RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 IGKV3-20P01619 116 aa13.3□□□□□ -0.28
PDLIM7-216ENST00000506537 CXCL2P19875 107 aa13.3□□□□□ -0.28
PDLIM7-216ENST00000506537 MUC7Q8TAX7 377 aa13.3□□□□□ -0.28
PDLIM7-216ENST00000506537 FXYD6-FXYD2A0A087WZ82 144 aa13.29□□□□□ -0.28
PDLIM7-216ENST00000506537 RNF222A6NCQ9 220 aa13.29□□□□□ -0.28
PDLIM7-216ENST00000506537 C17orf112F2Z3M2 114 aa13.29□□□□□ -0.28
PDLIM7-216ENST00000506537 FAM78BQ5VT40 261 aa13.29□□□□□ -0.28
PDLIM7-216ENST00000506537 LCN15Q6UWW0 184 aa13.29□□□□□ -0.28
PDLIM7-216ENST00000506537 MIR17HGQ75NE6 70 aa13.29□□□□□ -0.28
PDLIM7-216ENST00000506537 CSNK1G2-AS1Q8NCQ2 148 aa13.29□□□□□ -0.28
PDLIM7-216ENST00000506537 SCGB1C1Q8TD33 95 aa13.29□□□□□ -0.28
PDLIM7-216ENST00000506537 HRH4Q9H3N8 390 aa13.29□□□□□ -0.28
PDLIM7-216ENST00000506537 ZNF331Q9NQX6 463 aaPredicted RBP13.29□□□□□ -0.28
PDLIM7-216ENST00000506537 CLEC5AQ9NY25 188 aa13.29□□□□□ -0.28
PDLIM7-216ENST00000506537 A0A0J9YWU9 116 aa13.28□□□□□ -0.28
PDLIM7-216ENST00000506537 A8MTW9 85 aa13.28□□□□□ -0.28
PDLIM7-216ENST00000506537 PRB4P10163 310 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-216ENST00000506537 FFAR4Q5NUL3 377 aa13.28□□□□□ -0.28
PDLIM7-216ENST00000506537 EBLN2Q6P2I7 272 aa13.28□□□□□ -0.28
PDLIM7-216ENST00000506537 ZNF738Q8NE65 137 aa13.28□□□□□ -0.28
PDLIM7-216ENST00000506537 SAT2Q96F10 170 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-216ENST00000506537 FAM167A-AS1Q96KT0 104 aa13.28□□□□□ -0.28
PDLIM7-216ENST00000506537 CLUHP3Q96NS8 147 aa13.28□□□□□ -0.28
PDLIM7-216ENST00000506537 SLC25A2Q9BXI2 301 aa13.28□□□□□ -0.28
PDLIM7-216ENST00000506537 ZNF586Q9NXT0 402 aa13.28□□□□□ -0.28
PDLIM7-216ENST00000506537 TMEM14CQ9P0S9 112 aa13.28□□□□□ -0.28
PDLIM7-216ENST00000506537 TNFSF18Q9UNG2 199 aa13.28□□□□□ -0.28
PDLIM7-216ENST00000506537 RYR3Q15413 4870 aa13.27□□□□□ -0.28
PDLIM7-216ENST00000506537 SMLR1H3BR10 107 aa13.27□□□□□ -0.29
PDLIM7-216ENST00000506537 ZNF705DP0CH99 300 aaPredicted RBP13.27□□□□□ -0.29
PDLIM7-216ENST00000506537 ZNF705BP0CI00 300 aaPredicted RBP13.27□□□□□ -0.29
PDLIM7-216ENST00000506537 PYYP10082 97 aa13.27□□□□□ -0.29
PDLIM7-216ENST00000506537 PSG3Q16557 428 aa13.27□□□□□ -0.29
PDLIM7-216ENST00000506537 TMEM41BQ5BJD5 291 aa13.27□□□□□ -0.29
PDLIM7-216ENST00000506537 OR4B1Q8NGF8 309 aa13.27□□□□□ -0.29
PDLIM7-216ENST00000506537 OR11H2Q8NH07 326 aa13.27□□□□□ -0.29
PDLIM7-216ENST00000506537 LRRC20Q8TCA0 184 aa13.27□□□□□ -0.29
PDLIM7-216ENST00000506537 RARRES2Q99969 163 aa13.27□□□□□ -0.29
PDLIM7-216ENST00000506537 SLC50A1Q9BRV3 221 aa13.27□□□□□ -0.29
PDLIM7-216ENST00000506537 SLC35B3Q9H1N7 401 aa13.27□□□□□ -0.29
PDLIM7-216ENST00000506537 FXYD7P58549 80 aa13.26□□□□□ -0.29
PDLIM7-216ENST00000506537 AMTNQ6UX39 209 aa13.26□□□□□ -0.29
PDLIM7-216ENST00000506537 XCL2Q9UBD3 114 aa13.26□□□□□ -0.29
PDLIM7-216ENST00000506537 C3orf84H3BNL1 204 aa13.25□□□□□ -0.29
PDLIM7-216ENST00000506537 CNN1P51911 297 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-216ENST00000506537 NUTF2P61970 127 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-216ENST00000506537 MRPL32Q9BYC8 188 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-216ENST00000506537 FUT9Q9Y231 359 aa13.25□□□□□ -0.29
PDLIM7-216ENST00000506537 TRBV19A0A075B6N1 114 aa13.24□□□□□ -0.29
PDLIM7-216ENST00000506537 ZNF705FA8MVS1 300 aaPredicted RBP13.24□□□□□ -0.29
PDLIM7-216ENST00000506537 ZNF705EA8MWA4 302 aaPredicted RBP13.24□□□□□ -0.29
PDLIM7-216ENST00000506537 NDUFB4O95168 129 aa13.24□□□□□ -0.29
PDLIM7-216ENST00000506537 PSG9Q00887 426 aa13.24□□□□□ -0.29
PDLIM7-216ENST00000506537 ZNF266Q14584 549 aa13.24□□□□□ -0.29
PDLIM7-216ENST00000506537 GUK1Q16774 197 aa13.24□□□□□ -0.29
PDLIM7-216ENST00000506537 HSD17B11Q8NBQ5 300 aa13.24□□□□□ -0.29
PDLIM7-216ENST00000506537 INO80EQ8NBZ0 244 aaPredicted RBP13.24□□□□□ -0.29
PDLIM7-216ENST00000506537 RPUSD4Q96CM3 377 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-216ENST00000506537 MFFQ9GZY8 342 aa13.24□□□□□ -0.29
PDLIM7-216ENST00000506537 TIMM9Q9Y5J7 89 aa13.24□□□□□ -0.29
PDLIM7-216ENST00000506537 X6R8D5 127 aa13.24□□□□□ -0.29
PDLIM7-216ENST00000506537 DYNC2H1Q8NCM8 4307 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-216ENST00000506537 PRAC2D3DTV9 90 aa13.23□□□□□ -0.29
PDLIM7-216ENST00000506537 ZNF253O75346 499 aa13.23□□□□□ -0.29
PDLIM7-216ENST00000506537 EIF3GO75821 320 aaKnown RBP eCLIP13.23□□□□□ -0.29
PDLIM7-216ENST00000506537 HIST1H1EP10412 219 aaKnown RBP13.23□□□□□ -0.29
PDLIM7-216ENST00000506537 CASC10Q5T4H9 136 aa13.23□□□□□ -0.29
PDLIM7-216ENST00000506537 ZFAND6Q6FIF0 208 aa13.23□□□□□ -0.29
PDLIM7-216ENST00000506537 Q8NAQ8 132 aa13.23□□□□□ -0.29
PDLIM7-216ENST00000506537 OR8A1Q8NGG7 326 aa13.23□□□□□ -0.29
PDLIM7-216ENST00000506537 ZNF503Q96F45 646 aa13.23□□□□□ -0.29
PDLIM7-216ENST00000506537 C1QTNF4Q9BXJ3 329 aa13.23□□□□□ -0.29
PDLIM7-216ENST00000506537 DUSP14O95147 198 aaKnown RBP13.22□□□□□ -0.29
PDLIM7-216ENST00000506537 ATP6V0CP27449 155 aa13.22□□□□□ -0.29
PDLIM7-216ENST00000506537 RAB2AP61019 212 aa13.22□□□□□ -0.29
PDLIM7-216ENST00000506537 HIST1H1AQ02539 215 aaPredicted RBP13.22□□□□□ -0.29
PDLIM7-216ENST00000506537 RPL7L1Q6DKI1 246 aaKnown RBP13.22□□□□□ -0.29
PDLIM7-216ENST00000506537 FXYD5Q96DB9 178 aa13.22□□□□□ -0.29
PDLIM7-216ENST00000506537 C11orf68Q9H3H3 251 aaKnown RBP13.22□□□□□ -0.29
PDLIM7-216ENST00000506537 DEFB4AO15263 64 aa13.21□□□□□ -0.29
PDLIM7-216ENST00000506537 ARPC5O15511 151 aa13.21□□□□□ -0.29
PDLIM7-216ENST00000506537 OR10J4P0C629 311 aa13.21□□□□□ -0.29
PDLIM7-216ENST00000506537 PDE6HQ13956 83 aa13.21□□□□□ -0.29
PDLIM7-216ENST00000506537 OR2G3Q8NGZ4 309 aa13.21□□□□□ -0.29
PDLIM7-216ENST00000506537 IL17DQ8TAD2 202 aa13.21□□□□□ -0.29
PDLIM7-216ENST00000506537 BLNKQ8WV28 456 aa13.21□□□□□ -0.29
PDLIM7-216ENST00000506537 PAXXQ9BUH6 204 aa13.21□□□□□ -0.29
PDLIM7-216ENST00000506537 SH3BGRL3Q9H299 93 aa13.21□□□□□ -0.29
PDLIM7-216ENST00000506537 OR51M1Q9H341 326 aa13.21□□□□□ -0.29
PDLIM7-216ENST00000506537 TENM2Q9NT68 2774 aa13.2□□□□□ -0.3
PDLIM7-216ENST00000506537 LYSTQ99698 3801 aa13.2□□□□□ -0.3
PDLIM7-216ENST00000506537 IGHV4-28A0A0C4DH34 117 aa13.2□□□□□ -0.3
PDLIM7-216ENST00000506537 M6PRP20645 277 aa13.2□□□□□ -0.3
PDLIM7-216ENST00000506537 RHOBP62745 196 aa13.2□□□□□ -0.3
PDLIM7-216ENST00000506537 ACOT6Q3I5F7 207 aaPredicted RBP13.2□□□□□ -0.3
PDLIM7-216ENST00000506537 ZNF705AQ6ZN79 300 aaPredicted RBP13.2□□□□□ -0.3
PDLIM7-216ENST00000506537 OR11H4Q8NGC9 324 aa13.2□□□□□ -0.3
PDLIM7-216ENST00000506537 PSMG3Q9BT73 122 aaPredicted RBP13.2□□□□□ -0.3
PDLIM7-216ENST00000506537 PLECQ15149 4684 aaKnown RBP13.2□□□□□ -0.3
PDLIM7-216ENST00000506537 M0R2Z0 102 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms