RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 IGLV5-52A0A0A0MRZ9 124 aa10.54□□□□□ -0.72
HDAC6-236ENST00000498808 A0A0B4J2A0 478 aa10.54□□□□□ -0.72
HDAC6-236ENST00000498808 PRSS46E5RG02 174 aa10.54□□□□□ -0.72
HDAC6-236ENST00000498808 IAPPP10997 89 aa10.54□□□□□ -0.72
HDAC6-236ENST00000498808 RPL7P18124 248 aaKnown RBP10.54□□□□□ -0.72
HDAC6-236ENST00000498808 RAB11AP62491 216 aa10.54□□□□□ -0.72
HDAC6-236ENST00000498808 OR1S1Q8NH92 325 aa10.54□□□□□ -0.72
HDAC6-236ENST00000498808 MSRB1Q9NZV6 116 aa10.54□□□□□ -0.72
HDAC6-236ENST00000498808 SHPKQ9UHJ6 478 aa10.54□□□□□ -0.72
HDAC6-236ENST00000498808 PAIP2BQ9ULR5 123 aaKnown RBP10.54□□□□□ -0.72
HDAC6-236ENST00000498808 FAT3Q8TDW7 4589 aa10.53□□□□□ -0.72
HDAC6-236ENST00000498808 FAM25AB3EWG3 89 aa10.53□□□□□ -0.72
HDAC6-236ENST00000498808 FAM25CB3EWG5 89 aa10.53□□□□□ -0.72
HDAC6-236ENST00000498808 FAM25GB3EWG6 89 aa10.53□□□□□ -0.72
HDAC6-236ENST00000498808 LINC00467Q9BRT7 94 aa10.53□□□□□ -0.72
HDAC6-236ENST00000498808 ICOSQ9Y6W8 199 aa10.53□□□□□ -0.72
HDAC6-236ENST00000498808 TRGV2A0A075B6R0 118 aa10.52□□□□□ -0.73
HDAC6-236ENST00000498808 PLA2G1BP04054 148 aaKnown RBP10.52□□□□□ -0.73
HDAC6-236ENST00000498808 S100A7P31151 101 aa10.52□□□□□ -0.73
HDAC6-236ENST00000498808 NCS1P62166 190 aa10.52□□□□□ -0.73
HDAC6-236ENST00000498808 LYPD5Q6UWN5 251 aa10.52□□□□□ -0.73
HDAC6-236ENST00000498808 DEFB104AQ8WTQ1 72 aa10.52□□□□□ -0.73
HDAC6-236ENST00000498808 PLA2G2DQ9UNK4 145 aa10.52□□□□□ -0.73
HDAC6-236ENST00000498808 LY96Q9Y6Y9 160 aa10.52□□□□□ -0.73
HDAC6-236ENST00000498808 TRAV9-2A0A087WT02 112 aa10.51□□□□□ -0.73
HDAC6-236ENST00000498808 NPIPB6E9PJ23 425 aa10.51□□□□□ -0.73
HDAC6-236ENST00000498808 PITX3O75364 302 aa10.51□□□□□ -0.73
HDAC6-236ENST00000498808 CCDC190Q86UF4 302 aa10.51□□□□□ -0.73
HDAC6-236ENST00000498808 LRRC20Q8TCA0 184 aa10.51□□□□□ -0.73
HDAC6-236ENST00000498808 EXTL2Q9UBQ6 330 aa10.51□□□□□ -0.73
HDAC6-236ENST00000498808 HIGD1AQ9Y241 93 aa10.51□□□□□ -0.73
HDAC6-236ENST00000498808 KCNIP3Q9Y2W7 256 aa10.51□□□□□ -0.73
HDAC6-236ENST00000498808 LRCOL1A6NCL2 159 aa10.5□□□□□ -0.73
HDAC6-236ENST00000498808 PRAC2D3DTV9 90 aa10.5□□□□□ -0.73
HDAC6-236ENST00000498808 J3KRW8 73 aa10.5□□□□□ -0.73
HDAC6-236ENST00000498808 MRPS12O15235 138 aaKnown RBP10.5□□□□□ -0.73
HDAC6-236ENST00000498808 PAX4O43316 350 aa10.5□□□□□ -0.73
HDAC6-236ENST00000498808 ZNF324O75467 553 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-236ENST00000498808 AKR1C4P17516 323 aa10.5□□□□□ -0.73
HDAC6-236ENST00000498808 RAP2BP61225 183 aa10.5□□□□□ -0.73
HDAC6-236ENST00000498808 WFDC10BQ8IUB3 73 aa10.5□□□□□ -0.73
HDAC6-236ENST00000498808 C11orf72Q8NBR9 251 aa10.5□□□□□ -0.73
HDAC6-236ENST00000498808 NTN5Q8WTR8 489 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-236ENST00000498808 Q9H521 79 aa10.5□□□□□ -0.73
HDAC6-236ENST00000498808 GSN-AS1Q9NRJ2 163 aa10.5□□□□□ -0.73
HDAC6-236ENST00000498808 FUT9Q9Y231 359 aa10.5□□□□□ -0.73
HDAC6-236ENST00000498808 TRAV12-3A0A0B4J271 114 aa10.49□□□□□ -0.73
HDAC6-236ENST00000498808 DISC1C4P0D8 188 aa10.49□□□□□ -0.73
HDAC6-236ENST00000498808 AKR1C1Q04828 323 aa10.49□□□□□ -0.73
HDAC6-236ENST00000498808 CYP2G1PQ6ZSU1 146 aa10.49□□□□□ -0.73
HDAC6-236ENST00000498808 LINC00528Q8N1L1 170 aa10.49□□□□□ -0.73
HDAC6-236ENST00000498808 PYGO2Q9BRQ0 406 aa10.49□□□□□ -0.73
HDAC6-236ENST00000498808 ZNF331Q9NQX6 463 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-236ENST00000498808 TRGV1A0A0A0MS02 117 aa10.48□□□□□ -0.73
HDAC6-236ENST00000498808 LINC00854A0A1B0GVQ3 168 aa10.48□□□□□ -0.73
HDAC6-236ENST00000498808 PMS2P5A8MQ11 134 aa10.48□□□□□ -0.73
HDAC6-236ENST00000498808 HYPMO75409 117 aa10.48□□□□□ -0.73
HDAC6-236ENST00000498808 SNRPCP09234 159 aaKnown RBP10.48□□□□□ -0.73
HDAC6-236ENST00000498808 PLP1P60201 277 aa10.48□□□□□ -0.73
HDAC6-236ENST00000498808 VBP1P61758 197 aa10.48□□□□□ -0.73
HDAC6-236ENST00000498808 ACOT7LQ6ZUV0 252 aa10.48□□□□□ -0.73
HDAC6-236ENST00000498808 ZNF431Q8TF32 576 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-236ENST00000498808 K7EP13 123 aa10.47□□□□□ -0.73
HDAC6-236ENST00000498808 IGHV3-53P01767 116 aa10.47□□□□□ -0.73
HDAC6-236ENST00000498808 IL5P05113 134 aa10.47□□□□□ -0.73
HDAC6-236ENST00000498808 OR5G3P0C626 314 aa10.47□□□□□ -0.73
HDAC6-236ENST00000498808 LINC00869P0C866 280 aa10.47□□□□□ -0.73
HDAC6-236ENST00000498808 ZBTB8BQ8NAP8 495 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-236ENST00000498808 OR51S1Q8NGJ8 323 aa10.47□□□□□ -0.73
HDAC6-236ENST00000498808 PRO0255Q9UI72 69 aa10.47□□□□□ -0.73
HDAC6-236ENST00000498808 SPINK4O60575 86 aa10.46□□□□□ -0.73
HDAC6-236ENST00000498808 C1QBP02746 253 aa10.46□□□□□ -0.73
HDAC6-236ENST00000498808 CT45A10P0DMU9 189 aa10.46□□□□□ -0.73
HDAC6-236ENST00000498808 CXCL2P19875 107 aa10.46□□□□□ -0.73
HDAC6-236ENST00000498808 EVI2AP22794 236 aa10.46□□□□□ -0.73
HDAC6-236ENST00000498808 CRYBA4P53673 196 aa10.46□□□□□ -0.73
HDAC6-236ENST00000498808 SSBP1Q04837 148 aaKnown RBP10.46□□□□□ -0.73
HDAC6-236ENST00000498808 MRPL23Q16540 153 aaKnown RBP10.46□□□□□ -0.73
HDAC6-236ENST00000498808 MZT2AQ6P582 158 aa10.46□□□□□ -0.73
HDAC6-236ENST00000498808 LCN15Q6UWW0 184 aa10.46□□□□□ -0.73
HDAC6-236ENST00000498808 PATE2Q6UY27 113 aa10.46□□□□□ -0.73
HDAC6-236ENST00000498808 NEGR1Q7Z3B1 354 aa10.46□□□□□ -0.73
HDAC6-236ENST00000498808 ST6GAL2Q96JF0 529 aa10.46□□□□□ -0.73
HDAC6-236ENST00000498808 SLC50A1Q9BRV3 221 aa10.46□□□□□ -0.73
HDAC6-236ENST00000498808 KLF12Q9Y4X4 402 aa10.46□□□□□ -0.73
HDAC6-236ENST00000498808 WRBO00258 174 aa10.45□□□□□ -0.74
HDAC6-236ENST00000498808 SLC17A3O00476 420 aa10.45□□□□□ -0.74
HDAC6-236ENST00000498808 PRAF2O60831 178 aa10.45□□□□□ -0.74
HDAC6-236ENST00000498808 AKAIN1P0CW23 69 aa10.45□□□□□ -0.74
HDAC6-236ENST00000498808 TEPPQ6URK8 271 aa10.45□□□□□ -0.74
HDAC6-236ENST00000498808 Q8N814 137 aa10.45□□□□□ -0.74
HDAC6-236ENST00000498808 ZNF680Q8NEM1 530 aa10.45□□□□□ -0.74
HDAC6-236ENST00000498808 C15orf40Q8WUR7 153 aa10.45□□□□□ -0.74
HDAC6-236ENST00000498808 CIB3Q96Q77 187 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-236ENST00000498808 PRRT1Q99946 306 aa10.45□□□□□ -0.74
HDAC6-236ENST00000498808 H3BP45 60 aa10.44□□□□□ -0.74
HDAC6-236ENST00000498808 CRYGDP07320 174 aa10.44□□□□□ -0.74
HDAC6-236ENST00000498808 ANXA7P20073 488 aaKnown RBP10.44□□□□□ -0.74
HDAC6-236ENST00000498808 LEPP41159 167 aa10.44□□□□□ -0.74
HDAC6-236ENST00000498808 RPP30P78346 268 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms