RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 ZNF876PQ49A33 203 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 GTSCR1Q86UQ5 136 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 ZNF747Q9BV97 191 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 C20orf204Q6ZNR8 217 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 CD177Q8N6Q3 437 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 BMPERQ8N8U9 685 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 FGFBP3Q8TAT2 258 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 PRO1854Q9UHT4 67 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 hDV102S1A0JD36 115 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 C9orf172C9J069 976 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 SH2D1AO60880 128 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 HLA-DRB4P13762 266 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 FAM110DQ8TAY7 271 aaPredicted RBP4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 SSC4DQ8WTU2 575 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 PRR25Q96S07 402 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 TIMM21Q9BVV7 248 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 HLA-DRB4X5D2U9 266 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 FOCADQ5VW36 1801 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 A6NNC1 897 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 ZNF415Q09FC8 603 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 C15orf32Q32M92 178 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 IGHV3-35A0A0C4DH35 117 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 A0A1W2PPM0 123 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 GAGE12HA6NDE8 117 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 BVES-AS1Q5T3Y7 98 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 COL4A5P29400 1685 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 ATG2BQ96BY7 2078 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 IGLV3-9A0A075B6K5 115 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 ARMS2P0C7Q2 107 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 GATA3P23771 443 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 TMEM95Q3KNT9 176 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 C10orf55Q5SWW7 151 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 Q6ZS92 163 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 TRGV2A0A075B6R0 118 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 IGKV1D-17A0A075B6S4 117 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 COX6B1P14854 86 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 LINC01587Q99440 93 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 JPT2Q9H910 190 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 CSPG4Q6UVK1 2322 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 ECM29Q5VYK3 1845 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 IGLC7A0M8Q6 106 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 IGKV1-39P01597 117 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 IGKV1D-39P04432 117 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 TRIP12Q14669 1992 aaPredicted RBP4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 IGHV3OR16-13A0A075B7E8 117 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 IGHV3-74A0A0B4J1X5 117 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 THBDP07204 575 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 SIGLEC8Q9NYZ4 499 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 UBR3Q6ZT12 1888 aa4.98□□□□□ -1.61
PRPF4B-205ENST00000480058 LEPROTO15243 131 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 CELA3BP08861 270 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 ZNF726P1Q15940 193 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 VMO1Q7Z5L0 202 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 STPG4Q8N801 248 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 DAZ1Q9NQZ3 744 aaKnown RBP4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 TOMM7Q9P0U1 55 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 KIAA1217Q5T5P2 1943 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 A0A1W2PPI3 338 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 ZNF672Q499Z4 452 aaPredicted RBP4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 FAM201AQ5SY85 155 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 GLMPQ8WWB7 406 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 FAM168AQ92567 244 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 ZNF48Q96MX3 618 aaPredicted RBP4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 C7orf69Q9H7B7 122 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 TRBV6-1A0A0K0K1D8 114 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 SOCS3O14543 225 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 NPYP01303 97 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 CD33P20138 364 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 RHOHQ15669 191 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 GBF1Q92538 1859 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 SRRM4A7MD48 611 aaKnown RBP4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 GAFA1Q96PS6 74 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 PRADC1Q9BSG0 188 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 ARFGEF1Q9Y6D6 1849 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 DOCK9Q9BZ29 2069 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 RBAKDNA6NC62 111 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 H3BUA1 57 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 IGHG4P01861 327 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 GAGE5Q13069 117 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 GAGE6Q13070 117 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 EXOC3-AS1Q8N2X6 119 aa4.97□□□□□ -1.61
PRPF4B-205ENST00000480058 C9JAW5 83 aa4.96□□□□□ -1.61
PRPF4B-205ENST00000480058 BUB1B-PAK6H3BSN5 160 aa4.96□□□□□ -1.61
PRPF4B-205ENST00000480058 RPL32P62910 135 aaKnown RBP4.96□□□□□ -1.61
PRPF4B-205ENST00000480058 TMEM200BQ69YZ2 307 aa4.96□□□□□ -1.61
PRPF4B-205ENST00000480058 PRIMA1Q86XR5 153 aa4.96□□□□□ -1.61
PRPF4B-205ENST00000480058 ARHGEF17Q96PE2 2063 aaPredicted RBP4.96□□□□□ -1.61
PRPF4B-205ENST00000480058 NPSP0C0P6 89 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 RNASE4P34096 147 aaKnown RBP4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 IGFBPL1Q8WX77 278 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 DMRTA2Q96SC8 542 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 UBL5Q9BZL1 73 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 SRD5A1P18405 259 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 EVI2AP22794 236 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 TEX36Q5VZQ5 186 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 ZNF833PQ6ZTB9 187 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 UBE2WQ96B02 151 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 SPXQ9BT56 116 aa4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 TNS1Q9HBL0 1735 aaKnown RBP4.96□□□□□ -1.62
PRPF4B-205ENST00000480058 DOCK4Q8N1I0 1966 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms