RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 RRN3P1Q2M238 152 aa7.45□□□□□ -1.22
HMGXB3-205ENST00000514469 VWC2Q2TAL6 325 aa7.45□□□□□ -1.22
HMGXB3-205ENST00000514469 LINC00305Q7Z4B0 112 aa7.45□□□□□ -1.22
HMGXB3-205ENST00000514469 C12orf45Q8N5I9 185 aaPredicted RBP7.45□□□□□ -1.22
HMGXB3-205ENST00000514469 C2orf50Q96LR7 162 aa7.45□□□□□ -1.22
HMGXB3-205ENST00000514469 NDUFAF3Q9BU61 184 aa7.45□□□□□ -1.22
HMGXB3-205ENST00000514469 YTHDF2Q9Y5A9 579 aaKnown RBP7.45□□□□□ -1.22
HMGXB3-205ENST00000514469 DNAH17Q9UFH2 4485 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 FAM240BA0A1B0GVZ2 78 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 C5orf51A6NDU8 294 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 COX7A2P2O60397 106 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 BCAP31P51572 246 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 CAV2P51636 162 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 HIST1H1AQ02539 215 aaPredicted RBP7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 IL15RAQ13261 267 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 ASAH1Q13510 395 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 PSG3Q16557 428 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 MORN5Q5VZ52 161 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 LCN15Q6UWW0 184 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 BAP18Q8IXM2 172 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 OR8A1Q8NGG7 326 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 TMEM37Q8WXS4 190 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 SLC50A1Q9BRV3 221 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 NIPSNAP3BQ9BS92 247 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 TMEM208Q9BTX3 173 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 ZNF331Q9NQX6 463 aaPredicted RBP7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 LYRM2Q9NU23 88 aaPredicted RBP7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 WDR83OSQ9Y284 106 aa7.44□□□□□ -1.22
HMGXB3-205ENST00000514469 FAM24AA6NFZ4 105 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 CST7O76096 145 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 P0DMU3 169 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 FAM231AP0DMU4 169 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 FAM231CP0DMU5 169 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 IGLC2P0DOY2 106 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 PVALBP20472 110 aaPredicted RBP7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 TSPOP30536 169 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 CAMLGP49069 296 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 SULT1A1P50225 295 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 S100A10P60903 97 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 OPCMLQ14982 345 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 MZT2BQ6NZ67 158 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 NRARPQ7Z6K4 114 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 BPIFA4PQ86YQ2 179 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 LRRC20Q8TCA0 184 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 S100ZQ8WXG8 99 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 FAM210BQ96KR6 192 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 UQCC1Q9NVA1 299 aa7.43□□□□□ -1.22
HMGXB3-205ENST00000514469 HERC2O95714 4834 aa7.42□□□□□ -1.22
HMGXB3-205ENST00000514469 TRAV12-2A0A075B6T6 113 aa7.42□□□□□ -1.22
HMGXB3-205ENST00000514469 IGSF23A1L1A6 192 aa7.42□□□□□ -1.22
HMGXB3-205ENST00000514469 SLC17A3O00476 420 aa7.42□□□□□ -1.22
HMGXB3-205ENST00000514469 B2MP61769 119 aa7.42□□□□□ -1.22
HMGXB3-205ENST00000514469 RAB32Q13637 225 aa7.42□□□□□ -1.22
HMGXB3-205ENST00000514469 C10orf113Q5VZT2 155 aa7.42□□□□□ -1.22
HMGXB3-205ENST00000514469 MIC13Q5XKP0 118 aa7.42□□□□□ -1.22
HMGXB3-205ENST00000514469 POM121L12Q8N7R1 296 aa7.42□□□□□ -1.22
HMGXB3-205ENST00000514469 RPUSD4Q96CM3 377 aaKnown RBP7.42□□□□□ -1.22
HMGXB3-205ENST00000514469 PLA2G2EQ9NZK7 142 aa7.42□□□□□ -1.22
HMGXB3-205ENST00000514469 UBE2L5PA0A1B0GUS4 154 aa7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 PLAC8L1A1L4L8 177 aa7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 LYRM9A8MSI8 78 aa7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 ZNF705GA8MUZ8 300 aaPredicted RBP7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 PRM2P04554 102 aa7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 SNRPCP09234 159 aaKnown RBP7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 S100A11P31949 105 aa7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 RPL29P47914 159 aaKnown RBP7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 DAD1P61803 113 aa7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 RHOBP62745 196 aa7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 RAB31Q13636 194 aa7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 STX12Q86Y82 276 aa7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 TMEM256Q8N2U0 113 aa7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 TMEM252Q8N6L7 170 aa7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 OR1L4Q8NGR5 311 aa7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 CHAC2Q8WUX2 184 aa7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 SAT2Q96F10 170 aaPredicted RBP7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 PFDN5Q99471 154 aa7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 DNAJC4Q9NNZ3 241 aa7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 PXMP4Q9Y6I8 212 aa7.41□□□□□ -1.22
HMGXB3-205ENST00000514469 H3BQ15 152 aa7.4□□□□□ -1.22
HMGXB3-205ENST00000514469 H3BTX0 84 aa7.4□□□□□ -1.22
HMGXB3-205ENST00000514469 UPK1BO75841 260 aa7.4□□□□□ -1.22
HMGXB3-205ENST00000514469 PRB4P10163 310 aaPredicted RBP7.4□□□□□ -1.22
HMGXB3-205ENST00000514469 HTN3P15516 51 aa7.4□□□□□ -1.22
HMGXB3-205ENST00000514469 CDKN1BP46527 198 aa7.4□□□□□ -1.22
HMGXB3-205ENST00000514469 TAS2R60P59551 318 aa7.4□□□□□ -1.22
HMGXB3-205ENST00000514469 HBG1P69891 147 aa7.4□□□□□ -1.22
HMGXB3-205ENST00000514469 HBG2P69892 147 aa7.4□□□□□ -1.22
HMGXB3-205ENST00000514469 BAXQ07812 192 aa7.4□□□□□ -1.22
HMGXB3-205ENST00000514469 Q6ZRG5 221 aa7.4□□□□□ -1.22
HMGXB3-205ENST00000514469 ENKURQ8TC29 256 aa7.4□□□□□ -1.22
HMGXB3-205ENST00000514469 SLC39A9Q9NUM3 307 aa7.4□□□□□ -1.22
HMGXB3-205ENST00000514469 PPP1R14DQ9NXH3 145 aa7.4□□□□□ -1.22
HMGXB3-205ENST00000514469 PKD1P98161 4303 aa7.39□□□□□ -1.23
HMGXB3-205ENST00000514469 TRAV5A0A0B4J249 113 aa7.39□□□□□ -1.23
HMGXB3-205ENST00000514469 PRAC2D3DTV9 90 aa7.39□□□□□ -1.23
HMGXB3-205ENST00000514469 ZNF253O75346 499 aa7.39□□□□□ -1.23
HMGXB3-205ENST00000514469 AZU1P20160 251 aa7.39□□□□□ -1.23
HMGXB3-205ENST00000514469 FGF7P21781 194 aa7.39□□□□□ -1.23
HMGXB3-205ENST00000514469 IFITM3Q01628 133 aa7.39□□□□□ -1.23
HMGXB3-205ENST00000514469 GUK1Q16774 197 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms