RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 GGACTQ9BVM4 153 aa10.03□□□□□ -0.8
VTI1A-206ENST00000489142 RFNGQ9Y644 331 aa10.03□□□□□ -0.8
VTI1A-206ENST00000489142 TRAV12-2A0A075B6T6 113 aa10.02□□□□□ -0.81
VTI1A-206ENST00000489142 A0A087X0K7 114 aa10.02□□□□□ -0.81
VTI1A-206ENST00000489142 LOC102723971A0A1B0GUV8 181 aa10.02□□□□□ -0.81
VTI1A-206ENST00000489142 SMIM9A6NGZ8 99 aa10.02□□□□□ -0.81
VTI1A-206ENST00000489142 A8MTW9 85 aa10.02□□□□□ -0.81
VTI1A-206ENST00000489142 MRPS12O15235 138 aaKnown RBP10.02□□□□□ -0.81
VTI1A-206ENST00000489142 UPK1BO75841 260 aa10.02□□□□□ -0.81
VTI1A-206ENST00000489142 CXCL3P19876 107 aa10.02□□□□□ -0.81
VTI1A-206ENST00000489142 CAMLGP49069 296 aa10.02□□□□□ -0.81
VTI1A-206ENST00000489142 BIRC6Q9NR09 4857 aa10.01□□□□□ -0.81
VTI1A-206ENST00000489142 TRAV5A0A0B4J249 113 aa10.01□□□□□ -0.81
VTI1A-206ENST00000489142 ZNF705GA8MUZ8 300 aaPredicted RBP10.01□□□□□ -0.81
VTI1A-206ENST00000489142 SLC17A3O00476 420 aa10.01□□□□□ -0.81
VTI1A-206ENST00000489142 CRXO43186 299 aaPredicted RBP10.01□□□□□ -0.81
VTI1A-206ENST00000489142 DUSP14O95147 198 aaKnown RBP10.01□□□□□ -0.81
VTI1A-206ENST00000489142 HBE1P02100 147 aa10.01□□□□□ -0.81
VTI1A-206ENST00000489142 SPART-AS1P0CW21 52 aa10.01□□□□□ -0.81
VTI1A-206ENST00000489142 PVALBP20472 110 aaPredicted RBP10.01□□□□□ -0.81
VTI1A-206ENST00000489142 BAXQ07812 192 aa10.01□□□□□ -0.81
VTI1A-206ENST00000489142 IL15RAQ13261 267 aa10.01□□□□□ -0.81
VTI1A-206ENST00000489142 OPCMLQ14982 345 aa10.01□□□□□ -0.81
VTI1A-206ENST00000489142 C10orf113Q5VZT2 155 aa10.01□□□□□ -0.81
VTI1A-206ENST00000489142 LINC00299Q6ZSB3 139 aa10.01□□□□□ -0.81
VTI1A-206ENST00000489142 IGF2BP2-AS1Q96M15 143 aa10.01□□□□□ -0.81
VTI1A-206ENST00000489142 LYRM2Q9NU23 88 aaPredicted RBP10.01□□□□□ -0.81
VTI1A-206ENST00000489142 UQCC1Q9NVA1 299 aa10.01□□□□□ -0.81
VTI1A-206ENST00000489142 DKK2Q9UBU2 259 aa10.01□□□□□ -0.81
VTI1A-206ENST00000489142 YTHDF2Q9Y5A9 579 aaKnown RBP10.01□□□□□ -0.81
VTI1A-206ENST00000489142 TMEM189A5PLL7 270 aa10□□□□□ -0.81
VTI1A-206ENST00000489142 BOLA2-SMG1P6H3BVE0 249 aa10□□□□□ -0.81
VTI1A-206ENST00000489142 INSP01308 110 aa10□□□□□ -0.81
VTI1A-206ENST00000489142 HTN3P15516 51 aa10□□□□□ -0.81
VTI1A-206ENST00000489142 SULT1A1P50225 295 aa10□□□□□ -0.81
VTI1A-206ENST00000489142 TCTAP57738 103 aa10□□□□□ -0.81
VTI1A-206ENST00000489142 RHOBP62745 196 aa10□□□□□ -0.81
VTI1A-206ENST00000489142 PSG3Q16557 428 aa10□□□□□ -0.81
VTI1A-206ENST00000489142 RRN3P1Q2M238 152 aa10□□□□□ -0.81
VTI1A-206ENST00000489142 PXDC1Q5TGL8 231 aa10□□□□□ -0.81
VTI1A-206ENST00000489142 S100A7AQ86SG5 101 aa10□□□□□ -0.81
VTI1A-206ENST00000489142 TMEM252Q8N6L7 170 aa10□□□□□ -0.81
VTI1A-206ENST00000489142 OR8A1Q8NGG7 326 aa10□□□□□ -0.81
VTI1A-206ENST00000489142 RNF126Q9BV68 326 aa10□□□□□ -0.81
VTI1A-206ENST00000489142 WDR83OSQ9Y284 106 aa10□□□□□ -0.81
VTI1A-206ENST00000489142 FGF7P21781 194 aa9.99□□□□□ -0.81
VTI1A-206ENST00000489142 VWC2Q2TAL6 325 aa9.99□□□□□ -0.81
VTI1A-206ENST00000489142 LRRC37A5PQ49AS3 106 aa9.99□□□□□ -0.81
VTI1A-206ENST00000489142 STX12Q86Y82 276 aa9.99□□□□□ -0.81
VTI1A-206ENST00000489142 BPIFA4PQ86YQ2 179 aa9.99□□□□□ -0.81
VTI1A-206ENST00000489142 RPUSD4Q96CM3 377 aaKnown RBP9.99□□□□□ -0.81
VTI1A-206ENST00000489142 NIPSNAP3BQ9BS92 247 aa9.99□□□□□ -0.81
VTI1A-206ENST00000489142 PARD6GQ9BYG4 376 aaPredicted RBP9.99□□□□□ -0.81
VTI1A-206ENST00000489142 GPN1Q9HCN4 374 aaPredicted RBP9.99□□□□□ -0.81
VTI1A-206ENST00000489142 DNAJC4Q9NNZ3 241 aa9.99□□□□□ -0.81
VTI1A-206ENST00000489142 PPP1R14DQ9NXH3 145 aa9.99□□□□□ -0.81
VTI1A-206ENST00000489142 PTTG2Q9NZH5 202 aa9.99□□□□□ -0.81
VTI1A-206ENST00000489142 VPS13DQ5THJ4 4388 aa9.99□□□□□ -0.81
VTI1A-206ENST00000489142 PRAC2D3DTV9 90 aa9.98□□□□□ -0.81
VTI1A-206ENST00000489142 H3BQ15 152 aa9.98□□□□□ -0.81
VTI1A-206ENST00000489142 AMBPP02760 352 aa9.98□□□□□ -0.81
VTI1A-206ENST00000489142 RAB31Q13636 194 aa9.98□□□□□ -0.81
VTI1A-206ENST00000489142 LCN15Q6UWW0 184 aa9.98□□□□□ -0.81
VTI1A-206ENST00000489142 Q6ZRG5 221 aa9.98□□□□□ -0.81
VTI1A-206ENST00000489142 ZNF331Q9NQX6 463 aaPredicted RBP9.98□□□□□ -0.81
VTI1A-206ENST00000489142 SLC39A9Q9NUM3 307 aa9.98□□□□□ -0.81
VTI1A-206ENST00000489142 OR5AC2Q9NZP5 309 aa9.98□□□□□ -0.81
VTI1A-206ENST00000489142 IGLC2P0DOY2 106 aa9.97□□□□□ -0.81
VTI1A-206ENST00000489142 AZU1P20160 251 aa9.97□□□□□ -0.81
VTI1A-206ENST00000489142 S100A11P31949 105 aa9.97□□□□□ -0.81
VTI1A-206ENST00000489142 B2MP61769 119 aa9.97□□□□□ -0.81
VTI1A-206ENST00000489142 HBG1P69891 147 aa9.97□□□□□ -0.81
VTI1A-206ENST00000489142 HBG2P69892 147 aa9.97□□□□□ -0.81
VTI1A-206ENST00000489142 NHLH2Q02577 135 aa9.97□□□□□ -0.81
VTI1A-206ENST00000489142 KIR3DS1Q14943 382 aa9.97□□□□□ -0.81
VTI1A-206ENST00000489142 THAP6Q8TBB0 222 aa9.97□□□□□ -0.81
VTI1A-206ENST00000489142 SLC50A1Q9BRV3 221 aa9.97□□□□□ -0.81
VTI1A-206ENST00000489142 NDUFAF3Q9BU61 184 aa9.97□□□□□ -0.81
VTI1A-206ENST00000489142 PXMP4Q9Y6I8 212 aa9.97□□□□□ -0.81
VTI1A-206ENST00000489142 INMT-MINDY4F8WBC2 141 aa9.96□□□□□ -0.82
VTI1A-206ENST00000489142 HTN1P15515 57 aa9.96□□□□□ -0.82
VTI1A-206ENST00000489142 CXCL2P19875 107 aa9.96□□□□□ -0.82
VTI1A-206ENST00000489142 DAD1P61803 113 aa9.96□□□□□ -0.82
VTI1A-206ENST00000489142 FCN2Q15485 313 aa9.96□□□□□ -0.82
VTI1A-206ENST00000489142 GCSAMLQ5JQS6 135 aa9.96□□□□□ -0.82
VTI1A-206ENST00000489142 OR1L4Q8NGR5 311 aa9.96□□□□□ -0.82
VTI1A-206ENST00000489142 LINC01587Q99440 93 aa9.96□□□□□ -0.82
VTI1A-206ENST00000489142 RNF24Q9Y225 148 aa9.96□□□□□ -0.82
VTI1A-206ENST00000489142 DNAH6Q9C0G6 4158 aa9.95□□□□□ -0.82
VTI1A-206ENST00000489142 H0YIZ8 118 aa9.95□□□□□ -0.82
VTI1A-206ENST00000489142 J3KRW8 73 aa9.95□□□□□ -0.82
VTI1A-206ENST00000489142 RPL29P47914 159 aaKnown RBP9.95□□□□□ -0.82
VTI1A-206ENST00000489142 CLINT1Q14677 625 aa9.95□□□□□ -0.82
VTI1A-206ENST00000489142 OR5C1Q8NGR4 320 aa9.95□□□□□ -0.82
VTI1A-206ENST00000489142 SAT2Q96F10 170 aaPredicted RBP9.95□□□□□ -0.82
VTI1A-206ENST00000489142 PFDN5Q99471 154 aa9.95□□□□□ -0.82
VTI1A-206ENST00000489142 NPCDR1Q9BY65 106 aa9.95□□□□□ -0.82
VTI1A-206ENST00000489142 ZNF586Q9NXT0 402 aa9.95□□□□□ -0.82
VTI1A-206ENST00000489142 TEX48A0A1B0GUV7 120 aa9.94□□□□□ -0.82
VTI1A-206ENST00000489142 PLAC8L1A1L4L8 177 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms