RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ASB13Q8WXK3 278 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 CACNG8Q8WXS5 425 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 EEF1AKMT3Q96AZ1 226 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 OR5B12Q96R08 314 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 OR4C12Q96R67 309 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 TXN2Q99757 166 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 NDUFAF3Q9BU61 184 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 RNF126Q9BV68 326 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 NMES1Q9C002 83 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 ZNF436Q9C0F3 470 aaPredicted RBP2.33□□□□□ -2.04
VPS13B-209ENST00000521559 MAGT1Q9H0U3 335 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 C11orf1Q9H5F2 150 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 Q9HAA7 133 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 C21orf62Q9NYP8 219 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 PSENENQ9NZ42 101 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 PEF1Q9UBV8 284 aaKnown RBP2.33□□□□□ -2.04
VPS13B-209ENST00000521559 RCL1Q9Y2P8 373 aaKnown RBP2.33□□□□□ -2.04
VPS13B-209ENST00000521559 LSM5Q9Y4Y9 91 aaKnown RBP2.33□□□□□ -2.04
VPS13B-209ENST00000521559 KIF25-AS1Q9Y6Z4 181 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 S4R3C0 116 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 DOCK11Q5JSL3 2073 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 TLN2Q9Y4G6 2542 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 DSCAML1Q8TD84 2053 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 TRAV30A0A087WSZ9 112 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 IGHV3-21A0A0B4J1V1 117 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 FAM24AA6NFZ4 105 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 FNDC10F2Z333 226 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 LINC01619G3V211 115 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 NUPL2O15504 423 aaKnown RBP2.32□□□□□ -2.04
VPS13B-209ENST00000521559 TGOLN2O43493 480 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 SSSCA1O60232 199 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 TSC22D2O75157 780 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 GGCTO75223 188 aaKnown RBP2.32□□□□□ -2.04
VPS13B-209ENST00000521559 DEDDO75618 318 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 TRBV12-3P01733 135 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 IGHV3-48P01763 117 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 IGHV3-23P01764 117 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 GIPP09681 153 aaPredicted RBP2.32□□□□□ -2.04
VPS13B-209ENST00000521559 OR8U8P0C7N1 319 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 SLC25A4P12235 298 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 PVALBP20472 110 aaPredicted RBP2.32□□□□□ -2.04
VPS13B-209ENST00000521559 ZP3P21754 424 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 OPRK1P41145 380 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 P2RY1P47900 373 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 CAMLGP49069 296 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 BCAP31P51572 246 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 S100A10P60903 97 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 DEFA5Q01523 94 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 FGL1Q08830 312 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 ZNF616Q08AN1 781 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 Q1RN00 199 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 DEFB136Q30KP8 78 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 Q56UQ5 140 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 PRSS54Q6PEW0 395 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 TMEM14EPQ6UXP3 125 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 CLEC19AQ6UXS0 136 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 SLC16A13Q7RTY0 426 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 GPHB5Q86YW7 130 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 TMEM252Q8N6L7 170 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 OR11H1Q8NG94 326 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 OR10P1Q8NGE3 313 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 OR1S2Q8NGQ3 325 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 OR4X1Q8NH49 305 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 PPP1R1CQ8WVI7 109 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 DCUN1D4Q92564 292 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 PINX1Q96BK5 328 aaKnown RBP2.32□□□□□ -2.04
VPS13B-209ENST00000521559 SLC35E1Q96K37 410 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 NRN1Q9NPD7 142 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 CLEC5AQ9NY25 188 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 MRPL36Q9P0J6 103 aaKnown RBP2.32□□□□□ -2.04
VPS13B-209ENST00000521559 PRO0461Q9UI25 63 aa2.32□□□□□ -2.04
VPS13B-209ENST00000521559 PAIP2BQ9ULR5 123 aaKnown RBP2.32□□□□□ -2.04
VPS13B-209ENST00000521559 NBPF19A0A087WUL8 3843 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 TEP1Q99973 2627 aaKnown RBP2.31□□□□□ -2.04
VPS13B-209ENST00000521559 TRAV14DV4A0A0A6YYC5 116 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 IGSF23A1L1A6 192 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 OR2T8A6NH00 312 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 PPP5D1E7EU14 171 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 H3BP45 60 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 K7EMT4 169 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 LGALS9O00182 355 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 OVOL1O14753 267 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 GNG7O60262 68 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 SCGB2A1O75556 95 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 CCNKO75909 580 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 CST7O76096 145 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 MPC2O95563 127 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 IGKV1-17P01599 117 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 FABP1P07148 127 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 CTSGP08311 255 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 METTL15P1P0C7V9 234 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 IGLC1P0CG04 106 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 PET100P0DJ07 73 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 RD3LP0DJH9 198 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 OR10J1P30954 320 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 S100A11P31949 105 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 SULT1A1P50225 295 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 CAV2P51636 162 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 RND2P52198 227 aa2.31□□□□□ -2.04
VPS13B-209ENST00000521559 SYNJ2BPP57105 145 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms