76□□□□□ -0.37
SSSCA1-206ENST00000531405 KRTAP10-2P60368 255 aa12.76□□□□□ -0.37
SSSCA1-206ENST00000531405 ARL16Q0P5N6 197 aa12.76□□□□□ -0.37
SSSCA1-206ENST00000531405 ESRGQ1W209 222 aa12.76□□□□□ -0.37
SSSCA1-206ENST00000531405 Q8N1X5 172 aa12.76□□□□□ -0.37
SSSCA1-206ENST00000531405 SLC50A1Q9BRV3 221 aa12.76□□□□□ -0.37
SSSCA1-206ENST00000531405 Q9H3A6 140 aa12.76□□□□□ -0.37
SSSCA1-206ENST00000531405 NDUFB6O95139 128 aa12.75□□□□□ -0.37
SSSCA1-206ENST00000531405 OR4E1P0C645 316 aa12.75□□□□□ -0.37
SSSCA1-206ENST00000531405 S100A5P33763 92 aa12.75□□□□□ -0.37
SSSCA1-206ENST00000531405 TTC32Q5I0X7 151 aa12.75□□□□□ -0.37
SSSCA1-206ENST00000531405 ZNF546Q86UE3 836 aa12.75□□□□□ -0.37
SSSCA1-206ENST00000531405 CCDC28AQ8IWP9 274 aa12.75□□□□□ -0.37
SSSCA1-206ENST00000531405 ZBTB8BQ8NAP8 495 aaPredicted RBP12.75□□□□□ -0.37
SSSCA1-206ENST00000531405 C20orf144Q9BQM9 153 aa12.75□□□□□ -0.37
SSSCA1-206ENST00000531405 RCL1Q9Y2P8 373 aaKnown RBP12.75□□□□□ -0.37
SSSCA1-206ENST00000531405 LINC00854A0A1B0GVQ3 168 aa12.74□□□□□ -0.37
SSSCA1-206ENST00000531405 COX7A2P2O60397 106 aa12.74□□□□□ -0.37
SSSCA1-206ENST00000531405 RLN2P04090 185 aa12.74□□□□□ -0.37
SSSCA1-206ENST00000531405 OPCMLQ14982 345 aa12.74□□□□□ -0.37
SSSCA1-206ENST00000531405 IAH1Q2TAA2 248 aaPredicted RBP12.74□□□□□ -0.37
SSSCA1-206ENST00000531405 PXDC1Q5TGL8 231 aa12.74□□□□□ -0.37
SSSCA1-206ENST00000531405 BPIFA4PQ86YQ2 179 aa12.74□□□□□ -0.37
SSSCA1-206ENST00000531405 TMEM37Q8WXS4 190 aa12.74□□□□□ -0.37
SSSCA1-206ENST00000531405 ZNF503Q96F45 646 aa12.74□□□□□ -0.37
SSSCA1-206ENST00000531405 MGST2Q99735 147 aa12.74□□□□□ -0.37
SSSCA1-206ENST00000531405 SRRQ9GZT4 340 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms