RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 NPIPB3Q92617 1050 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 TM2D2Q9BX73 214 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 EIF3GO75821 320 aaKnown RBP eCLIP4.03□□□□□ -1.76
PTPN13-209ENST00000511467 SRP19P09132 144 aaKnown RBP4.03□□□□□ -1.76
PTPN13-209ENST00000511467 PSG1P11464 419 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 SCGB1A1P11684 91 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 A0A1B0GWB2 263 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 A0A1W2PP11 408 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 PIN1P1O15428 100 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 KLK2P20151 261 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 H2BFSP57053 126 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 TMEM88Q6PEY1 159 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 SLC7A5P1Q8MH63 180 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 C11orf52Q96A22 123 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 BRI3O95415 125 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 LINC00614P0C842 121 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 CKS1BP61024 79 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 SHANK2-AS3Q9BTD1 123 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 NDUFA4L2Q9NRX3 87 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 SETD2Q9BYW2 2564 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-209ENST00000511467 TRAV13-2A0A0B4J235 113 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 PRSS46E5RG02 174 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 LHBP01229 141 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 PAX9P55771 341 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 C9orf66Q5T8R8 295 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 RGP1Q92546 391 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-209ENST00000511467 EAF1Q96JC9 268 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-209ENST00000511467 C17orf98A8MV24 154 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 ATXN8Q156A1 80 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 C15orf32Q32M92 178 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 HILPDAQ9Y5L2 63 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 TMEM50AO95807 157 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 ADMP35318 185 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 RPL32P62910 135 aaKnown RBP4.02□□□□□ -1.77
PTPN13-209ENST00000511467 VWC2Q2TAL6 325 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 SPATA45Q537H7 98 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 C11orf68Q9H3H3 251 aaKnown RBP4.02□□□□□ -1.77
PTPN13-209ENST00000511467 VPREB3Q9UKI3 123 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 GGTLC3B5MD39 225 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 TGFAP01135 160 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 IGHV1-69P01742 117 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 IGHV2-5P01817 119 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 DDTP30046 118 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 MIC13Q5XKP0 118 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 ATP5G1P05496 136 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 ATP5G3P48201 142 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 ICAM4Q14773 271 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 OCIAD2Q56VL3 154 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 GGTLC1Q9BX51 225 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 IGHV1-24A0A0C4DH33 117 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 A0A0G2JNJ9 132 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 TEX43Q6ZNM6 134 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 Q9UFV3 132 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 FASNP49327 2511 aaKnown RBP4.02□□□□□ -1.77
PTPN13-209ENST00000511467 RIPPLY3P57055 190 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 PLP1P60201 277 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 C11orf42Q8N5U0 333 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 WNT5AP41221 380 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 FAAP20Q6NZ36 180 aa4.02□□□□□ -1.77
PTPN13-209ENST00000511467 MRPL16Q9NX20 251 aaKnown RBP4.02□□□□□ -1.77
PTPN13-209ENST00000511467 TRGV2A0A075B6R0 118 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 A4D1N5 150 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 HOXA3O43365 443 aaPredicted RBP4.01□□□□□ -1.77
PTPN13-209ENST00000511467 HERVK_113P63121 156 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 ERCC8Q13216 396 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 TMEM200BQ69YZ2 307 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 LY6G5BQ8NDX9 201 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 SHISA8B8ZZ34 492 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 TIAF1O95411 115 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 TBX6O95947 436 aaPredicted RBP4.01□□□□□ -1.77
PTPN13-209ENST00000511467 CRYBA2P53672 197 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 PSG8Q9UQ74 426 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 TRBV10-1A0A0K0K1A3 114 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 ORAOV1Q8WV07 137 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 RNF185Q96GF1 192 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 IGHV3-43A0A0B4J1X8 118 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 EPOPA6NHQ4 379 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 IGHV3-43DP0DP04 118 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 UBE2E2Q96LR5 201 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 LINC01587Q99440 93 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 MRPL20Q9BYC9 149 aaKnown RBP4.01□□□□□ -1.77
PTPN13-209ENST00000511467 IL17BQ9UHF5 180 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 CDK2AP2O75956 126 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 RPS27P42677 84 aaKnown RBP4.01□□□□□ -1.77
PTPN13-209ENST00000511467 MRGPRG-AS1Q2M3A8 158 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 C10orf126Q8N4M7 172 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 HSPB9Q9BQS6 159 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 CDKN1BP46527 198 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 ALKBH6Q3KRA9 238 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 MEIG1Q5JSS6 88 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 FZR1Q9UM11 496 aa4.01□□□□□ -1.77
PTPN13-209ENST00000511467 IGHV3OR15-7A0A075B7D8 119 aa4□□□□□ -1.77
PTPN13-209ENST00000511467 HLA-DRB4P13762 266 aa4□□□□□ -1.77
PTPN13-209ENST00000511467 CRYBB3P26998 211 aa4□□□□□ -1.77
PTPN13-209ENST00000511467 COQ2Q96H96 371 aa4□□□□□ -1.77
PTPN13-209ENST00000511467 SPAG8Q99932 426 aaPredicted RBP4□□□□□ -1.77
PTPN13-209ENST00000511467 HLA-DRB4X5D2U9 266 aa4□□□□□ -1.77
PTPN13-209ENST00000511467 PATE3B3GLJ2 98 aa4□□□□□ -1.77
PTPN13-209ENST00000511467 F8WEM9 126 aa4□□□□□ -1.77
PTPN13-209ENST00000511467 LINC01619G3V211 115 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms