RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 PRR4Q16378 134 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 Q6ZUT4 128 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 ZNF627Q7L945 461 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 ZNF329Q86UD4 541 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 C10orf126Q8N4M7 172 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 FAM104AQ969W3 186 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 MRPL32Q9BYC8 188 aaKnown RBP4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 NPVFQ9HCQ7 196 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 MED9Q9NWA0 146 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 LSM2Q9Y333 95 aaKnown RBP4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 TRIOBPQ9H2D6 2365 aa4.53□□□□□ -1.68
TRAPPC11-209ENST00000512476 LY6G6EA0A0G2JKS1 128 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 SMIM1B2RUZ4 78 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 CDC42EP2O14613 210 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 GEMIN2O14893 280 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 PPP1R3DO95685 299 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 IGLV2-23P01705 113 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 CRYGSP22914 178 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 DCDP81605 110 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 NR2C2APQ86WQ0 139 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 NRACQ8N912 160 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 ITLN1Q8WWA0 313 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 C6orf106Q9H6K1 298 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 TUBA4BQ9H853 241 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 FGF22Q9HCT0 170 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 ZNF324O75467 553 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 CST7O76096 145 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 DUSP14O95147 198 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 NCR2O95944 276 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 IGHV4-34P06331 123 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 CD28P10747 220 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 ZNF14P17017 642 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 LGALS3P17931 250 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 ATP5G2Q06055 141 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 LGALS9BQ3B8N2 356 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 ZC2HC1BQ5TFG8 222 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 LGALS9CQ6DKI2 356 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 BPIFA4PQ86YQ2 179 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 ZNF101Q8IZC7 436 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 OR8A1Q8NGG7 326 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 NEUROG1Q92886 237 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 MS4A6EQ96DS6 147 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 F5P12259 2224 aa4.52□□□□□ -1.69
TRAPPC11-209ENST00000512476 HCFC1P51610 2035 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 DOCK9Q9BZ29 2069 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 IGHV1-45A0A0A0MS14 117 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 PEX7O00628 323 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 CGB3P0DN86 165 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 CGB7P0DN87 165 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 FOXF1Q12946 379 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 TMEM183BQ1AE95 376 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 LINC01554Q52M75 96 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 OR5H2Q8NGV7 314 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 VAMP8Q9BV40 100 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 RERGLQ9H628 205 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 IL36BQ9NZH7 164 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 CCDC167Q9P0B6 97 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 SPTBN5Q9NRC6 3674 aaKnown RBP4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 NUMA1Q14980 2115 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 IGHV1OR15-9A0A0B4J2B8 117 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 ZNF880Q6PDB4 577 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 SLC25A42Q86VD7 318 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 MSRB3Q8IXL7 192 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 ATOH7Q8N100 152 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 KCNRGQ8N5I3 272 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 OR10G2Q8NGC3 310 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 ASF1BQ9NVP2 202 aa4.51□□□□□ -1.69
TRAPPC11-209ENST00000512476 GRIFINA4D1Z8 144 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 SOCS1O15524 211 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 TNFP01375 233 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 NMBP08949 121 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 NUDT2P50583 147 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 DEFA5Q01523 94 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 AKR1C1Q04828 323 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 TWIST1Q15672 202 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 KHDC3LQ587J8 217 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 C9orf153Q5TBE3 101 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 C18orf65Q6ZTR6 163 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 ITLN2Q8WWU7 325 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 SLC25A46Q96AG3 418 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 LINC00312Q9Y6C7 94 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 UNC80Q8N2C7 3258 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 EYSQ5T1H1 3165 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 TANC2Q9HCD6 1990 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 C9JCJ5 164 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 RPL38P63173 70 aaKnown RBP4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 SS18Q15532 418 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 DEFB107AQ8IZN7 70 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 CCL4L1Q8NHW4 92 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 DPY30Q9C005 99 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 RPRMQ9NS64 109 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 CHCHD2Q9Y6H1 151 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 HEATR5AQ86XA9 2040 aa4.5□□□□□ -1.69
TRAPPC11-209ENST00000512476 LRP4O75096 1905 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 COLCA2A8K830 154 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 IGLV2-14P01704 120 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 HIST1H2BOP23527 126 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 HIST1H2BBP33778 126 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 HIST1H2BDP58876 126 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms