RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 CHAC1Q9BUX1 264 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 MGAMO43451 1857 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 NDPQ00604 133 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 ATG2BQ96BY7 2078 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 PIKFYVEQ9Y2I7 2098 aa6.92□□□□□ -1.3
CTNND1-221ENST00000529873 IGHV3-64A0A075B6Q5 118 aa6.91□□□□□ -1.3
CTNND1-221ENST00000529873 FXYD7P58549 80 aa6.91□□□□□ -1.3
CTNND1-221ENST00000529873 LCN12Q6JVE5 192 aa6.91□□□□□ -1.3
CTNND1-221ENST00000529873 C20orf144Q9BQM9 153 aa6.91□□□□□ -1.3
CTNND1-221ENST00000529873 CXCL1P09341 107 aa6.91□□□□□ -1.3
CTNND1-221ENST00000529873 RPL35AP18077 110 aaKnown RBP6.91□□□□□ -1.3
CTNND1-221ENST00000529873 SELENOKQ9Y6D0 94 aa6.91□□□□□ -1.3
CTNND1-221ENST00000529873 TSC2P49815 1807 aa6.91□□□□□ -1.3
CTNND1-221ENST00000529873 A0A0U1RRA0 63 aa6.91□□□□□ -1.3
CTNND1-221ENST00000529873 MYMXA0A1B0GTQ4 84 aa6.91□□□□□ -1.3
CTNND1-221ENST00000529873 PIP4P2Q8N4L2 257 aa6.91□□□□□ -1.3
CTNND1-221ENST00000529873 F8W1H4 67 aa6.91□□□□□ -1.3
CTNND1-221ENST00000529873 ZNF474Q6S9Z5 364 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-221ENST00000529873 TEX43Q6ZNM6 134 aa6.91□□□□□ -1.3
CTNND1-221ENST00000529873 PRB4P10163 310 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-221ENST00000529873 KLHL30-AS1Q8NEE0 82 aa6.91□□□□□ -1.3
CTNND1-221ENST00000529873 TRBV24-1A0A075B6N3 115 aa6.9□□□□□ -1.3
CTNND1-221ENST00000529873 TRGV1A0A0A0MS02 117 aa6.9□□□□□ -1.3
CTNND1-221ENST00000529873 C9JAW5 83 aa6.9□□□□□ -1.3
CTNND1-221ENST00000529873 NTF4P34130 210 aa6.9□□□□□ -1.3
CTNND1-221ENST00000529873 RPL36AP83881 106 aaKnown RBP6.9□□□□□ -1.3
CTNND1-221ENST00000529873 FAM90A2PQ658T7 463 aa6.9□□□□□ -1.3
CTNND1-221ENST00000529873 Q8TCH9 128 aa6.9□□□□□ -1.3
CTNND1-221ENST00000529873 RPL36ALQ969Q0 106 aaKnown RBP6.9□□□□□ -1.3
CTNND1-221ENST00000529873 E7EQL1 145 aa6.9□□□□□ -1.3
CTNND1-221ENST00000529873 KIR3DS1Q14943 382 aa6.9□□□□□ -1.3
CTNND1-221ENST00000529873 NUP35Q8NFH5 326 aa6.9□□□□□ -1.3
CTNND1-221ENST00000529873 REG4Q9BYZ8 158 aa6.9□□□□□ -1.3
CTNND1-221ENST00000529873 GFRA4Q9GZZ7 299 aa6.9□□□□□ -1.3
CTNND1-221ENST00000529873 MSRB2Q9Y3D2 182 aa6.9□□□□□ -1.3
CTNND1-221ENST00000529873 RBM3P98179 157 aaKnown RBP6.9□□□□□ -1.31
CTNND1-221ENST00000529873 GUSBP1Q15486 140 aa6.9□□□□□ -1.31
CTNND1-221ENST00000529873 NEGR1Q7Z3B1 354 aa6.9□□□□□ -1.31
CTNND1-221ENST00000529873 TMEM75Q8N9X5 138 aa6.9□□□□□ -1.31
CTNND1-221ENST00000529873 RNASE2P10153 161 aaKnown RBP6.9□□□□□ -1.31
CTNND1-221ENST00000529873 ERCC8Q13216 396 aa6.9□□□□□ -1.31
CTNND1-221ENST00000529873 CCDC88CQ9P219 2028 aa6.9□□□□□ -1.31
CTNND1-221ENST00000529873 GATA3P23771 443 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 LCNL1Q6ZST4 164 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 LINC01551Q86U37 167 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 ZNF625Q96I27 306 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-221ENST00000529873 C1QTNF4Q9BXJ3 329 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 SRRM4A7MD48 611 aaKnown RBP6.89□□□□□ -1.31
CTNND1-221ENST00000529873 C15orf62A8K5M9 175 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 VCYO14598 125 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 LSM4Q9Y4Z0 139 aaKnown RBP6.89□□□□□ -1.31
CTNND1-221ENST00000529873 FNDC1Q4ZHG4 1894 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-221ENST00000529873 K7EP34 96 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 RNF144BQ7Z419 303 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 RPRMLQ8N4K4 120 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 PPDPFLQ8WWR9 84 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 RNF114Q9Y508 228 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 A0A087WX48 190 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 ZNF876PQ49A33 203 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 Q86TA4 180 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 FAM110DQ8TAY7 271 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-221ENST00000529873 RNASE8Q8TDE3 154 aaKnown RBP6.89□□□□□ -1.31
CTNND1-221ENST00000529873 RLFQ13129 1914 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 SAA4P35542 130 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 SHANK2-AS3Q9BTD1 123 aa6.89□□□□□ -1.31
CTNND1-221ENST00000529873 BPESC1Q9GZL8 116 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 ZNF581Q9P0T4 197 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 SPAG17Q6Q759 2223 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 LINC01619G3V211 115 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 K7ENP7 123 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 CFPP27918 469 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 RUSC1-AS1Q66K80 236 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 ZNF833PQ6ZTB9 187 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 C5orf24Q7Z6I8 188 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 HAPLN4Q86UW8 402 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 UBE2E1P51965 193 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 SP5Q6BEB4 398 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-221ENST00000529873 DMRTC2Q8IXT2 367 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-221ENST00000529873 NAA38Q9BRA0 125 aaKnown RBP6.88□□□□□ -1.31
CTNND1-221ENST00000529873 RHPN1-AS1Q9BWJ2 59 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 DAZ1Q9NQZ3 744 aaKnown RBP6.88□□□□□ -1.31
CTNND1-221ENST00000529873 NPC2P61916 151 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 C6orf226Q5I0X4 101 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 IGHV3-53P01767 116 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 OXLD1Q5BKU9 147 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 Q8TAT8 98 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 PTH2Q96A98 100 aa6.88□□□□□ -1.31
CTNND1-221ENST00000529873 F5P12259 2224 aa6.87□□□□□ -1.31
CTNND1-221ENST00000529873 MPV17L2Q567V2 206 aa6.87□□□□□ -1.31
CTNND1-221ENST00000529873 TDRD6O60522 2096 aaKnown RBP6.87□□□□□ -1.31
CTNND1-221ENST00000529873 FHL1Q13642 323 aa6.87□□□□□ -1.31
CTNND1-221ENST00000529873 RPP25LQ8N5L8 163 aaKnown RBP6.87□□□□□ -1.31
CTNND1-221ENST00000529873 C20orf173Q96LM9 149 aa6.87□□□□□ -1.31
CTNND1-221ENST00000529873 MSMBP08118 114 aa6.87□□□□□ -1.31
CTNND1-221ENST00000529873 PDE6HQ13956 83 aa6.87□□□□□ -1.31
CTNND1-221ENST00000529873 IGFL4Q6B9Z1 124 aa6.87□□□□□ -1.31
CTNND1-221ENST00000529873 IL17RELQ6ZVW7 336 aa6.87□□□□□ -1.31
CTNND1-221ENST00000529873 MRPL27Q9P0M9 148 aaKnown RBP6.87□□□□□ -1.31
CTNND1-221ENST00000529873 TANC1Q9C0D5 1861 aa6.87□□□□□ -1.31
CTNND1-221ENST00000529873 TICRRQ7Z2Z1 1910 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms