RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 DSCAML1Q8TD84 2053 aa12.66□□□□□ -0.38
SCLT1-208ENST00000506368 CGB1A6NKQ9 187 aa12.65□□□□□ -0.38
SCLT1-208ENST00000506368 GTSF1LQ9H1H1 148 aa12.65□□□□□ -0.38
SCLT1-208ENST00000506368 SPENQ96T58 3664 aaKnown RBP12.65□□□□□ -0.39
SCLT1-208ENST00000506368 IGHV1-18A0A0C4DH31 117 aa12.65□□□□□ -0.39
SCLT1-208ENST00000506368 SERTM2A0A1B0GWG4 89 aa12.65□□□□□ -0.39
SCLT1-208ENST00000506368 LINC01546A6NGU7 62 aa12.65□□□□□ -0.39
SCLT1-208ENST00000506368 CCL11P51671 97 aa12.65□□□□□ -0.39
SCLT1-208ENST00000506368 SCGB2A2Q13296 93 aa12.65□□□□□ -0.39
SCLT1-208ENST00000506368 BCL6BQ8N143 479 aaPredicted RBP12.65□□□□□ -0.39
SCLT1-208ENST00000506368 TMEM178AQ8NBL3 297 aa12.65□□□□□ -0.39
SCLT1-208ENST00000506368 ZNF502Q8TBZ5 544 aa12.65□□□□□ -0.39
SCLT1-208ENST00000506368 FER1L6-AS2Q96M78 137 aa12.65□□□□□ -0.39
SCLT1-208ENST00000506368 MRPL20Q9BYC9 149 aaKnown RBP12.65□□□□□ -0.39
SCLT1-208ENST00000506368 SLC25A39Q9BZJ4 359 aaPredicted RBP12.65□□□□□ -0.39
SCLT1-208ENST00000506368 SPANXB1Q9NS25 103 aaPredicted RBP12.65□□□□□ -0.39
SCLT1-208ENST00000506368 ITPR1Q14643 2758 aa12.64□□□□□ -0.39
SCLT1-208ENST00000506368 D6R8Y8 96 aa12.64□□□□□ -0.39
SCLT1-208ENST00000506368 E9PLD3 99 aa12.64□□□□□ -0.39
SCLT1-208ENST00000506368 SMAGPQ0VAQ4 97 aa12.64□□□□□ -0.39
SCLT1-208ENST00000506368 PRR31Q5SQ13 230 aa12.64□□□□□ -0.39
SCLT1-208ENST00000506368 ZNF788Q6ZQV5 615 aa12.64□□□□□ -0.39
SCLT1-208ENST00000506368 GOLT1AQ6ZVE7 132 aa12.64□□□□□ -0.39
SCLT1-208ENST00000506368 ZMAT4Q9H898 229 aa12.64□□□□□ -0.39
SCLT1-208ENST00000506368 GCSHP23434 173 aa12.63□□□□□ -0.39
SCLT1-208ENST00000506368 PHLDA1Q8WV24 401 aaPredicted RBP12.63□□□□□ -0.39
SCLT1-208ENST00000506368 RITA1Q96K30 269 aa12.63□□□□□ -0.39
SCLT1-208ENST00000506368 GAFA1Q96PS6 74 aa12.63□□□□□ -0.39
SCLT1-208ENST00000506368 NAA38Q9BRA0 125 aaKnown RBP12.63□□□□□ -0.39
SCLT1-208ENST00000506368 MRPL36Q9P0J6 103 aaKnown RBP12.63□□□□□ -0.39
SCLT1-208ENST00000506368 TSSC4Q9Y5U2 329 aaPredicted RBP12.63□□□□□ -0.39
SCLT1-208ENST00000506368 A0A1W2PRD5 423 aa12.63□□□□□ -0.39
SCLT1-208ENST00000506368 A0A1W2PRF3 423 aa12.63□□□□□ -0.39
SCLT1-208ENST00000506368 A0A1W2PRM7 423 aa12.63□□□□□ -0.39
SCLT1-208ENST00000506368 E7EUB6 86 aa12.63□□□□□ -0.39
SCLT1-208ENST00000506368 EVI2AP22794 236 aa12.63□□□□□ -0.39
SCLT1-208ENST00000506368 FCGR2BP31994 310 aaPredicted RBP12.63□□□□□ -0.39
SCLT1-208ENST00000506368 MC5RP33032 325 aa12.63□□□□□ -0.39
SCLT1-208ENST00000506368 C3orf36Q3SXR2 165 aa12.63□□□□□ -0.39
SCLT1-208ENST00000506368 Q6ZS92 163 aa12.63□□□□□ -0.39
SCLT1-208ENST00000506368 PCP2Q8IVA1 136 aa12.63□□□□□ -0.39
SCLT1-208ENST00000506368 LINC00311Q8N616 119 aa12.63□□□□□ -0.39
SCLT1-208ENST00000506368 CHAC1Q9BUX1 264 aa12.63□□□□□ -0.39
SCLT1-208ENST00000506368 BSNQ9UPA5 3926 aa12.62□□□□□ -0.39
SCLT1-208ENST00000506368 USP24Q9UPU5 2620 aa12.62□□□□□ -0.39
SCLT1-208ENST00000506368 NDUFS7O75251 213 aa12.62□□□□□ -0.39
SCLT1-208ENST00000506368 S100A7AQ86SG5 101 aa12.62□□□□□ -0.39
SCLT1-208ENST00000506368 PSG8Q9UQ74 426 aa12.62□□□□□ -0.39
SCLT1-208ENST00000506368 A0A1W2PPI3 338 aa12.61□□□□□ -0.39
SCLT1-208ENST00000506368 GLRXP35754 106 aa12.61□□□□□ -0.39
SCLT1-208ENST00000506368 CEND1Q8N111 149 aa12.61□□□□□ -0.39
SCLT1-208ENST00000506368 RND1Q92730 232 aa12.61□□□□□ -0.39
SCLT1-208ENST00000506368 MRAP2Q96G30 205 aa12.61□□□□□ -0.39
SCLT1-208ENST00000506368 TRAV8-1A0A0A6YYK1 113 aa12.61□□□□□ -0.39
SCLT1-208ENST00000506368 K7EM74 188 aa12.61□□□□□ -0.39
SCLT1-208ENST00000506368 IGLV2-23P01705 113 aa12.61□□□□□ -0.39
SCLT1-208ENST00000506368 IGHG3P01860 377 aa12.61□□□□□ -0.39
SCLT1-208ENST00000506368 PLGLAQ15195 96 aa12.61□□□□□ -0.39
SCLT1-208ENST00000506368 DEFB109BQ30KR1 87 aa12.61□□□□□ -0.39
SCLT1-208ENST00000506368 ZNF71Q9NQZ8 489 aaPredicted RBP12.61□□□□□ -0.39
SCLT1-208ENST00000506368 PKD1L2Q7Z442 2459 aa12.6□□□□□ -0.39
SCLT1-208ENST00000506368 ATP5LO75964 103 aa12.6□□□□□ -0.39
SCLT1-208ENST00000506368 FXYD2P54710 66 aa12.6□□□□□ -0.39
SCLT1-208ENST00000506368 LOXL1Q08397 574 aaPredicted RBP12.6□□□□□ -0.39
SCLT1-208ENST00000506368 TEX36Q5VZQ5 186 aa12.6□□□□□ -0.39
SCLT1-208ENST00000506368 LCNL1Q6ZST4 164 aa12.6□□□□□ -0.39
SCLT1-208ENST00000506368 COX8CQ7Z4L0 72 aa12.6□□□□□ -0.39
SCLT1-208ENST00000506368 CNEP1R1Q8N9A8 125 aa12.6□□□□□ -0.39
SCLT1-208ENST00000506368 DOCK7Q96N67 2140 aa12.6□□□□□ -0.39
SCLT1-208ENST00000506368 IGLV3-9A0A075B6K5 115 aa12.6□□□□□ -0.39
SCLT1-208ENST00000506368 ZNF785A8K8V0 405 aa12.6□□□□□ -0.39
SCLT1-208ENST00000506368 FAM106CPP0CH98 169 aa12.6□□□□□ -0.39
SCLT1-208ENST00000506368 TNFRSF1AP19438 455 aa12.6□□□□□ -0.39
SCLT1-208ENST00000506368 CKS1BP61024 79 aa12.6□□□□□ -0.39
SCLT1-208ENST00000506368 FAM106AQ4KMX7 169 aa12.6□□□□□ -0.39
SCLT1-208ENST00000506368 PIEZO2Q9H5I5 2752 aa12.59□□□□□ -0.39
SCLT1-208ENST00000506368 TRBV19A0A075B6N1 114 aa12.59□□□□□ -0.39
SCLT1-208ENST00000506368 LOC389332A0A1B0GUA5 103 aa12.59□□□□□ -0.39
SCLT1-208ENST00000506368 LINC01619G3V211 115 aa12.59□□□□□ -0.39
SCLT1-208ENST00000506368 MRPL51Q4U2R6 128 aaKnown RBP12.59□□□□□ -0.39
SCLT1-208ENST00000506368 ATP6V0E2Q8NHE4 81 aa12.59□□□□□ -0.39
SCLT1-208ENST00000506368 NGBQ9NPG2 151 aa12.59□□□□□ -0.39
SCLT1-208ENST00000506368 CACNA1GO43497 2377 aa12.59□□□□□ -0.39
SCLT1-208ENST00000506368 RAB9AP51151 201 aa12.58□□□□□ -0.39
SCLT1-208ENST00000506368 ZNF479Q96JC4 524 aa12.58□□□□□ -0.39
SCLT1-208ENST00000506368 MAP1LC3AQ9H492 121 aa12.58□□□□□ -0.39
SCLT1-208ENST00000506368 NXT2Q9NPJ8 142 aaKnown RBP12.58□□□□□ -0.39
SCLT1-208ENST00000506368 IGLL5B9A064 214 aa12.58□□□□□ -0.4
SCLT1-208ENST00000506368 K7ENP7 123 aa12.58□□□□□ -0.4
SCLT1-208ENST00000506368 IGKCP01834 107 aa12.58□□□□□ -0.4
SCLT1-208ENST00000506368 CKS2P33552 79 aa12.58□□□□□ -0.4
SCLT1-208ENST00000506368 SRSF2Q01130 221 aaKnown RBP12.58□□□□□ -0.4
SCLT1-208ENST00000506368 PDE6HQ13956 83 aa12.58□□□□□ -0.4
SCLT1-208ENST00000506368 TWIST1Q15672 202 aa12.58□□□□□ -0.4
SCLT1-208ENST00000506368 KLF17Q5JT82 389 aaPredicted RBP12.58□□□□□ -0.4
SCLT1-208ENST00000506368 CCDC144NLQ6NUI1 221 aa12.58□□□□□ -0.4
SCLT1-208ENST00000506368 ZNF562Q6V9R5 426 aa12.58□□□□□ -0.4
SCLT1-208ENST00000506368 HHLA3Q9XRX5 114 aa12.58□□□□□ -0.4
SCLT1-208ENST00000506368 SLC25A15Q9Y619 301 aa12.58□□□□□ -0.4
SCLT1-208ENST00000506368 F11RQ9Y624 299 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms