RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 CSNK1G2-AS1Q8NCQ2 148 aa12.14□□□□□ -0.47
ABCF3-218ENST00000498136 CHAC2Q8WUX2 184 aa12.14□□□□□ -0.47
ABCF3-218ENST00000498136 ATP5SQ99766 215 aa12.14□□□□□ -0.47
ABCF3-218ENST00000498136 SLC35B3Q9H1N7 401 aa12.14□□□□□ -0.47
ABCF3-218ENST00000498136 HSPB11Q9Y547 144 aa12.14□□□□□ -0.47
ABCF3-218ENST00000498136 IGHV3OR16-12A0A075B7B8 117 aa12.13□□□□□ -0.47
ABCF3-218ENST00000498136 IGHV4-28A0A0C4DH34 117 aa12.13□□□□□ -0.47
ABCF3-218ENST00000498136 ZNF705EA8MWA4 302 aaPredicted RBP12.13□□□□□ -0.47
ABCF3-218ENST00000498136 H3BTX0 84 aa12.13□□□□□ -0.47
ABCF3-218ENST00000498136 DUSP14O95147 198 aaKnown RBP12.13□□□□□ -0.47
ABCF3-218ENST00000498136 ZNF705DP0CH99 300 aaPredicted RBP12.13□□□□□ -0.47
ABCF3-218ENST00000498136 ZNF705BP0CI00 300 aaPredicted RBP12.13□□□□□ -0.47
ABCF3-218ENST00000498136 CXCL2P19875 107 aa12.13□□□□□ -0.47
ABCF3-218ENST00000498136 FCN2Q15485 313 aa12.13□□□□□ -0.47
ABCF3-218ENST00000498136 PSG3Q16557 428 aa12.13□□□□□ -0.47
ABCF3-218ENST00000498136 RGS21Q2M5E4 152 aa12.13□□□□□ -0.47
ABCF3-218ENST00000498136 Q8NAQ8 132 aa12.13□□□□□ -0.47
ABCF3-218ENST00000498136 C11orf45Q8TAV5 145 aa12.13□□□□□ -0.47
ABCF3-218ENST00000498136 SLC50A1Q9BRV3 221 aa12.13□□□□□ -0.47
ABCF3-218ENST00000498136 SMIM3Q9BZL3 60 aa12.13□□□□□ -0.47
ABCF3-218ENST00000498136 WDR61Q9GZS3 305 aaKnown RBP12.13□□□□□ -0.47
ABCF3-218ENST00000498136 MFFQ9GZY8 342 aa12.13□□□□□ -0.47
ABCF3-218ENST00000498136 C17orf112F2Z3M2 114 aa12.12□□□□□ -0.47
ABCF3-218ENST00000498136 CLUHP3Q96NS8 147 aa12.12□□□□□ -0.47
ABCF3-218ENST00000498136 KCNIP2Q9NS61 270 aa12.12□□□□□ -0.47
ABCF3-218ENST00000498136 X6R8D5 127 aa12.12□□□□□ -0.47
ABCF3-218ENST00000498136 KMT2CQ8NEZ4 4911 aaKnown RBP12.11□□□□□ -0.47
ABCF3-218ENST00000498136 NUPR2A6NF83 97 aa12.11□□□□□ -0.47
ABCF3-218ENST00000498136 IFNA5P01569 189 aa12.11□□□□□ -0.47
ABCF3-218ENST00000498136 PRB4P10163 310 aaPredicted RBP12.11□□□□□ -0.47
ABCF3-218ENST00000498136 CNN1P51911 297 aaKnown RBP12.11□□□□□ -0.47
ABCF3-218ENST00000498136 NANOS2P60321 138 aaKnown RBP12.11□□□□□ -0.47
ABCF3-218ENST00000498136 HIST1H1AQ02539 215 aaPredicted RBP12.11□□□□□ -0.47
ABCF3-218ENST00000498136 GCSAMLQ5JQS6 135 aa12.11□□□□□ -0.47
ABCF3-218ENST00000498136 OR11H7Q8NGC8 314 aa12.11□□□□□ -0.47
ABCF3-218ENST00000498136 ZNF331Q9NQX6 463 aaPredicted RBP12.11□□□□□ -0.47
ABCF3-218ENST00000498136 PPP1R14DQ9NXH3 145 aa12.11□□□□□ -0.47
ABCF3-218ENST00000498136 STARD9Q9P2P6 4700 aa12.11□□□□□ -0.47
ABCF3-218ENST00000498136 RBMY1A1P0DJD3 496 aaKnown RBP12.1□□□□□ -0.47
ABCF3-218ENST00000498136 RBMY1CP0DJD4 496 aa12.1□□□□□ -0.47
ABCF3-218ENST00000498136 RHOBP62745 196 aa12.1□□□□□ -0.47
ABCF3-218ENST00000498136 RBMY1FQ15415 496 aaKnown RBP12.1□□□□□ -0.47
ABCF3-218ENST00000498136 SCGB1C1Q8TD33 95 aa12.1□□□□□ -0.47
ABCF3-218ENST00000498136 RPUSD4Q96CM3 377 aaKnown RBP12.1□□□□□ -0.47
ABCF3-218ENST00000498136 HRH4Q9H3N8 390 aa12.1□□□□□ -0.47
ABCF3-218ENST00000498136 H3BQ15 152 aa12.09□□□□□ -0.47
ABCF3-218ENST00000498136 SLC17A3O00476 420 aa12.09□□□□□ -0.47
ABCF3-218ENST00000498136 IGLC2P0DOY2 106 aa12.09□□□□□ -0.47
ABCF3-218ENST00000498136 GUK1Q16774 197 aa12.09□□□□□ -0.47
ABCF3-218ENST00000498136 OR8A1Q8NGG7 326 aa12.09□□□□□ -0.47
ABCF3-218ENST00000498136 PHLDA1Q8WV24 401 aaPredicted RBP12.09□□□□□ -0.47
ABCF3-218ENST00000498136 GOLT1BQ9Y3E0 138 aa12.09□□□□□ -0.47
ABCF3-218ENST00000498136 M0R2Z0 102 aa12.08□□□□□ -0.48
ABCF3-218ENST00000498136 JTBO76095 146 aa12.08□□□□□ -0.48
ABCF3-218ENST00000498136 SPINK13Q1W4C9 94 aa12.08□□□□□ -0.48
ABCF3-218ENST00000498136 CEMP1Q6PRD7 247 aaPredicted RBP12.08□□□□□ -0.48
ABCF3-218ENST00000498136 TMEM208Q9BTX3 173 aa12.08□□□□□ -0.48
ABCF3-218ENST00000498136 KLK5Q9Y337 293 aaPredicted RBP12.08□□□□□ -0.48
ABCF3-218ENST00000498136 LCE6AA0A183 80 aa12.07□□□□□ -0.48
ABCF3-218ENST00000498136 A8MTW9 85 aa12.07□□□□□ -0.48
ABCF3-218ENST00000498136 ZNF705FA8MVS1 300 aaPredicted RBP12.07□□□□□ -0.48
ABCF3-218ENST00000498136 AMBPP02760 352 aa12.07□□□□□ -0.48
ABCF3-218ENST00000498136 PYYP10082 97 aa12.07□□□□□ -0.48
ABCF3-218ENST00000498136 FFAR4Q5NUL3 377 aa12.07□□□□□ -0.48
ABCF3-218ENST00000498136 AMTNQ6UX39 209 aa12.07□□□□□ -0.48
ABCF3-218ENST00000498136 ZNF705AQ6ZN79 300 aaPredicted RBP12.07□□□□□ -0.48
ABCF3-218ENST00000498136 BLNKQ8WV28 456 aa12.07□□□□□ -0.48
ABCF3-218ENST00000498136 SAT2Q96F10 170 aaPredicted RBP12.07□□□□□ -0.48
ABCF3-218ENST00000498136 TENM2Q9NT68 2774 aa12.07□□□□□ -0.48
ABCF3-218ENST00000498136 ZNF586Q9NXT0 402 aa12.07□□□□□ -0.48
ABCF3-218ENST00000498136 TIMM9Q9Y5J7 89 aa12.07□□□□□ -0.48
ABCF3-218ENST00000498136 BOLA2-SMG1P6H3BVE0 249 aa12.06□□□□□ -0.48
ABCF3-218ENST00000498136 GIPP09681 153 aaPredicted RBP12.06□□□□□ -0.48
ABCF3-218ENST00000498136 HIST1H1EP10412 219 aaKnown RBP12.06□□□□□ -0.48
ABCF3-218ENST00000498136 MIR17HGQ75NE6 70 aa12.06□□□□□ -0.48
ABCF3-218ENST00000498136 OR10J6PQ8NGY7 276 aa12.06□□□□□ -0.48
ABCF3-218ENST00000498136 IGF2BP2-AS1Q96M15 143 aa12.06□□□□□ -0.48
ABCF3-218ENST00000498136 NEU1Q99519 415 aa12.06□□□□□ -0.48
ABCF3-218ENST00000498136 SLC25A2Q9BXI2 301 aa12.06□□□□□ -0.48
ABCF3-218ENST00000498136 MRPL32Q9BYC8 188 aaKnown RBP12.06□□□□□ -0.48
ABCF3-218ENST00000498136 TMEM14CQ9P0S9 112 aa12.06□□□□□ -0.48
ABCF3-218ENST00000498136 TRBV19A0A075B6N1 114 aa12.05□□□□□ -0.48
ABCF3-218ENST00000498136 SMIM9A6NGZ8 99 aa12.05□□□□□ -0.48
ABCF3-218ENST00000498136 INSP01308 110 aa12.05□□□□□ -0.48
ABCF3-218ENST00000498136 HBE1P02100 147 aa12.05□□□□□ -0.48
ABCF3-218ENST00000498136 EMP1P54849 157 aa12.05□□□□□ -0.48
ABCF3-218ENST00000498136 BAP18Q8IXM2 172 aa12.05□□□□□ -0.48
ABCF3-218ENST00000498136 C1orf158Q8N1D5 194 aa12.05□□□□□ -0.48
ABCF3-218ENST00000498136 WFDC1Q9HC57 220 aa12.05□□□□□ -0.48
ABCF3-218ENST00000498136 RFNGQ9Y644 331 aa12.05□□□□□ -0.48
ABCF3-218ENST00000498136 TRAV12-2A0A075B6T6 113 aa12.04□□□□□ -0.48
ABCF3-218ENST00000498136 ZNF253O75346 499 aa12.04□□□□□ -0.48
ABCF3-218ENST00000498136 OXA1LQ15070 435 aa12.04□□□□□ -0.48
ABCF3-218ENST00000498136 ASB13Q8WXK3 278 aa12.04□□□□□ -0.48
ABCF3-218ENST00000498136 PAXXQ9BUH6 204 aa12.04□□□□□ -0.48
ABCF3-218ENST00000498136 PARD6GQ9BYG4 376 aaPredicted RBP12.04□□□□□ -0.48
ABCF3-218ENST00000498136 OR51M1Q9H341 326 aa12.04□□□□□ -0.48
ABCF3-218ENST00000498136 FUT9Q9Y231 359 aa12.04□□□□□ -0.48
ABCF3-218ENST00000498136 TMEM189A5PLL7 270 aa12.03□□□□□ -0.48
ABCF3-218ENST00000498136 PRAC2D3DTV9 90 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms