RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, human

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-208	ENST00000518344	SLC35B3	Q9H1N7	401 aa		13.55	□□□□□ -0.24
FAM49B-208	ENST00000518344	C11orf68	Q9H3H3	251 aa	Known RBP	13.55	□□□□□ -0.24
FAM49B-208	ENST00000518344		X6R8D5	127 aa		13.55	□□□□□ -0.24
FAM49B-208	ENST00000518344	AGRN	O00468	2067 aa		13.55	□□□□□ -0.24
FAM49B-208	ENST00000518344	IGHV4-28	A0A0C4DH34	117 aa		13.54	□□□□□ -0.24
FAM49B-208	ENST00000518344		H3BTX0	84 aa		13.54	□□□□□ -0.24
FAM49B-208	ENST00000518344	ZNF705D	P0CH99	300 aa	Predicted RBP	13.54	□□□□□ -0.24
FAM49B-208	ENST00000518344	ZNF705B	P0CI00	300 aa	Predicted RBP	13.54	□□□□□ -0.24
FAM49B-208	ENST00000518344	MIF	P14174	115 aa		13.54	□□□□□ -0.24
FAM49B-208	ENST00000518344	C11orf45	Q8TAV5	145 aa		13.54	□□□□□ -0.24
FAM49B-208	ENST00000518344	CLUHP3	Q96NS8	147 aa		13.54	□□□□□ -0.24
FAM49B-208	ENST00000518344	MED28	Q9H204	178 aa		13.54	□□□□□ -0.24
FAM49B-208	ENST00000518344	MBD2	Q9UBB5	411 aa		13.54	□□□□□ -0.24
FAM49B-208	ENST00000518344	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.53	□□□□□ -0.24
FAM49B-208	ENST00000518344	IGHV3OR16-12	A0A075B7B8	117 aa		13.53	□□□□□ -0.24
FAM49B-208	ENST00000518344	DUSP14	O95147	198 aa	Known RBP	13.53	□□□□□ -0.24
FAM49B-208	ENST00000518344	RBMY1A1	P0DJD3	496 aa	Known RBP	13.53	□□□□□ -0.24
FAM49B-208	ENST00000518344	RBMY1C	P0DJD4	496 aa		13.53	□□□□□ -0.24
FAM49B-208	ENST00000518344	PRB4	P10163	310 aa	Predicted RBP	13.53	□□□□□ -0.24
FAM49B-208	ENST00000518344	RPL12	P30050	165 aa	Known RBP	13.53	□□□□□ -0.24
FAM49B-208	ENST00000518344	NANOS2	P60321	138 aa	Known RBP	13.53	□□□□□ -0.24
FAM49B-208	ENST00000518344	RBMY1F	Q15415	496 aa	Known RBP	13.53	□□□□□ -0.24
FAM49B-208	ENST00000518344	PSG3	Q16557	428 aa		13.53	□□□□□ -0.24
FAM49B-208	ENST00000518344	LCN15	Q6UWW0	184 aa		13.53	□□□□□ -0.24
FAM49B-208	ENST00000518344	ZNF709	Q8N972	641 aa		13.53	□□□□□ -0.24
FAM49B-208	ENST00000518344	MFF	Q9GZY8	342 aa		13.53	□□□□□ -0.24
FAM49B-208	ENST00000518344	HSPB11	Q9Y547	144 aa		13.53	□□□□□ -0.24
FAM49B-208	ENST00000518344	CNN1	P51911	297 aa	Known RBP	13.52	□□□□□ -0.25
FAM49B-208	ENST00000518344	FCN2	Q15485	313 aa		13.52	□□□□□ -0.25
FAM49B-208	ENST00000518344	GCSAML	Q5JQS6	135 aa		13.52	□□□□□ -0.25
FAM49B-208	ENST00000518344	ATP5S	Q99766	215 aa		13.52	□□□□□ -0.25
FAM49B-208	ENST00000518344	SMIM3	Q9BZL3	60 aa		13.52	□□□□□ -0.25
FAM49B-208	ENST00000518344	WDR61	Q9GZS3	305 aa	Known RBP	13.52	□□□□□ -0.25
FAM49B-208	ENST00000518344		H3BQ15	152 aa		13.51	□□□□□ -0.25
FAM49B-208	ENST00000518344	CXCL2	P19875	107 aa		13.51	□□□□□ -0.25
FAM49B-208	ENST00000518344	OR11H7	Q8NGC8	314 aa		13.51	□□□□□ -0.25
FAM49B-208	ENST00000518344	SLC50A1	Q9BRV3	221 aa		13.51	□□□□□ -0.25
FAM49B-208	ENST00000518344	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.51	□□□□□ -0.25
FAM49B-208	ENST00000518344	RYR3	Q15413	4870 aa		13.5	□□□□□ -0.25
FAM49B-208	ENST00000518344	LCE6A	A0A183	80 aa		13.5	□□□□□ -0.25
FAM49B-208	ENST00000518344	NUPR2	A6NF83	97 aa		13.5	□□□□□ -0.25
FAM49B-208	ENST00000518344	IGLC2	P0DOY2	106 aa		13.5	□□□□□ -0.25
FAM49B-208	ENST00000518344	HIST1H1A	Q02539	215 aa	Predicted RBP	13.5	□□□□□ -0.25
FAM49B-208	ENST00000518344	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.5	□□□□□ -0.25
FAM49B-208	ENST00000518344	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.5	□□□□□ -0.25
FAM49B-208	ENST00000518344	RPUSD4	Q96CM3	377 aa	Known RBP	13.5	□□□□□ -0.25
FAM49B-208	ENST00000518344	HRH4	Q9H3N8	390 aa		13.5	□□□□□ -0.25
FAM49B-208	ENST00000518344	C17orf112	F2Z3M2	114 aa		13.49	□□□□□ -0.25
FAM49B-208	ENST00000518344	SLC17A3	O00476	420 aa		13.49	□□□□□ -0.25
FAM49B-208	ENST00000518344	IFNA5	P01569	189 aa		13.49	□□□□□ -0.25
FAM49B-208	ENST00000518344	RHOB	P62745	196 aa		13.49	□□□□□ -0.25
FAM49B-208	ENST00000518344	RGS21	Q2M5E4	152 aa		13.49	□□□□□ -0.25
FAM49B-208	ENST00000518344	AMTN	Q6UX39	209 aa		13.49	□□□□□ -0.25
FAM49B-208	ENST00000518344	OR8A1	Q8NGG7	326 aa		13.49	□□□□□ -0.25
FAM49B-208	ENST00000518344	SCGB1C1	Q8TD33	95 aa		13.49	□□□□□ -0.25
FAM49B-208	ENST00000518344	KCNIP2	Q9NS61	270 aa		13.49	□□□□□ -0.25
FAM49B-208	ENST00000518344	PPP1R14D	Q9NXH3	145 aa		13.49	□□□□□ -0.25
FAM49B-208	ENST00000518344		A8MTW9	85 aa		13.48	□□□□□ -0.25
FAM49B-208	ENST00000518344	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.48	□□□□□ -0.25
FAM49B-208	ENST00000518344	JTB	O76095	146 aa		13.48	□□□□□ -0.25
FAM49B-208	ENST00000518344	GUK1	Q16774	197 aa		13.48	□□□□□ -0.25
FAM49B-208	ENST00000518344	SPINK13	Q1W4C9	94 aa		13.48	□□□□□ -0.25
FAM49B-208	ENST00000518344	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.48	□□□□□ -0.25
FAM49B-208	ENST00000518344	SAT2	Q96F10	170 aa	Predicted RBP	13.48	□□□□□ -0.25
FAM49B-208	ENST00000518344	ZNF586	Q9NXT0	402 aa		13.48	□□□□□ -0.25
FAM49B-208	ENST00000518344	KLK5	Q9Y337	293 aa	Predicted RBP	13.48	□□□□□ -0.25
FAM49B-208	ENST00000518344	GOLT1B	Q9Y3E0	138 aa		13.48	□□□□□ -0.25
FAM49B-208	ENST00000518344		M0R2Z0	102 aa		13.47	□□□□□ -0.25
FAM49B-208	ENST00000518344	WFDC1	Q9HC57	220 aa		13.47	□□□□□ -0.25
FAM49B-208	ENST00000518344	SACS	Q9NZJ4	4579 aa		13.46	□□□□□ -0.25
FAM49B-208	ENST00000518344	PYY	P10082	97 aa		13.46	□□□□□ -0.25
FAM49B-208	ENST00000518344	EMP1	P54849	157 aa		13.46	□□□□□ -0.25
FAM49B-208	ENST00000518344	MIR17HG	Q75NE6	70 aa		13.46	□□□□□ -0.25
FAM49B-208	ENST00000518344	C1orf158	Q8N1D5	194 aa		13.46	□□□□□ -0.25
FAM49B-208	ENST00000518344	IGF2BP2-AS1	Q96M15	143 aa		13.46	□□□□□ -0.25
FAM49B-208	ENST00000518344	NEU1	Q99519	415 aa		13.46	□□□□□ -0.25
FAM49B-208	ENST00000518344	TMEM208	Q9BTX3	173 aa		13.46	□□□□□ -0.25
FAM49B-208	ENST00000518344	TMEM14C	Q9P0S9	112 aa		13.46	□□□□□ -0.25
FAM49B-208	ENST00000518344	SMIM9	A6NGZ8	99 aa		13.45	□□□□□ -0.26
FAM49B-208	ENST00000518344	PRAC2	D3DTV9	90 aa		13.45	□□□□□ -0.26
FAM49B-208	ENST00000518344	AMBP	P02760	352 aa		13.45	□□□□□ -0.26
FAM49B-208	ENST00000518344	HIST1H1E	P10412	219 aa	Known RBP	13.45	□□□□□ -0.26
FAM49B-208	ENST00000518344	BLNK	Q8WV28	456 aa		13.45	□□□□□ -0.26
FAM49B-208	ENST00000518344	SLC25A2	Q9BXI2	301 aa		13.45	□□□□□ -0.26
FAM49B-208	ENST00000518344	TIMM9	Q9Y5J7	89 aa		13.45	□□□□□ -0.26
FAM49B-208	ENST00000518344	PLEC	Q15149	4684 aa	Known RBP	13.45	□□□□□ -0.26
FAM49B-208	ENST00000518344	LYST	Q99698	3801 aa		13.45	□□□□□ -0.26
FAM49B-208	ENST00000518344	TRBV19	A0A075B6N1	114 aa		13.44	□□□□□ -0.26
FAM49B-208	ENST00000518344	TRAV12-2	A0A075B6T6	113 aa		13.44	□□□□□ -0.26
FAM49B-208	ENST00000518344	BOLA2-SMG1P6	H3BVE0	249 aa		13.44	□□□□□ -0.26
FAM49B-208	ENST00000518344	FFAR4	Q5NUL3	377 aa		13.44	□□□□□ -0.26
FAM49B-208	ENST00000518344	OR10J6P	Q8NGY7	276 aa		13.44	□□□□□ -0.26
FAM49B-208	ENST00000518344	CELA1	Q9UNI1	258 aa		13.44	□□□□□ -0.26
FAM49B-208	ENST00000518344	RFNG	Q9Y644	331 aa		13.44	□□□□□ -0.26
FAM49B-208	ENST00000518344	TENM2	Q9NT68	2774 aa		13.43	□□□□□ -0.26
FAM49B-208	ENST00000518344	CRX	O43186	299 aa	Predicted RBP	13.43	□□□□□ -0.26
FAM49B-208	ENST00000518344	INS	P01308	110 aa		13.43	□□□□□ -0.26
FAM49B-208	ENST00000518344	HBE1	P02100	147 aa		13.43	□□□□□ -0.26
FAM49B-208	ENST00000518344	GIP	P09681	153 aa	Predicted RBP	13.43	□□□□□ -0.26
FAM49B-208	ENST00000518344	OXA1L	Q15070	435 aa		13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms