RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 RCHY1Q96PM5 261 aa14.28□□□□□ -0.12
HDAC4-212ENST00000495497 MRPL32Q9BYC8 188 aaKnown RBP14.28□□□□□ -0.12
HDAC4-212ENST00000495497 CSTL1Q9H114 145 aa14.28□□□□□ -0.12
HDAC4-212ENST00000495497 U3KQK5 164 aa14.28□□□□□ -0.12
HDAC4-212ENST00000495497 KIR2DL5BA0A0G2JN68 375 aa14.27□□□□□ -0.13
HDAC4-212ENST00000495497 KIR2DL5BA0A0G2JPC4 375 aa14.27□□□□□ -0.13
HDAC4-212ENST00000495497 ACOT6Q3I5F7 207 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-212ENST00000495497 LCN15Q6UWW0 184 aa14.27□□□□□ -0.13
HDAC4-212ENST00000495497 KIR2DL5AQ8N109 375 aa14.27□□□□□ -0.13
HDAC4-212ENST00000495497 KCNRGQ8N5I3 272 aa14.27□□□□□ -0.13
HDAC4-212ENST00000495497 KIR2DL5BQ8NHK3 375 aa14.27□□□□□ -0.13
HDAC4-212ENST00000495497 HRH4Q9H3N8 390 aa14.27□□□□□ -0.13
HDAC4-212ENST00000495497 SAV1Q9H4B6 383 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-212ENST00000495497 RPRMQ9NS64 109 aa14.27□□□□□ -0.13
HDAC4-212ENST00000495497 TMEM14CQ9P0S9 112 aa14.27□□□□□ -0.13
HDAC4-212ENST00000495497 H3BMM0 161 aa14.26□□□□□ -0.13
HDAC4-212ENST00000495497 IGKV3-20P01619 116 aa14.26□□□□□ -0.13
HDAC4-212ENST00000495497 M6PRP20645 277 aa14.26□□□□□ -0.13
HDAC4-212ENST00000495497 DEFB135Q30KP9 77 aa14.26□□□□□ -0.13
HDAC4-212ENST00000495497 FAM122CQ6P4D5 195 aa14.26□□□□□ -0.13
HDAC4-212ENST00000495497 FOXI2Q6ZQN5 318 aa14.26□□□□□ -0.13
HDAC4-212ENST00000495497 TCTE3Q8IZS6 198 aa14.26□□□□□ -0.13
HDAC4-212ENST00000495497 SAT2Q96F10 170 aaPredicted RBP14.26□□□□□ -0.13
HDAC4-212ENST00000495497 PSMG3Q9BT73 122 aaPredicted RBP14.26□□□□□ -0.13
HDAC4-212ENST00000495497 ZNF331Q9NQX6 463 aaPredicted RBP14.26□□□□□ -0.13
HDAC4-212ENST00000495497 TAAR5O14804 337 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 CA1P00915 261 aaPredicted RBP14.25□□□□□ -0.13
HDAC4-212ENST00000495497 HLA-DRB4P13762 266 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 RHOBP62745 196 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 CD300CQ08708 224 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 ZNF345Q14585 488 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 PSG3Q16557 428 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 ZNF738Q8NE65 137 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 OR10G4Q8NGN3 311 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 OR10G9Q8NGN4 311 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 OR10G7Q8NGN6 311 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 OR2G3Q8NGZ4 309 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 BLNKQ8WV28 456 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 ZNF503Q96F45 646 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 ARPC5LQ9BPX5 153 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 OVOL2Q9BRP0 275 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 OR51M1Q9H341 326 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 HLA-DRB4X5D2U9 266 aa14.25□□□□□ -0.13
HDAC4-212ENST00000495497 AGRNO00468 2067 aa14.24□□□□□ -0.13
HDAC4-212ENST00000495497 A0A0J9YX75 114 aa14.24□□□□□ -0.13
HDAC4-212ENST00000495497 ZNF705FA8MVS1 300 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-212ENST00000495497 UBE2CO00762 179 aa14.24□□□□□ -0.13
HDAC4-212ENST00000495497 JTBO76095 146 aa14.24□□□□□ -0.13
HDAC4-212ENST00000495497 OR10J4P0C629 311 aa14.24□□□□□ -0.13
HDAC4-212ENST00000495497 ZNF705DP0CH99 300 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-212ENST00000495497 ZNF705BP0CI00 300 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-212ENST00000495497 HIST1H1EP10412 219 aaKnown RBP14.24□□□□□ -0.13
HDAC4-212ENST00000495497 C4BPBP20851 252 aa14.24□□□□□ -0.13
HDAC4-212ENST00000495497 EBLN2Q6P2I7 272 aa14.24□□□□□ -0.13
HDAC4-212ENST00000495497 AKAP14Q86UN6 197 aa14.24□□□□□ -0.13
HDAC4-212ENST00000495497 OR4B1Q8NGF8 309 aa14.24□□□□□ -0.13
HDAC4-212ENST00000495497 SLC50A1Q9BRV3 221 aa14.24□□□□□ -0.13
HDAC4-212ENST00000495497 PAXXQ9BUH6 204 aa14.24□□□□□ -0.13
HDAC4-212ENST00000495497 TRBV19A0A075B6N1 114 aa14.23□□□□□ -0.13
HDAC4-212ENST00000495497 A0A0D9SG52 128 aa14.23□□□□□ -0.13
HDAC4-212ENST00000495497 HMGB3O15347 200 aaKnown RBP14.23□□□□□ -0.13
HDAC4-212ENST00000495497 OR7C2O60412 319 aa14.23□□□□□ -0.13
HDAC4-212ENST00000495497 NDUFB4O95168 129 aa14.23□□□□□ -0.13
HDAC4-212ENST00000495497 GIG44P09565 113 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-212ENST00000495497 GUK1Q16774 197 aa14.23□□□□□ -0.13
HDAC4-212ENST00000495497 FXYD5Q96DB9 178 aa14.23□□□□□ -0.13
HDAC4-212ENST00000495497 GNPNAT1Q96EK6 184 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-212ENST00000495497 A0A1W2PPV4 95 aa14.22□□□□□ -0.13
HDAC4-212ENST00000495497 FXYD7P58549 80 aa14.22□□□□□ -0.13
HDAC4-212ENST00000495497 Q6ZWC4 215 aa14.22□□□□□ -0.13
HDAC4-212ENST00000495497 TMUB2Q71RG4 321 aa14.22□□□□□ -0.13
HDAC4-212ENST00000495497 RPP25LQ8N5L8 163 aaKnown RBP14.22□□□□□ -0.13
HDAC4-212ENST00000495497 RNF141Q8WVD5 230 aa14.22□□□□□ -0.13
HDAC4-212ENST00000495497 NBEAL2Q6ZNJ1 2754 aa14.22□□□□□ -0.13
HDAC4-212ENST00000495497 PRAC2D3DTV9 90 aa14.21□□□□□ -0.13
HDAC4-212ENST00000495497 BCL2L11O43521 198 aa14.21□□□□□ -0.13
HDAC4-212ENST00000495497 SPRY2O43597 315 aa14.21□□□□□ -0.13
HDAC4-212ENST00000495497 C1QBP02746 253 aa14.21□□□□□ -0.13
HDAC4-212ENST00000495497 SPP1P10451 314 aa14.21□□□□□ -0.13
HDAC4-212ENST00000495497 SERF2P84101 59 aa14.21□□□□□ -0.13
HDAC4-212ENST00000495497 KHDC3LQ587J8 217 aa14.21□□□□□ -0.13
HDAC4-212ENST00000495497 MORN3Q6PF18 240 aaPredicted RBP14.21□□□□□ -0.13
HDAC4-212ENST00000495497 RPUSD4Q96CM3 377 aaKnown RBP14.21□□□□□ -0.13
HDAC4-212ENST00000495497 RNF183Q96D59 192 aa14.21□□□□□ -0.13
HDAC4-212ENST00000495497 CLEC5AQ9NY25 188 aa14.21□□□□□ -0.13
HDAC4-212ENST00000495497 KANTRA0A1W2PQU2 76 aa14.2□□□□□ -0.14
HDAC4-212ENST00000495497 NBEAP1P0C6P0 100 aa14.2□□□□□ -0.14
HDAC4-212ENST00000495497 CDC34P49427 236 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-212ENST00000495497 TAS2R45P59539 299 aa14.2□□□□□ -0.14
HDAC4-212ENST00000495497 LGALSLQ3ZCW2 172 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-212ENST00000495497 TMEM41BQ5BJD5 291 aa14.2□□□□□ -0.14
HDAC4-212ENST00000495497 EXOC3-AS1Q8N2X6 119 aa14.2□□□□□ -0.14
HDAC4-212ENST00000495497 ZNF471Q9BX82 626 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-212ENST00000495497 DNAH7Q8WXX0 4024 aa14.19□□□□□ -0.14
HDAC4-212ENST00000495497 ZNF253O75346 499 aa14.19□□□□□ -0.14
HDAC4-212ENST00000495497 MBP02144 154 aa14.19□□□□□ -0.14
HDAC4-212ENST00000495497 CNN1P51911 297 aaKnown RBP14.19□□□□□ -0.14
HDAC4-212ENST00000495497 UBE2L3P68036 154 aaKnown RBP14.19□□□□□ -0.14
HDAC4-212ENST00000495497 HIST1H1AQ02539 215 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-212ENST00000495497 SSX7Q7RTT5 188 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms