RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 CDK1P06493 297 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 CTXN2P0C2S0 81 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 ZNF688P0C7X2 276 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 AKR1C4P17516 323 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 IL3RAP26951 378 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 ERP29P30040 261 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 PYCR1P32322 319 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 RCVRNP35243 200 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 POLR2IP36954 125 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 AP3S2P59780 193 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 LCN6P62502 163 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 MLLT11Q13015 90 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 C6orf99Q4VX62 202 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 ZNF684Q5T5D7 378 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 FAM222AQ5U5X8 452 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 TTC33Q6PID6 262 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 FAM19A5Q7Z5A7 132 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 CLECL1Q8IZS7 167 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 CCNYL1Q8N7R7 359 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 DTD1Q8TEA8 209 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 RTN4IP1Q8WWV3 396 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 SMIM8Q96KF7 97 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 FAM103A1Q9BTL3 118 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 FAAP24Q9BTP7 215 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 SAMD10Q9BYL1 202 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 OR51I2Q9H344 312 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 FAM206AQ9NX38 181 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 MRPS16Q9Y3D3 137 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 RFNGQ9Y644 331 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 LHFPL6Q9Y693 200 aa1.96□□□□□ -2.1
TOPBP1-208ENST00000511439 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 IGHV6-1A0A0B4J1U7 121 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 TRAV8-2A0A0B4J237 113 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 PGPA6NDG6 321 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 RBFOX3A6NFN3 312 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 A8MT66 165 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 M0R1X1 148 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 MFNGO00587 321 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 ZNF207O43670 478 aaKnown RBP1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 CHP2O43745 196 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 NOS1APO75052 506 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 PDCD6O75340 191 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 PIAS1O75925 651 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 DCTN3O75935 186 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 IGHV3-7P01780 117 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 APCSP02743 223 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 CGB3P0DN86 165 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 OR1E2P47887 323 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 LGALS7P47929 136 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 DAD1P61803 113 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 DEFA5Q01523 94 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 PMVKQ15126 192 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 PLGLAQ15195 96 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 SMUG1Q53HV7 270 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 KDM4DQ6B0I6 523 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 GPHB5Q86YW7 130 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 HS3ST5Q8IZT8 346 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 LEAP2Q969E1 77 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 REEP6Q96HR9 211 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 KCNS1Q96KK3 526 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 PACRGQ96M98 296 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 MRPL20Q9BYC9 149 aaKnown RBP1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 FGF23Q9GZV9 251 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 CHST6Q9GZX3 395 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 RERGLQ9H628 205 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 HES4Q9HCC6 221 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 MRPL27Q9P0M9 148 aaKnown RBP1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 ENOPH1Q9UHY7 261 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 ENPP4Q9Y6X5 453 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 V9GYQ6 96 aa1.95□□□□□ -2.1
TOPBP1-208ENST00000511439 IGKV1-27A0A075B6S5 117 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 TRAV26-2A0A0B4J265 109 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 A0A0D9SG52 128 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 TINCRA0A1B0GVN0 87 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 A0A1B0GXF2 115 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 FAM223BA6NKX1 122 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 KRBOX1C9JBD0 128 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 PPP5D1E7EU14 171 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 H3BQF6 201 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 AZIN1O14977 448 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 RBFOX2O43251 390 aaKnown RBP eCLIP1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 GATBO75879 557 aaKnown RBP1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 NDUFA3O95167 84 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 HLA-DQA1P01909 254 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 MYL12AP19105 171 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 IFNGR2P38484 337 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 CBX5P45973 191 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 OMPP47874 163 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 CLDN12P56749 244 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 CDK5Q00535 292 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 SPA17Q15506 151 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 Q499Y3 187 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 ACSM3Q53FZ2 586 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 MPV17L2Q567V2 206 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 OR10K2Q6IF99 312 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 FAM231DQ6ZW35 169 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 FAM223AQ8IWN6 122 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 CTAGE3PQ8IX95 158 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 OR4B1Q8NGF8 309 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 GRPEL2Q8TAA5 225 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms