RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 SMAD5-AS1Q9Y6J3 95 aa5.69□□□□□ -1.5
VEGFA-214ENST00000493786 TEX46H3BTG2 121 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 HMGB3O15347 200 aaKnown RBP5.68□□□□□ -1.5
VEGFA-214ENST00000493786 PRB2P02812 416 aaPredicted RBP5.68□□□□□ -1.5
VEGFA-214ENST00000493786 CD7P09564 240 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 OR10J4P0C629 311 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 IGLC2P0DOY2 106 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 PYYP10082 97 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 DEFB131AP59861 70 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 PSG9Q00887 426 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 DEFA6Q01524 100 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 PDE6HQ13956 83 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 DEFB121Q5J5C9 76 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 RPP25LQ8N5L8 163 aaKnown RBP5.68□□□□□ -1.5
VEGFA-214ENST00000493786 ZNF738Q8NE65 137 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 FAM213BQ8TBF2 198 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 MRAPQ8TCY5 172 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 RNF141Q8WVD5 230 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 PHYHIPLQ96FC7 376 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 AAMDCQ9H7C9 122 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 SRD5A3Q9H8P0 318 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 MAP6D1Q9H9H5 199 aa5.68□□□□□ -1.5
VEGFA-214ENST00000493786 TRBV19A0A075B6N1 114 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 MAP1LC3B2A6NCE7 125 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 H3BTX0 84 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 MRPS12O15235 138 aaKnown RBP5.67□□□□□ -1.5
VEGFA-214ENST00000493786 ZNF253O75346 499 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 SNRPCP09234 159 aaKnown RBP5.67□□□□□ -1.5
VEGFA-214ENST00000493786 NBEAP1P0C6P0 100 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 STAG3L2P0CL84 134 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 STAG3L3P0CL85 134 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 ARL14EPLP0DKL9 152 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 GCHFRP30047 84 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 ODF3L2Q3SX64 289 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 FAM74A1Q5RGS3 127 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 EBLN2Q6P2I7 272 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 STHQ8IWL8 128 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 FAM24BQ8N5W8 94 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 DEFB125Q8N687 156 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 FAM167A-AS1Q96KT0 104 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 MAP1LC3BQ9GZQ8 125 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 ZNF331Q9NQX6 463 aaPredicted RBP5.67□□□□□ -1.5
VEGFA-214ENST00000493786 TMEM167BQ9NRX6 74 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 ZNF586Q9NXT0 402 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 NBEAL1Q6ZS30 2694 aa5.67□□□□□ -1.5
VEGFA-214ENST00000493786 NOTCH1P46531 2555 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 SORL1Q92673 2214 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 H3BQ15 152 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 K7EIL1 84 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 SOCS3O14543 225 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 EIF3GO75821 320 aaKnown RBP eCLIP5.66□□□□□ -1.5
VEGFA-214ENST00000493786 H2AFB1P0C5Y9 115 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 IGHV4-30-4P0DP06 118 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 CSN1S1P47710 185 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 SULT1A2P50226 295 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 PSG3Q16557 428 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 ACTL10Q5JWF8 245 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 ALKAL2Q6UX46 152 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 APRG1Q8IVJ8 170 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 LYPD1Q8N2G4 141 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 RNF182Q8N6D2 247 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 SFT2D1Q8WV19 159 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 FXYD5Q96DB9 178 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 C17orf77Q96MU5 243 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 WFDC10AQ9H1F0 79 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 PRELID1Q9Y255 219 aa5.66□□□□□ -1.5
VEGFA-214ENST00000493786 ZNF705EA8MWA4 302 aaPredicted RBP5.65□□□□□ -1.5
VEGFA-214ENST00000493786 SLC17A3O00476 420 aa5.65□□□□□ -1.5
VEGFA-214ENST00000493786 HBE1P02100 147 aa5.65□□□□□ -1.5
VEGFA-214ENST00000493786 FHITP49789 147 aa5.65□□□□□ -1.5
VEGFA-214ENST00000493786 PPT1P50897 306 aa5.65□□□□□ -1.5
VEGFA-214ENST00000493786 FGF8P55075 233 aaPredicted RBP5.65□□□□□ -1.5
VEGFA-214ENST00000493786 RANP62826 216 aaKnown RBP5.65□□□□□ -1.5
VEGFA-214ENST00000493786 BLOC1S1P78537 153 aa5.65□□□□□ -1.5
VEGFA-214ENST00000493786 ZNF726P1Q15940 193 aa5.65□□□□□ -1.5
VEGFA-214ENST00000493786 IGFL4Q6B9Z1 124 aa5.65□□□□□ -1.5
VEGFA-214ENST00000493786 FOXI2Q6ZQN5 318 aa5.65□□□□□ -1.5
VEGFA-214ENST00000493786 SSX7Q7RTT5 188 aa5.65□□□□□ -1.5
VEGFA-214ENST00000493786 Q8N1Y9 231 aa5.65□□□□□ -1.5
VEGFA-214ENST00000493786 OR10J6PQ8NGY7 276 aa5.65□□□□□ -1.5
VEGFA-214ENST00000493786 CMTM2Q8TAZ6 248 aa5.65□□□□□ -1.5
VEGFA-214ENST00000493786 RPUSD4Q96CM3 377 aaKnown RBP5.65□□□□□ -1.5
VEGFA-214ENST00000493786 MRPL53Q96EL3 112 aaKnown RBP5.65□□□□□ -1.5
VEGFA-214ENST00000493786 SAT2Q96F10 170 aaPredicted RBP5.65□□□□□ -1.5
VEGFA-214ENST00000493786 ZNF503Q96F45 646 aa5.65□□□□□ -1.5
VEGFA-214ENST00000493786 Q9H3A6 140 aa5.65□□□□□ -1.5
VEGFA-214ENST00000493786 C19orf73Q9NVV2 129 aa5.65□□□□□ -1.5
VEGFA-214ENST00000493786 PPP1R14DQ9NXH3 145 aa5.65□□□□□ -1.5
VEGFA-214ENST00000493786 LOC102724200A0A096LPH7 203 aaPredicted RBP5.64□□□□□ -1.51
VEGFA-214ENST00000493786 TRAV8-2A0A0B4J237 113 aa5.64□□□□□ -1.51
VEGFA-214ENST00000493786 A0A1B0GV50 99 aa5.64□□□□□ -1.51
VEGFA-214ENST00000493786 KNCNA6PVL3 124 aa5.64□□□□□ -1.51
VEGFA-214ENST00000493786 A8MZ25 164 aa5.64□□□□□ -1.51
VEGFA-214ENST00000493786 DUSP14O95147 198 aaKnown RBP5.64□□□□□ -1.51
VEGFA-214ENST00000493786 NDUFB4O95168 129 aa5.64□□□□□ -1.51
VEGFA-214ENST00000493786 IFNA7P01567 189 aa5.64□□□□□ -1.51
VEGFA-214ENST00000493786 APOC4P55056 127 aa5.64□□□□□ -1.51
VEGFA-214ENST00000493786 NUTF2P61970 127 aaKnown RBP5.64□□□□□ -1.51
VEGFA-214ENST00000493786 HIST1H1AQ02539 215 aaPredicted RBP5.64□□□□□ -1.51
VEGFA-214ENST00000493786 ICAM4Q14773 271 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms